Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 RNU6-382P-201ENST00000365181 106 ntBASIC0.97□□□□□ -2.25
ATP2B4P23634 RNU6-351P-201ENST00000516097 100 ntBASIC0.97□□□□□ -2.25
ATP2B4P23634 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.96□□□□□ -2.26
ATP2B4P23634 SNORD114-2-201ENST00000363953 78 ntBASIC0.95□□□□□ -2.26
ATP2B4P23634 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
ATP2B4P23634 RNU6-154P-201ENST00000384306 106 ntBASIC0.95□□□□□ -2.26
ATP2B4P23634 SNORD110-201ENST00000408189 75 ntBASIC0.95□□□□□ -2.26
ATP2B4P23634 RNU6-752P-201ENST00000516376 102 ntBASIC0.95□□□□□ -2.26
ATP2B4P23634 MIR6779-201ENST00000617283 64 ntBASIC0.95□□□□□ -2.26
ATP2B4P23634 MIR518A1-201ENST00000385068 85 ntBASIC0.94□□□□□ -2.26
ATP2B4P23634 SCARNA18B-201ENST00000458806 135 ntBASIC0.94□□□□□ -2.26
ATP2B4P23634 RPL39P28-201ENST00000465655 155 ntBASIC0.94□□□□□ -2.26
ATP2B4P23634 MIR4653-201ENST00000585107 83 ntBASIC0.94□□□□□ -2.26
ATP2B4P23634 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
ATP2B4P23634 MIR6835-201ENST00000621552 64 ntBASIC0.94□□□□□ -2.26
ATP2B4P23634 RNU6-776P-201ENST00000364403 104 ntBASIC0.93□□□□□ -2.26
ATP2B4P23634 RNU6-1022P-201ENST00000365049 104 ntBASIC0.93□□□□□ -2.26
ATP2B4P23634 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.93□□□□□ -2.26
ATP2B4P23634 AC069271.1-201ENST00000445577 156 ntBASIC0.92□□□□□ -2.26
ATP2B4P23634 RNU5B-6P-201ENST00000516765 68 ntBASIC0.92□□□□□ -2.26
ATP2B4P23634 MIR4752-201ENST00000579672 72 ntBASIC0.92□□□□□ -2.26
ATP2B4P23634 RN7SL793P-201ENST00000583259 296 ntBASIC0.92□□□□□ -2.26
ATP2B4P23634 MIR6866-201ENST00000638146 69 ntBASIC0.92□□□□□ -2.26
ATP2B4P23634 SNORA8.1-201ENST00000384250 140 ntBASIC0.91□□□□□ -2.26
ATP2B4P23634 MIR508-201ENST00000384857 115 ntBASIC0.91□□□□□ -2.26
ATP2B4P23634 Y_RNA.681-201ENST00000516445 113 ntBASIC0.91□□□□□ -2.26
ATP2B4P23634 MIR5706-201ENST00000579841 80 ntBASIC0.91□□□□□ -2.26
ATP2B4P23634 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.9□□□□□ -2.27
ATP2B4P23634 RNU6-1296P-201ENST00000383879 107 ntBASIC0.9□□□□□ -2.27
ATP2B4P23634 AL691482.2-201ENST00000457453 84 ntBASIC0.9□□□□□ -2.27
ATP2B4P23634 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.9□□□□□ -2.27
ATP2B4P23634 MIR6513-201ENST00000621188 64 ntBASIC0.9□□□□□ -2.27
ATP2B4P23634 SNORD114-4-201ENST00000363962 75 ntBASIC0.89□□□□□ -2.27
ATP2B4P23634 MIR216A-201ENST00000385063 110 ntBASIC0.89□□□□□ -2.27
ATP2B4P23634 SNORA70.25-201ENST00000612741 95 ntBASIC0.89□□□□□ -2.27
ATP2B4P23634 Y_RNA.788-201ENST00000622394 112 ntBASIC0.89□□□□□ -2.27
ATP2B4P23634 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
ATP2B4P23634 RNU6-945P-201ENST00000383947 107 ntBASIC0.88□□□□□ -2.27
ATP2B4P23634 MIR889-201ENST00000401280 79 ntBASIC0.88□□□□□ -2.27
ATP2B4P23634 MIR3675-201ENST00000583661 73 ntBASIC0.88□□□□□ -2.27
ATP2B4P23634 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
ATP2B4P23634 AC098934.3-201ENST00000430450 190 ntBASIC0.87□□□□□ -2.27
ATP2B4P23634 SNORD42B-201ENST00000458893 67 ntBASIC0.87□□□□□ -2.27
ATP2B4P23634 RNU6-330P-201ENST00000363015 107 ntBASIC0.86□□□□□ -2.27
ATP2B4P23634 SNORA2A-201ENST00000383885 135 ntBASIC0.86□□□□□ -2.27
ATP2B4P23634 Y_RNA.407-201ENST00000383986 113 ntBASIC0.86□□□□□ -2.27
ATP2B4P23634 RNU4-54P-201ENST00000516428 129 ntBASIC0.86□□□□□ -2.27
ATP2B4P23634 RNU6-70P-201ENST00000516438 60 ntBASIC0.86□□□□□ -2.27
ATP2B4P23634 AC018659.1-201ENST00000551083 169 ntBASIC0.86□□□□□ -2.27
ATP2B4P23634 RNU1-29P-201ENST00000606574 126 ntBASIC0.86□□□□□ -2.27
ATP2B4P23634 U7.6-201ENST00000610841 64 ntBASIC0.86□□□□□ -2.27
ATP2B4P23634 Y_RNA.205-201ENST00000364128 113 ntBASIC0.85□□□□□ -2.27
ATP2B4P23634 RNU6-1039P-201ENST00000383931 107 ntBASIC0.85□□□□□ -2.27
ATP2B4P23634 RNU6-411P-201ENST00000384451 107 ntBASIC0.85□□□□□ -2.27
ATP2B4P23634 MIR3134-201ENST00000579433 74 ntBASIC0.85□□□□□ -2.27
ATP2B4P23634 MIR4473-201ENST00000583731 91 ntBASIC0.85□□□□□ -2.27
ATP2B4P23634 Y_RNA.545-201ENST00000384652 105 ntBASIC0.84□□□□□ -2.27
ATP2B4P23634 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
ATP2B4P23634 MIR936-201ENST00000401264 98 ntBASIC0.84□□□□□ -2.27
ATP2B4P23634 RNU6-848P-201ENST00000515948 107 ntBASIC0.84□□□□□ -2.27
ATP2B4P23634 RNU6-863P-201ENST00000515989 104 ntBASIC0.84□□□□□ -2.27
ATP2B4P23634 RNU6-617P-201ENST00000516147 107 ntBASIC0.84□□□□□ -2.27
ATP2B4P23634 RNU6-473P-201ENST00000516164 107 ntBASIC0.84□□□□□ -2.27
ATP2B4P23634 RNU6-1049P-201ENST00000516414 107 ntBASIC0.84□□□□□ -2.27
ATP2B4P23634 MIR6509-201ENST00000614603 85 ntBASIC0.84□□□□□ -2.27
ATP2B4P23634 Y_RNA.423-201ENST00000384057 113 ntBASIC0.83□□□□□ -2.28
ATP2B4P23634 RNU6-229P-201ENST00000516614 102 ntBASIC0.83□□□□□ -2.28
ATP2B4P23634 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.83□□□□□ -2.28
ATP2B4P23634 RNA5SP325-201ENST00000363756 130 ntBASIC0.8□□□□□ -2.28
ATP2B4P23634 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
ATP2B4P23634 RNA5SP121-201ENST00000516537 101 ntBASIC0.8□□□□□ -2.28
ATP2B4P23634 HMGN2P22-201ENST00000427588 175 ntBASIC0.79□□□□□ -2.28
ATP2B4P23634 uc_338.10-201ENST00000621872 182 ntBASIC0.79□□□□□ -2.28
ATP2B4P23634 MIR664A-201ENST00000626086 82 ntBASIC0.79□□□□□ -2.28
ATP2B4P23634 MIR6755-201ENST00000619993 66 ntBASIC0.78□□□□□ -2.28
ATP2B4P23634 RNA5SP347-201ENST00000362445 119 ntBASIC0.77□□□□□ -2.29
ATP2B4P23634 Y_RNA.125-201ENST00000363371 111 ntBASIC0.77□□□□□ -2.29
ATP2B4P23634 RNU6-587P-201ENST00000391282 106 ntBASIC0.77□□□□□ -2.29
ATP2B4P23634 RNA5SP193-201ENST00000410353 107 ntBASIC0.77□□□□□ -2.29
ATP2B4P23634 SCARNA17.3-201ENST00000516381 125 ntBASIC0.77□□□□□ -2.29
ATP2B4P23634 MIR548AE1-201ENST00000583292 70 ntBASIC0.77□□□□□ -2.29
ATP2B4P23634 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
ATP2B4P23634 RNU6-260P-201ENST00000384092 107 ntBASIC0.76□□□□□ -2.29
ATP2B4P23634 Y_RNA.565-201ENST00000384719 101 ntBASIC0.76□□□□□ -2.29
ATP2B4P23634 MIR203A-201ENST00000384836 110 ntBASIC0.76□□□□□ -2.29
ATP2B4P23634 MIR4711-201ENST00000578274 70 ntBASIC0.76□□□□□ -2.29
ATP2B4P23634 SNORD44.1-201ENST00000363202 61 ntBASIC0.75□□□□□ -2.29
ATP2B4P23634 MIR154-201ENST00000385243 84 ntBASIC0.75□□□□□ -2.29
ATP2B4P23634 MIR652-201ENST00000385278 98 ntBASIC0.75□□□□□ -2.29
ATP2B4P23634 MIR760-201ENST00000390220 80 ntBASIC0.75□□□□□ -2.29
ATP2B4P23634 MIR3657-201ENST00000584818 117 ntBASIC0.75□□□□□ -2.29
ATP2B4P23634 SNORD45.1-201ENST00000363181 77 ntBASIC0.74□□□□□ -2.29
ATP2B4P23634 RNU6-1241P-201ENST00000384536 107 ntBASIC0.74□□□□□ -2.29
ATP2B4P23634 MIR8053-201ENST00000613344 75 ntBASIC0.74□□□□□ -2.29
ATP2B4P23634 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
ATP2B4P23634 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.73□□□□□ -2.29
ATP2B4P23634 SNORD114-23-201ENST00000363536 72 ntBASIC0.73□□□□□ -2.29
ATP2B4P23634 MIR193B-201ENST00000384907 83 ntBASIC0.73□□□□□ -2.29
ATP2B4P23634 RNU6-687P-201ENST00000516443 89 ntBASIC0.73□□□□□ -2.29
ATP2B4P23634 RNU6-1015P-201ENST00000517121 99 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 189.4 ms