Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC011195.1-201ENST00000578177 177 ntBASIC1.29□□□□□ -2.2
NFKB1P19838 MIR4452-201ENST00000583004 71 ntBASIC1.29□□□□□ -2.2
NFKB1P19838 MIR3660-201ENST00000584845 100 ntBASIC1.29□□□□□ -2.2
NFKB1P19838 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
NFKB1P19838 RNU4-45P-201ENST00000365469 141 ntBASIC1.28□□□□□ -2.2
NFKB1P19838 RNU6-669P-201ENST00000365575 107 ntBASIC1.28□□□□□ -2.2
NFKB1P19838 RNA5SP227-201ENST00000516184 113 ntBASIC1.28□□□□□ -2.2
NFKB1P19838 RNU5B-6P-201ENST00000516765 68 ntBASIC1.28□□□□□ -2.2
NFKB1P19838 SNORA36.1-201ENST00000363424 132 ntBASIC1.27□□□□□ -2.21
NFKB1P19838 Y_RNA.375-201ENST00000365625 101 ntBASIC1.27□□□□□ -2.21
NFKB1P19838 AC110620.1-201ENST00000416042 228 ntBASIC1.27□□□□□ -2.21
NFKB1P19838 RNA5SP220-201ENST00000516298 104 ntBASIC1.27□□□□□ -2.21
NFKB1P19838 MIR6504-201ENST00000613520 61 ntBASIC1.27□□□□□ -2.21
NFKB1P19838 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
NFKB1P19838 RNA5SP147-201ENST00000516493 109 ntBASIC1.26□□□□□ -2.21
NFKB1P19838 AC018659.1-201ENST00000551083 169 ntBASIC1.26□□□□□ -2.21
NFKB1P19838 MIR6739-201ENST00000622461 75 ntBASIC1.26□□□□□ -2.21
NFKB1P19838 Y_RNA.250-201ENST00000364542 110 ntBASIC1.25□□□□□ -2.21
NFKB1P19838 RNA5SP102-201ENST00000516865 106 ntBASIC1.25□□□□□ -2.21
NFKB1P19838 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.25□□□□□ -2.21
NFKB1P19838 SNORD114-22-201ENST00000365423 72 ntBASIC1.24□□□□□ -2.21
NFKB1P19838 RNU6-542P-201ENST00000516405 103 ntBASIC1.24□□□□□ -2.21
NFKB1P19838 RNU6-656P-201ENST00000516785 107 ntBASIC1.24□□□□□ -2.21
NFKB1P19838 RNA5SP268-201ENST00000516828 124 ntBASIC1.24□□□□□ -2.21
NFKB1P19838 MIR6779-201ENST00000617283 64 ntBASIC1.24□□□□□ -2.21
NFKB1P19838 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
NFKB1P19838 RNU6-939P-201ENST00000384634 107 ntBASIC1.23□□□□□ -2.21
NFKB1P19838 RNA5SP94-201ENST00000516917 108 ntBASIC1.23□□□□□ -2.21
NFKB1P19838 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.23□□□□□ -2.21
NFKB1P19838 AL353770.2-201ENST00000620024 78 ntBASIC1.23□□□□□ -2.21
NFKB1P19838 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.23□□□□□ -2.21
NFKB1P19838 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
NFKB1P19838 SNORD114-27-201ENST00000363766 70 ntBASIC1.21□□□□□ -2.22
NFKB1P19838 MIR7107-201ENST00000611489 80 ntBASIC1.21□□□□□ -2.22
NFKB1P19838 MIR6515-201ENST00000619843 57 ntBASIC1.21□□□□□ -2.22
NFKB1P19838 RNU6-499P-201ENST00000365615 107 ntBASIC1.2□□□□□ -2.22
NFKB1P19838 RNU6-392P-201ENST00000364926 101 ntBASIC1.19□□□□□ -2.22
NFKB1P19838 Y_RNA.407-201ENST00000383986 113 ntBASIC1.19□□□□□ -2.22
NFKB1P19838 AC006210.1-201ENST00000424882 111 ntBASIC1.19□□□□□ -2.22
NFKB1P19838 RNA5SP215-201ENST00000363440 122 ntBASIC1.18□□□□□ -2.22
NFKB1P19838 AL353765.1-201ENST00000605514 183 ntBASIC1.18□□□□□ -2.22
NFKB1P19838 AC092634.7-201ENST00000621022 103 ntBASIC1.18□□□□□ -2.22
NFKB1P19838 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
NFKB1P19838 RNU6-1162P-201ENST00000384443 104 ntBASIC1.17□□□□□ -2.22
NFKB1P19838 MIR521-2-201ENST00000384818 87 ntBASIC1.17□□□□□ -2.22
NFKB1P19838 SNORD110-201ENST00000408189 75 ntBASIC1.17□□□□□ -2.22
NFKB1P19838 RNA5SP222-201ENST00000411039 105 ntBASIC1.17□□□□□ -2.22
NFKB1P19838 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.17□□□□□ -2.22
NFKB1P19838 SCARNA17.3-201ENST00000516381 125 ntBASIC1.17□□□□□ -2.22
NFKB1P19838 RNU6-1089P-201ENST00000516473 104 ntBASIC1.17□□□□□ -2.22
NFKB1P19838 MIR96-201ENST00000362288 78 ntBASIC1.16□□□□□ -2.22
NFKB1P19838 RNA5SP299-201ENST00000391203 116 ntBASIC1.16□□□□□ -2.22
NFKB1P19838 AC021146.9-201ENST00000512503 156 ntBASIC1.16□□□□□ -2.22
NFKB1P19838 SCARNA21.1-201ENST00000515996 128 ntBASIC1.16□□□□□ -2.22
NFKB1P19838 MIR548AE1-201ENST00000583292 70 ntBASIC1.16□□□□□ -2.22
NFKB1P19838 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.15□□□□□ -2.22
NFKB1P19838 Y_RNA.540-201ENST00000384638 111 ntBASIC1.15□□□□□ -2.23
NFKB1P19838 MIR652-201ENST00000385278 98 ntBASIC1.15□□□□□ -2.23
NFKB1P19838 snoU13.13-201ENST00000458842 104 ntBASIC1.15□□□□□ -2.23
NFKB1P19838 RPS29P1-201ENST00000465274 159 ntBASIC1.15□□□□□ -2.23
NFKB1P19838 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.15□□□□□ -2.23
NFKB1P19838 MIR4473-201ENST00000583731 91 ntBASIC1.15□□□□□ -2.23
NFKB1P19838 MTND4LP19-201ENST00000403051 166 ntBASIC1.14□□□□□ -2.23
NFKB1P19838 MIR1285-1-201ENST00000408593 84 ntBASIC1.14□□□□□ -2.23
NFKB1P19838 AL157398.1-201ENST00000452981 186 ntBASIC1.14□□□□□ -2.23
NFKB1P19838 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.14□□□□□ -2.23
NFKB1P19838 SNORA25.5-201ENST00000363782 126 ntBASIC1.13□□□□□ -2.23
NFKB1P19838 Y_RNA.633-201ENST00000459107 95 ntBASIC1.13□□□□□ -2.23
NFKB1P19838 MIR6078-201ENST00000611069 100 ntBASIC1.13□□□□□ -2.23
NFKB1P19838 SNORA63.6-201ENST00000364921 119 ntBASIC1.12□□□□□ -2.23
NFKB1P19838 SNORA70.25-201ENST00000612741 95 ntBASIC1.12□□□□□ -2.23
NFKB1P19838 PVT1_3.1-201ENST00000620853 95 ntBASIC1.12□□□□□ -2.23
NFKB1P19838 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.12□□□□□ -2.23
NFKB1P19838 RNU6-302P-201ENST00000365249 107 ntBASIC1.11□□□□□ -2.23
NFKB1P19838 Y_RNA.374-201ENST00000365606 101 ntBASIC1.11□□□□□ -2.23
NFKB1P19838 SNORA15B-2-201ENST00000384058 135 ntBASIC1.11□□□□□ -2.23
NFKB1P19838 SNORA15B-1-201ENST00000384334 135 ntBASIC1.11□□□□□ -2.23
NFKB1P19838 MIR520E-201ENST00000384867 87 ntBASIC1.11□□□□□ -2.23
NFKB1P19838 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
NFKB1P19838 MIR4661-201ENST00000582720 75 ntBASIC1.11□□□□□ -2.23
NFKB1P19838 AC022709.1-201ENST00000615967 87 ntBASIC1.11□□□□□ -2.23
NFKB1P19838 SNORD114-26-201ENST00000363543 72 ntBASIC1.1□□□□□ -2.23
NFKB1P19838 MIR582-201ENST00000365731 98 ntBASIC1.1□□□□□ -2.23
NFKB1P19838 RNY1P8-201ENST00000383970 114 ntBASIC1.1□□□□□ -2.23
NFKB1P19838 MIR548E-201ENST00000408287 88 ntBASIC1.1□□□□□ -2.23
NFKB1P19838 MIR4752-201ENST00000579672 72 ntBASIC1.1□□□□□ -2.23
NFKB1P19838 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
NFKB1P19838 RNA5SP192-201ENST00000364404 120 ntBASIC1.09□□□□□ -2.23
NFKB1P19838 MIR633-201ENST00000384821 98 ntBASIC1.09□□□□□ -2.23
NFKB1P19838 OR2A41P-201ENST00000473586 105 ntBASIC1.09□□□□□ -2.23
NFKB1P19838 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.09□□□□□ -2.23
NFKB1P19838 RNA5SP436-201ENST00000516020 115 ntBASIC1.09□□□□□ -2.23
NFKB1P19838 RNU1-29P-201ENST00000606574 126 ntBASIC1.09□□□□□ -2.23
NFKB1P19838 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
NFKB1P19838 RNA5SP517-201ENST00000364724 117 ntBASIC1.08□□□□□ -2.24
NFKB1P19838 SNORA36.2-201ENST00000384004 127 ntBASIC1.08□□□□□ -2.24
NFKB1P19838 MIR140-201ENST00000385282 100 ntBASIC1.08□□□□□ -2.24
NFKB1P19838 AC079150.2-201ENST00000443733 78 ntBASIC1.08□□□□□ -2.24
NFKB1P19838 SNORD114-21-201ENST00000606412 72 ntBASIC1.08□□□□□ -2.24
NFKB1P19838 uc_338.10-201ENST00000621872 182 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 191.9 ms