Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SNORD114-12-201ENST00000365400 75 ntBASIC-0.33□□□□□ -2.46
HMGCLP35914 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.33□□□□□ -2.46
HMGCLP35914 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.33□□□□□ -2.46
HMGCLP35914 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
HMGCLP35914 RNU6-320P-201ENST00000516511 106 ntBASIC-0.33□□□□□ -2.46
HMGCLP35914 AP001180.6-201ENST00000584918 159 ntBASIC-0.33□□□□□ -2.46
HMGCLP35914 RNU6-766P-201ENST00000362478 107 ntBASIC-0.34□□□□□ -2.46
HMGCLP35914 RNA5SP275-201ENST00000363936 118 ntBASIC-0.34□□□□□ -2.46
HMGCLP35914 RNA5SP368-201ENST00000364298 116 ntBASIC-0.34□□□□□ -2.46
HMGCLP35914 MIR582-201ENST00000365731 98 ntBASIC-0.34□□□□□ -2.46
HMGCLP35914 RNU6-35P-201ENST00000384530 107 ntBASIC-0.34□□□□□ -2.46
HMGCLP35914 SNORA19-201ENST00000384737 128 ntBASIC-0.34□□□□□ -2.46
HMGCLP35914 RNA5SP292-201ENST00000390974 118 ntBASIC-0.34□□□□□ -2.46
HMGCLP35914 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.34□□□□□ -2.46
HMGCLP35914 MIR548E-201ENST00000408287 88 ntBASIC-0.34□□□□□ -2.46
HMGCLP35914 RNU2-51P-201ENST00000410708 197 ntBASIC-0.34□□□□□ -2.46
HMGCLP35914 AC096531.1-201ENST00000419107 107 ntBASIC-0.34□□□□□ -2.46
HMGCLP35914 SNORD2-201ENST00000459163 69 ntBASIC-0.34□□□□□ -2.46
HMGCLP35914 RNU6-313P-201ENST00000516317 112 ntBASIC-0.34□□□□□ -2.46
HMGCLP35914 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.35□□□□□ -2.47
HMGCLP35914 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.35□□□□□ -2.47
HMGCLP35914 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.35□□□□□ -2.47
HMGCLP35914 MIR9-2-201ENST00000384838 87 ntBASIC-0.35□□□□□ -2.47
HMGCLP35914 RNA5SP395-201ENST00000516567 118 ntBASIC-0.35□□□□□ -2.47
HMGCLP35914 MIR3140-201ENST00000583685 90 ntBASIC-0.35□□□□□ -2.47
HMGCLP35914 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.35□□□□□ -2.47
HMGCLP35914 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.36□□□□□ -2.47
HMGCLP35914 Z95118.1-201ENST00000421372 247 ntBASIC-0.36□□□□□ -2.47
HMGCLP35914 FGF7P7-201ENST00000514120 227 ntBASIC-0.36□□□□□ -2.47
HMGCLP35914 MIR4636-201ENST00000582271 80 ntBASIC-0.36□□□□□ -2.47
HMGCLP35914 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.37□□□□□ -2.47
HMGCLP35914 RNU6-900P-201ENST00000384498 102 ntBASIC-0.37□□□□□ -2.47
HMGCLP35914 RNU7-55P-201ENST00000459426 62 ntBASIC-0.37□□□□□ -2.47
HMGCLP35914 RNU7-61P-201ENST00000515897 61 ntBASIC-0.37□□□□□ -2.47
HMGCLP35914 RNU6-758P-201ENST00000516292 89 ntBASIC-0.37□□□□□ -2.47
HMGCLP35914 SNORA18.5-201ENST00000516616 101 ntBASIC-0.37□□□□□ -2.47
HMGCLP35914 MIR4802-201ENST00000581881 80 ntBASIC-0.37□□□□□ -2.47
HMGCLP35914 MIR4263-201ENST00000584745 83 ntBASIC-0.37□□□□□ -2.47
HMGCLP35914 RNU6-755P-201ENST00000364400 103 ntBASIC-0.38□□□□□ -2.47
HMGCLP35914 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.38□□□□□ -2.47
HMGCLP35914 RNY4P18-201ENST00000391107 89 ntBASIC-0.38□□□□□ -2.47
HMGCLP35914 SNORD90-201ENST00000391145 111 ntBASIC-0.38□□□□□ -2.47
HMGCLP35914 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.38□□□□□ -2.47
HMGCLP35914 RNU6-109P-201ENST00000516364 107 ntBASIC-0.38□□□□□ -2.47
HMGCLP35914 RNU6-406P-201ENST00000516470 107 ntBASIC-0.38□□□□□ -2.47
HMGCLP35914 RNU6-184P-201ENST00000516514 107 ntBASIC-0.38□□□□□ -2.47
HMGCLP35914 RNU6-719P-201ENST00000516671 104 ntBASIC-0.38□□□□□ -2.47
HMGCLP35914 AC026421.1-201ENST00000519101 163 ntBASIC-0.38□□□□□ -2.47
HMGCLP35914 MIR3681-201ENST00000580089 72 ntBASIC-0.38□□□□□ -2.47
HMGCLP35914 SNORD14C-201ENST00000365382 88 ntBASIC-0.39□□□□□ -2.47
HMGCLP35914 SNORD75.1-201ENST00000408373 60 ntBASIC-0.39□□□□□ -2.47
HMGCLP35914 SNORD75.2-201ENST00000408784 58 ntBASIC-0.39□□□□□ -2.47
HMGCLP35914 SNORD115-25-201ENST00000362619 82 ntBASIC-0.4□□□□□ -2.47
HMGCLP35914 RNY4P3-201ENST00000365254 95 ntBASIC-0.4□□□□□ -2.47
HMGCLP35914 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.4□□□□□ -2.47
HMGCLP35914 RNU6-455P-201ENST00000384681 107 ntBASIC-0.4□□□□□ -2.47
HMGCLP35914 MIR604-201ENST00000384880 94 ntBASIC-0.4□□□□□ -2.47
HMGCLP35914 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.4□□□□□ -2.47
HMGCLP35914 MTATP8P2-201ENST00000435212 202 ntBASIC-0.4□□□□□ -2.47
HMGCLP35914 MIR548AZ-201ENST00000616567 95 ntBASIC-0.4□□□□□ -2.47
HMGCLP35914 MIR196A2-201ENST00000385189 110 ntBASIC-0.41□□□□□ -2.48
HMGCLP35914 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.41□□□□□ -2.48
HMGCLP35914 RNA5SP451-201ENST00000410588 110 ntBASIC-0.41□□□□□ -2.48
HMGCLP35914 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.41□□□□□ -2.48
HMGCLP35914 U7.3-201ENST00000616123 62 ntBASIC-0.41□□□□□ -2.48
HMGCLP35914 RNU6-502P-201ENST00000362419 108 ntBASIC-0.42□□□□□ -2.48
HMGCLP35914 MTATP6P29-201ENST00000415057 132 ntBASIC-0.42□□□□□ -2.48
HMGCLP35914 RPS29P8-201ENST00000445109 171 ntBASIC-0.42□□□□□ -2.48
HMGCLP35914 SNORA40.17-201ENST00000517256 115 ntBASIC-0.42□□□□□ -2.48
HMGCLP35914 MIR4493-201ENST00000584016 73 ntBASIC-0.42□□□□□ -2.48
HMGCLP35914 MIR101-1-201ENST00000362265 75 ntBASIC-0.43□□□□□ -2.48
HMGCLP35914 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.43□□□□□ -2.48
HMGCLP35914 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.43□□□□□ -2.48
HMGCLP35914 RNU6-789P-201ENST00000517105 102 ntBASIC-0.43□□□□□ -2.48
HMGCLP35914 RNU6-762P-201ENST00000517107 102 ntBASIC-0.43□□□□□ -2.48
HMGCLP35914 MIR6086-201ENST00000638065 55 ntBASIC-0.43□□□□□ -2.48
HMGCLP35914 MIR4788-201ENST00000639104 80 ntBASIC-0.43□□□□□ -2.48
HMGCLP35914 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.44□□□□□ -2.48
HMGCLP35914 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.44□□□□□ -2.48
HMGCLP35914 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.44□□□□□ -2.48
HMGCLP35914 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.44□□□□□ -2.48
HMGCLP35914 MIR224-201ENST00000384889 81 ntBASIC-0.44□□□□□ -2.48
HMGCLP35914 AC097510.1-201ENST00000510945 133 ntBASIC-0.44□□□□□ -2.48
HMGCLP35914 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.45□□□□□ -2.48
HMGCLP35914 RNU6-30P-201ENST00000384561 107 ntBASIC-0.45□□□□□ -2.48
HMGCLP35914 SNORD56B-201ENST00000384713 71 ntBASIC-0.45□□□□□ -2.48
HMGCLP35914 SNORA32.3-201ENST00000384772 121 ntBASIC-0.45□□□□□ -2.48
HMGCLP35914 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.45□□□□□ -2.48
HMGCLP35914 MIR1236-201ENST00000408340 102 ntBASIC-0.45□□□□□ -2.48
HMGCLP35914 RNA5SP66-201ENST00000517178 101 ntBASIC-0.45□□□□□ -2.48
HMGCLP35914 AP000676.1-201ENST00000533307 52 ntBASIC-0.45□□□□□ -2.48
HMGCLP35914 MIR2052-201ENST00000636055 55 ntBASIC-0.45□□□□□ -2.48
HMGCLP35914 RNU4-32P-201ENST00000363404 141 ntBASIC-0.46□□□□□ -2.48
HMGCLP35914 RNU6-824P-201ENST00000363724 104 ntBASIC-0.46□□□□□ -2.48
HMGCLP35914 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.46□□□□□ -2.48
HMGCLP35914 SNORA63.6-201ENST00000364921 119 ntBASIC-0.46□□□□□ -2.48
HMGCLP35914 AL031737.1-201ENST00000450125 223 ntBASIC-0.46□□□□□ -2.48
HMGCLP35914 snoU13.17-201ENST00000458802 104 ntBASIC-0.46□□□□□ -2.48
HMGCLP35914 snoU13.19-201ENST00000459148 104 ntBASIC-0.46□□□□□ -2.48
HMGCLP35914 SNORD126-201ENST00000459475 77 ntBASIC-0.46□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 179.9 ms