Protein–RNA interactions for Protein: P48960

CD97, CD97 antigen, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD97P48960 MIR1323-201ENST00000408090 73 ntBASIC1.48□□□□□ -2.17
CD97P48960 MIR1827-201ENST00000408549 66 ntBASIC1.48□□□□□ -2.17
CD97P48960 RNU6-955P-201ENST00000410497 104 ntBASIC1.48□□□□□ -2.17
CD97P48960 AC002350.1-201ENST00000490759 375 ntBASIC1.48□□□□□ -2.17
CD97P48960 RNU5B-6P-201ENST00000516765 68 ntBASIC1.48□□□□□ -2.17
CD97P48960 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.48□□□□□ -2.17
CD97P48960 MIR4639-201ENST00000584938 69 ntBASIC1.48□□□□□ -2.17
CD97P48960 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
CD97P48960 SNORD28-201ENST00000384706 75 ntBASIC1.47□□□□□ -2.17
CD97P48960 SNORD79.1-201ENST00000516069 84 ntBASIC1.47□□□□□ -2.17
CD97P48960 RNU6-135P-201ENST00000516769 101 ntBASIC1.47□□□□□ -2.17
CD97P48960 MIR4421-201ENST00000578133 69 ntBASIC1.47□□□□□ -2.17
CD97P48960 SNORD114-26-201ENST00000363543 72 ntBASIC1.46□□□□□ -2.18
CD97P48960 SNORA33.1-201ENST00000364957 130 ntBASIC1.46□□□□□ -2.18
CD97P48960 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.46□□□□□ -2.18
CD97P48960 RNU7-119P-201ENST00000459279 63 ntBASIC1.46□□□□□ -2.18
CD97P48960 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.46□□□□□ -2.18
CD97P48960 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.46□□□□□ -2.18
CD97P48960 Y_RNA.125-201ENST00000363371 111 ntBASIC1.45□□□□□ -2.18
CD97P48960 RNU6-726P-201ENST00000364680 107 ntBASIC1.45□□□□□ -2.18
CD97P48960 SNORA41B-201ENST00000384785 128 ntBASIC1.45□□□□□ -2.18
CD97P48960 SNORA67.6-201ENST00000391093 99 ntBASIC1.45□□□□□ -2.18
CD97P48960 RNU6-469P-201ENST00000516253 101 ntBASIC1.45□□□□□ -2.18
CD97P48960 RNU6-980P-201ENST00000516925 103 ntBASIC1.45□□□□□ -2.18
CD97P48960 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.45□□□□□ -2.18
CD97P48960 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.45□□□□□ -2.18
CD97P48960 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CD97P48960 SNORD114-22-201ENST00000365423 72 ntBASIC1.44□□□□□ -2.18
CD97P48960 RNU6-716P-201ENST00000365621 103 ntBASIC1.44□□□□□ -2.18
CD97P48960 SNORA15B-2-201ENST00000384058 135 ntBASIC1.44□□□□□ -2.18
CD97P48960 SNORA15B-1-201ENST00000384334 135 ntBASIC1.44□□□□□ -2.18
CD97P48960 RNU6-35P-201ENST00000384530 107 ntBASIC1.44□□□□□ -2.18
CD97P48960 MIR517C-201ENST00000385103 95 ntBASIC1.44□□□□□ -2.18
CD97P48960 RNU6-231P-201ENST00000517122 103 ntBASIC1.44□□□□□ -2.18
CD97P48960 MIR6734-201ENST00000621166 68 ntBASIC1.44□□□□□ -2.18
CD97P48960 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
CD97P48960 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
CD97P48960 Y_RNA.246-201ENST00000364495 108 ntBASIC1.42□□□□□ -2.18
CD97P48960 Y_RNA.325-201ENST00000365171 122 ntBASIC1.42□□□□□ -2.18
CD97P48960 MIR758-201ENST00000390227 88 ntBASIC1.42□□□□□ -2.18
CD97P48960 RPS29P23-201ENST00000458635 123 ntBASIC1.42□□□□□ -2.18
CD97P48960 RNA5SP484-201ENST00000458857 111 ntBASIC1.42□□□□□ -2.18
CD97P48960 Y_RNA.633-201ENST00000459107 95 ntBASIC1.42□□□□□ -2.18
CD97P48960 SNORA31.24-201ENST00000517232 57 ntBASIC1.42□□□□□ -2.18
CD97P48960 AC022709.1-201ENST00000615967 87 ntBASIC1.42□□□□□ -2.18
CD97P48960 SNORA9.1-201ENST00000362412 131 ntBASIC1.41□□□□□ -2.18
CD97P48960 SNORD18A-201ENST00000363753 72 ntBASIC1.41□□□□□ -2.18
CD97P48960 SNORA63.6-201ENST00000364921 119 ntBASIC1.41□□□□□ -2.18
CD97P48960 RNU6-1246P-201ENST00000391064 107 ntBASIC1.41□□□□□ -2.18
CD97P48960 RNU6-269P-201ENST00000391077 97 ntBASIC1.41□□□□□ -2.18
CD97P48960 AL353770.2-201ENST00000620024 78 ntBASIC1.41□□□□□ -2.18
CD97P48960 SNORA8.2-201ENST00000384372 139 ntBASIC1.4□□□□□ -2.19
CD97P48960 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.4□□□□□ -2.19
CD97P48960 RNU1-92P-201ENST00000517017 135 ntBASIC1.4□□□□□ -2.19
CD97P48960 RNA5SP47-201ENST00000517230 109 ntBASIC1.4□□□□□ -2.19
CD97P48960 RNU4-33P-201ENST00000364316 85 ntBASIC1.39□□□□□ -2.19
CD97P48960 RNU6-930P-201ENST00000390938 100 ntBASIC1.39□□□□□ -2.19
CD97P48960 SNORD116.2-201ENST00000391251 93 ntBASIC1.39□□□□□ -2.19
CD97P48960 MIR6779-201ENST00000617283 64 ntBASIC1.39□□□□□ -2.19
CD97P48960 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.38□□□□□ -2.19
CD97P48960 SCARNA17.3-201ENST00000516381 125 ntBASIC1.38□□□□□ -2.19
CD97P48960 RNA5SP61-201ENST00000516453 100 ntBASIC1.38□□□□□ -2.19
CD97P48960 SNORA70.22-201ENST00000517160 124 ntBASIC1.38□□□□□ -2.19
CD97P48960 MIR652-201ENST00000385278 98 ntBASIC1.37□□□□□ -2.19
CD97P48960 AL354695.1-201ENST00000427935 228 ntBASIC1.37□□□□□ -2.19
CD97P48960 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
CD97P48960 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CD97P48960 SNORA25.8-201ENST00000364831 128 ntBASIC1.36□□□□□ -2.19
CD97P48960 MIR582-201ENST00000365731 98 ntBASIC1.36□□□□□ -2.19
CD97P48960 SNORD89-201ENST00000390981 114 ntBASIC1.36□□□□□ -2.19
CD97P48960 SNORD12-201ENST00000391002 90 ntBASIC1.36□□□□□ -2.19
CD97P48960 MIR1304-201ENST00000408243 91 ntBASIC1.36□□□□□ -2.19
CD97P48960 SNORA40.16-201ENST00000517238 121 ntBASIC1.36□□□□□ -2.19
CD97P48960 MIR6078-201ENST00000611069 100 ntBASIC1.36□□□□□ -2.19
CD97P48960 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.36□□□□□ -2.19
CD97P48960 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CD97P48960 Y_RNA.407-201ENST00000383986 113 ntBASIC1.35□□□□□ -2.19
CD97P48960 MIR3678-201ENST00000578455 94 ntBASIC1.35□□□□□ -2.19
CD97P48960 MIR6515-201ENST00000619843 57 ntBASIC1.35□□□□□ -2.19
CD97P48960 PVT1_3.1-201ENST00000620853 95 ntBASIC1.35□□□□□ -2.19
CD97P48960 MIR96-201ENST00000362288 78 ntBASIC1.34□□□□□ -2.19
CD97P48960 RNA5SP325-201ENST00000363756 130 ntBASIC1.34□□□□□ -2.19
CD97P48960 RNU1-93P-201ENST00000364704 169 ntBASIC1.34□□□□□ -2.19
CD97P48960 MIR222-201ENST00000384992 110 ntBASIC1.34□□□□□ -2.19
CD97P48960 SNORD105-201ENST00000386910 85 ntBASIC1.34□□□□□ -2.19
CD97P48960 MIR548E-201ENST00000408287 88 ntBASIC1.34□□□□□ -2.19
CD97P48960 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.34□□□□□ -2.19
CD97P48960 SCARNA16.5-201ENST00000517114 183 ntBASIC1.34□□□□□ -2.19
CD97P48960 MIR548AE1-201ENST00000583292 70 ntBASIC1.34□□□□□ -2.19
CD97P48960 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.33□□□□□ -2.2
CD97P48960 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.33□□□□□ -2.2
CD97P48960 SNORD116-16-201ENST00000384533 92 ntBASIC1.33□□□□□ -2.2
CD97P48960 AC002429.1-201ENST00000437672 148 ntBASIC1.33□□□□□ -2.2
CD97P48960 U7.7-201ENST00000459276 60 ntBASIC1.33□□□□□ -2.2
CD97P48960 RNU6-518P-201ENST00000516056 96 ntBASIC1.33□□□□□ -2.2
CD97P48960 CYP3A54P-201ENST00000566950 75 ntBASIC1.33□□□□□ -2.2
CD97P48960 MIR4473-201ENST00000583731 91 ntBASIC1.33□□□□□ -2.2
CD97P48960 MIR7110-201ENST00000612638 86 ntBASIC1.33□□□□□ -2.2
CD97P48960 RNU6-1110P-201ENST00000516462 101 ntBASIC1.32□□□□□ -2.2
CD97P48960 AL162376.1-201ENST00000624117 175 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 203 ms