Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 SNORD89-201ENST00000390981 114 ntBASIC2.23□□□□□ -2.05
CD44P16070 AL354695.1-201ENST00000427935 228 ntBASIC2.23□□□□□ -2.05
CD44P16070 MIR3612-201ENST00000579753 87 ntBASIC2.23□□□□□ -2.05
CD44P16070 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CD44P16070 SNORD12-201ENST00000391002 90 ntBASIC2.22□□□□□ -2.05
CD44P16070 SNORA70.25-201ENST00000612741 95 ntBASIC2.22□□□□□ -2.05
CD44P16070 MTRNR2L9-201ENST00000622562 75 ntBASIC2.22□□□□□ -2.05
CD44P16070 MIR449A-201ENST00000362113 91 ntBASIC2.21□□□□□ -2.06
CD44P16070 RNU6-485P-201ENST00000363475 107 ntBASIC2.21□□□□□ -2.06
CD44P16070 RNU6-301P-201ENST00000384277 107 ntBASIC2.21□□□□□ -2.06
CD44P16070 RNU6-530P-201ENST00000391180 107 ntBASIC2.21□□□□□ -2.06
CD44P16070 HMGN2P22-201ENST00000427588 175 ntBASIC2.21□□□□□ -2.06
CD44P16070 SNORA70.22-201ENST00000517160 124 ntBASIC2.21□□□□□ -2.06
CD44P16070 MIR6873-201ENST00000622788 63 ntBASIC2.21□□□□□ -2.06
CD44P16070 MIR144-201ENST00000384886 86 ntBASIC2.2□□□□□ -2.06
CD44P16070 MIR573-201ENST00000384964 99 ntBASIC2.2□□□□□ -2.06
CD44P16070 RNU1-78P-201ENST00000391248 165 ntBASIC2.2□□□□□ -2.06
CD44P16070 SNORD57-201ENST00000448188 72 ntBASIC2.2□□□□□ -2.06
CD44P16070 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
CD44P16070 RNU4-52P-201ENST00000384209 138 ntBASIC2.19□□□□□ -2.06
CD44P16070 SNORA3.2-201ENST00000408221 125 ntBASIC2.19□□□□□ -2.06
CD44P16070 RNU6-1223P-201ENST00000517124 104 ntBASIC2.19□□□□□ -2.06
CD44P16070 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.19□□□□□ -2.06
CD44P16070 RN7SKP223-201ENST00000410582 62 ntBASIC2.18□□□□□ -2.06
CD44P16070 AC008413.1-201ENST00000511864 177 ntBASIC2.18□□□□□ -2.06
CD44P16070 RNU6-782P-201ENST00000516852 104 ntBASIC2.18□□□□□ -2.06
CD44P16070 AL353803.5-201ENST00000599815 141 ntBASIC2.18□□□□□ -2.06
CD44P16070 MIR6852-201ENST00000621699 66 ntBASIC2.18□□□□□ -2.06
CD44P16070 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.18□□□□□ -2.06
CD44P16070 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.17□□□□□ -2.06
CD44P16070 SNORA36.1-201ENST00000363424 132 ntBASIC2.17□□□□□ -2.06
CD44P16070 SNORA67.1-201ENST00000364749 141 ntBASIC2.17□□□□□ -2.06
CD44P16070 AL356320.1-201ENST00000429616 163 ntBASIC2.17□□□□□ -2.06
CD44P16070 AC002429.1-201ENST00000437672 148 ntBASIC2.17□□□□□ -2.06
CD44P16070 MIR1273D-201ENST00000577266 86 ntBASIC2.17□□□□□ -2.06
CD44P16070 MIR6895-201ENST00000613497 78 ntBASIC2.17□□□□□ -2.06
CD44P16070 MIR4317-201ENST00000637586 65 ntBASIC2.17□□□□□ -2.06
CD44P16070 SNORD63.2-201ENST00000516303 64 ntBASIC2.16□□□□□ -2.06
CD44P16070 RNA5SP268-201ENST00000516828 124 ntBASIC2.16□□□□□ -2.06
CD44P16070 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CD44P16070 RNU6-502P-201ENST00000362419 108 ntBASIC2.15□□□□□ -2.07
CD44P16070 MIR5694-201ENST00000581190 76 ntBASIC2.15□□□□□ -2.07
CD44P16070 MIR4422-201ENST00000581938 83 ntBASIC2.15□□□□□ -2.07
CD44P16070 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.15□□□□□ -2.07
CD44P16070 MIR219B-201ENST00000637023 88 ntBASIC2.15□□□□□ -2.07
CD44P16070 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
CD44P16070 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CD44P16070 MIR3198-2-201ENST00000577868 80 ntBASIC2.14□□□□□ -2.07
CD44P16070 MIR4448-201ENST00000584360 86 ntBASIC2.14□□□□□ -2.07
CD44P16070 AC108676.2-201ENST00000605225 163 ntBASIC2.14□□□□□ -2.07
CD44P16070 MIR6507-201ENST00000613630 70 ntBASIC2.14□□□□□ -2.07
CD44P16070 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CD44P16070 SNORD114-29-201ENST00000364819 70 ntBASIC2.13□□□□□ -2.07
CD44P16070 RNA5SP489-201ENST00000410986 109 ntBASIC2.13□□□□□ -2.07
CD44P16070 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC2.13□□□□□ -2.07
CD44P16070 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.13□□□□□ -2.07
CD44P16070 MIR7107-201ENST00000611489 80 ntBASIC2.13□□□□□ -2.07
CD44P16070 RNU6-1047P-201ENST00000364418 107 ntBASIC2.12□□□□□ -2.07
CD44P16070 MIR4432-201ENST00000581823 84 ntBASIC2.12□□□□□ -2.07
CD44P16070 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.11□□□□□ -2.07
CD44P16070 Y_RNA.321-201ENST00000365149 102 ntBASIC2.11□□□□□ -2.07
CD44P16070 RNA5SP364-201ENST00000516938 78 ntBASIC2.11□□□□□ -2.07
CD44P16070 U7.5-201ENST00000517224 61 ntBASIC2.11□□□□□ -2.07
CD44P16070 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.11□□□□□ -2.07
CD44P16070 RNA5SP425-201ENST00000410336 112 ntBASIC2.1□□□□□ -2.07
CD44P16070 Y_RNA.698-201ENST00000516798 118 ntBASIC2.1□□□□□ -2.07
CD44P16070 MIR4752-201ENST00000579672 72 ntBASIC2.1□□□□□ -2.07
CD44P16070 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CD44P16070 FABP5P4-201ENST00000437203 171 ntBASIC2.09□□□□□ -2.07
CD44P16070 UBE2DNL-203ENST00000474922 222 ntBASIC2.09□□□□□ -2.07
CD44P16070 SNORD63.1-201ENST00000516178 80 ntBASIC2.09□□□□□ -2.07
CD44P16070 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC2.08□□□□□ -2.08
CD44P16070 MIR222-201ENST00000384992 110 ntBASIC2.08□□□□□ -2.08
CD44P16070 HMGN2P19-201ENST00000425149 265 ntBASIC2.08□□□□□ -2.08
CD44P16070 AC003989.2-201ENST00000440224 169 ntBASIC2.08□□□□□ -2.08
CD44P16070 RNU7-88P-201ENST00000458752 63 ntBASIC2.08□□□□□ -2.08
CD44P16070 RNU6-1174P-201ENST00000517278 101 ntBASIC2.08□□□□□ -2.08
CD44P16070 MIR3170-201ENST00000582699 77 ntBASIC2.08□□□□□ -2.08
CD44P16070 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CD44P16070 RNU6-175P-201ENST00000516896 107 ntBASIC2.06□□□□□ -2.08
CD44P16070 RNU7-188P-201ENST00000517063 64 ntBASIC2.06□□□□□ -2.08
CD44P16070 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.06□□□□□ -2.08
CD44P16070 uc_338.20-201ENST00000621563 178 ntBASIC2.06□□□□□ -2.08
CD44P16070 SNORD115-23-201ENST00000364461 82 ntBASIC2.05□□□□□ -2.08
CD44P16070 SNORA16.1-201ENST00000364597 132 ntBASIC2.05□□□□□ -2.08
CD44P16070 MIR17-201ENST00000385012 84 ntBASIC2.05□□□□□ -2.08
CD44P16070 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.05□□□□□ -2.08
CD44P16070 MIR5706-201ENST00000579841 80 ntBASIC2.05□□□□□ -2.08
CD44P16070 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CD44P16070 SNORD48-201ENST00000364953 64 ntBASIC2.04□□□□□ -2.08
CD44P16070 MIR634-201ENST00000385208 97 ntBASIC2.04□□□□□ -2.08
CD44P16070 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CD44P16070 RNU1-29P-201ENST00000606574 126 ntBASIC2.04□□□□□ -2.08
CD44P16070 MIR6840-201ENST00000611937 71 ntBASIC2.04□□□□□ -2.08
CD44P16070 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CD44P16070 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.03□□□□□ -2.08
CD44P16070 MIR18A-201ENST00000362310 71 ntBASIC2.02□□□□□ -2.09
CD44P16070 RNA5SP508-201ENST00000411327 119 ntBASIC2.02□□□□□ -2.09
CD44P16070 MIR4419B-201ENST00000577260 68 ntBASIC2.02□□□□□ -2.09
CD44P16070 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 248.7 ms