Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 MIR593-201ENST00000384856 100 ntBASIC0.07□□□□□ -2.4
HNF4AP41235 MIR610-201ENST00000385139 96 ntBASIC0.07□□□□□ -2.4
HNF4AP41235 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
HNF4AP41235 RNU6-762P-201ENST00000517107 102 ntBASIC0.07□□□□□ -2.4
HNF4AP41235 MIR6718-201ENST00000616153 80 ntBASIC0.07□□□□□ -2.4
HNF4AP41235 RNY4P3-201ENST00000365254 95 ntBASIC0.06□□□□□ -2.4
HNF4AP41235 MIR145-201ENST00000384967 88 ntBASIC0.06□□□□□ -2.4
HNF4AP41235 MIR876-201ENST00000401147 81 ntBASIC0.06□□□□□ -2.4
HNF4AP41235 RNU7-188P-201ENST00000517063 64 ntBASIC0.06□□□□□ -2.4
HNF4AP41235 AC023932.2-201ENST00000603176 175 ntBASIC0.06□□□□□ -2.4
HNF4AP41235 MIR8087-201ENST00000612745 78 ntBASIC0.06□□□□□ -2.4
HNF4AP41235 RN7SL660P-201ENST00000614852 299 ntBASIC0.06□□□□□ -2.4
HNF4AP41235 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.05□□□□□ -2.4
HNF4AP41235 Y_RNA.258-201ENST00000364613 105 ntBASIC0.05□□□□□ -2.4
HNF4AP41235 RNU6-497P-201ENST00000365316 104 ntBASIC0.05□□□□□ -2.4
HNF4AP41235 Y_RNA.540-201ENST00000384638 111 ntBASIC0.05□□□□□ -2.4
HNF4AP41235 RNU6-1177P-201ENST00000391058 104 ntBASIC0.05□□□□□ -2.4
HNF4AP41235 Y_RNA.694-201ENST00000516677 117 ntBASIC0.05□□□□□ -2.4
HNF4AP41235 Y_RNA.17-201ENST00000362433 111 ntBASIC0.04□□□□□ -2.4
HNF4AP41235 SNORD114-5-201ENST00000362928 70 ntBASIC0.04□□□□□ -2.4
HNF4AP41235 RNU6-495P-201ENST00000362995 107 ntBASIC0.04□□□□□ -2.4
HNF4AP41235 SNORD114-26-201ENST00000363543 72 ntBASIC0.04□□□□□ -2.4
HNF4AP41235 RNU6-675P-201ENST00000384236 104 ntBASIC0.03□□□□□ -2.4
HNF4AP41235 SNORA75.1-201ENST00000391130 148 ntBASIC0.03□□□□□ -2.4
HNF4AP41235 MIR1197-201ENST00000408818 88 ntBASIC0.03□□□□□ -2.4
HNF4AP41235 RNA5SP163-201ENST00000410304 99 ntBASIC0.03□□□□□ -2.4
HNF4AP41235 RNU6-175P-201ENST00000516896 107 ntBASIC0.03□□□□□ -2.4
HNF4AP41235 MIR548BB-201ENST00000626714 66 ntBASIC0.03□□□□□ -2.4
HNF4AP41235 MIR330-201ENST00000362196 94 ntBASIC0.02□□□□□ -2.41
HNF4AP41235 SNORD114-16-201ENST00000363044 70 ntBASIC0.02□□□□□ -2.41
HNF4AP41235 RNU6-1134P-201ENST00000365156 101 ntBASIC0.02□□□□□ -2.41
HNF4AP41235 MIR7-2-201ENST00000384970 110 ntBASIC0.02□□□□□ -2.41
HNF4AP41235 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
HNF4AP41235 Y_RNA.593-201ENST00000410292 98 ntBASIC0.02□□□□□ -2.41
HNF4AP41235 AC093729.1-201ENST00000513074 128 ntBASIC0.02□□□□□ -2.41
HNF4AP41235 SCARNA17.3-201ENST00000516381 125 ntBASIC0.02□□□□□ -2.41
HNF4AP41235 RNU6-180P-201ENST00000516697 61 ntBASIC0.02□□□□□ -2.41
HNF4AP41235 MIR5582-201ENST00000579697 68 ntBASIC0.02□□□□□ -2.41
HNF4AP41235 MIR4743-201ENST00000584576 69 ntBASIC0.02□□□□□ -2.41
HNF4AP41235 MIR6779-201ENST00000617283 64 ntBASIC0.02□□□□□ -2.41
HNF4AP41235 RNU6-1298P-201ENST00000362456 101 ntBASIC0.01□□□□□ -2.41
HNF4AP41235 RNU6-824P-201ENST00000363724 104 ntBASIC0.01□□□□□ -2.41
HNF4AP41235 SNORD114-29-201ENST00000364819 70 ntBASIC0.01□□□□□ -2.41
HNF4AP41235 MIR892B-201ENST00000401279 77 ntBASIC0.01□□□□□ -2.41
HNF4AP41235 AC097510.1-201ENST00000510945 133 ntBASIC0.01□□□□□ -2.41
HNF4AP41235 MIR4290-201ENST00000583807 95 ntBASIC0.01□□□□□ -2.41
HNF4AP41235 RNU5F-1-201ENST00000362507 117 ntBASIC0□□□□□ -2.41
HNF4AP41235 Y_RNA.115-201ENST00000363272 98 ntBASIC0□□□□□ -2.41
HNF4AP41235 SNORD115-37-201ENST00000363768 82 ntBASIC0□□□□□ -2.41
HNF4AP41235 RNU6-382P-201ENST00000365181 106 ntBASIC0□□□□□ -2.41
HNF4AP41235 MIR106A-201ENST00000384870 81 ntBASIC0□□□□□ -2.41
HNF4AP41235 RNA5SP63-201ENST00000391225 112 ntBASIC0□□□□□ -2.41
HNF4AP41235 Y_RNA.611-201ENST00000410682 108 ntBASIC0□□□□□ -2.41
HNF4AP41235 RNU7-165P-201ENST00000458864 60 ntBASIC0□□□□□ -2.41
HNF4AP41235 AC140658.3-201ENST00000567603 271 ntBASIC0□□□□□ -2.41
HNF4AP41235 MIR20A-201ENST00000362279 71 ntBASIC-0.01□□□□□ -2.41
HNF4AP41235 RNU6-624P-201ENST00000363411 107 ntBASIC-0.01□□□□□ -2.41
HNF4AP41235 SNORD114-4-201ENST00000363962 75 ntBASIC-0.01□□□□□ -2.41
HNF4AP41235 MIR582-201ENST00000365731 98 ntBASIC-0.01□□□□□ -2.41
HNF4AP41235 SNORD75.2-201ENST00000408784 58 ntBASIC-0.01□□□□□ -2.41
HNF4AP41235 RNU7-24P-201ENST00000458867 62 ntBASIC-0.01□□□□□ -2.41
HNF4AP41235 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.01□□□□□ -2.41
HNF4AP41235 RNA5SP330-201ENST00000517096 96 ntBASIC-0.01□□□□□ -2.41
HNF4AP41235 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.01□□□□□ -2.41
HNF4AP41235 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
HNF4AP41235 MIR4768-201ENST00000585270 74 ntBASIC-0.01□□□□□ -2.41
HNF4AP41235 MIR6514-201ENST00000622549 70 ntBASIC-0.01□□□□□ -2.41
HNF4AP41235 MIR371B-201ENST00000638082 66 ntBASIC-0.01□□□□□ -2.41
HNF4AP41235 RNU6-294P-201ENST00000364999 102 ntBASIC-0.02□□□□□ -2.41
HNF4AP41235 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.02□□□□□ -2.41
HNF4AP41235 RNU6-929P-201ENST00000384429 107 ntBASIC-0.02□□□□□ -2.41
HNF4AP41235 AC244090.1-201ENST00000441884 93 ntBASIC-0.02□□□□□ -2.41
HNF4AP41235 CR383656.4-201ENST00000546909 122 ntBASIC-0.02□□□□□ -2.41
HNF4AP41235 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.03□□□□□ -2.41
HNF4AP41235 RNU7-159P-201ENST00000459284 62 ntBASIC-0.03□□□□□ -2.41
HNF4AP41235 IGLL4P-201ENST00000614590 133 ntBASIC-0.03□□□□□ -2.41
HNF4AP41235 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.03□□□□□ -2.41
HNF4AP41235 MIR4773-1-201ENST00000637203 78 ntBASIC-0.03□□□□□ -2.41
HNF4AP41235 RNU6-208P-201ENST00000362431 107 ntBASIC-0.04□□□□□ -2.42
HNF4AP41235 RNY1P1-201ENST00000364372 112 ntBASIC-0.04□□□□□ -2.42
HNF4AP41235 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.04□□□□□ -2.42
HNF4AP41235 MIR548E-201ENST00000408287 88 ntBASIC-0.04□□□□□ -2.42
HNF4AP41235 AL450471.1-201ENST00000447509 127 ntBASIC-0.04□□□□□ -2.42
HNF4AP41235 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.04□□□□□ -2.42
HNF4AP41235 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.04□□□□□ -2.42
HNF4AP41235 RNA5SP170-201ENST00000517150 101 ntBASIC-0.04□□□□□ -2.42
HNF4AP41235 AC006254.2-201ENST00000603259 279 ntBASIC-0.04□□□□□ -2.42
HNF4AP41235 AC006160.2-201ENST00000637708 154 ntBASIC-0.04□□□□□ -2.42
HNF4AP41235 RNU6-990P-201ENST00000364385 104 ntBASIC-0.05□□□□□ -2.42
HNF4AP41235 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.05□□□□□ -2.42
HNF4AP41235 SNORD77.2-201ENST00000391045 68 ntBASIC-0.05□□□□□ -2.42
HNF4AP41235 U6.81-201ENST00000612550 106 ntBASIC-0.05□□□□□ -2.42
HNF4AP41235 RNU6-302P-201ENST00000365249 107 ntBASIC-0.06□□□□□ -2.42
HNF4AP41235 SNORA49-201ENST00000386157 136 ntBASIC-0.06□□□□□ -2.42
HNF4AP41235 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.06□□□□□ -2.42
HNF4AP41235 RNU6-592P-201ENST00000411333 103 ntBASIC-0.06□□□□□ -2.42
HNF4AP41235 SNORA40.17-201ENST00000517256 115 ntBASIC-0.06□□□□□ -2.42
HNF4AP41235 MIR5190-201ENST00000581537 80 ntBASIC-0.06□□□□□ -2.42
HNF4AP41235 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.06□□□□□ -2.42
HNF4AP41235 MIR6507-201ENST00000613630 70 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 297.5 ms