Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 MIR6767-201ENST00000637302 66 ntBASIC1.41□□□□□ -2.18
HOXD8P13378 Y_RNA.178-201ENST00000363832 102 ntBASIC1.4□□□□□ -2.19
HOXD8P13378 NAMPTP3-201ENST00000569273 224 ntBASIC1.4□□□□□ -2.19
HOXD8P13378 Y_RNA.30-201ENST00000362572 97 ntBASIC1.39□□□□□ -2.19
HOXD8P13378 Y_RNA.250-201ENST00000364542 110 ntBASIC1.39□□□□□ -2.19
HOXD8P13378 RNU6-54P-201ENST00000365563 107 ntBASIC1.39□□□□□ -2.19
HOXD8P13378 MIR573-201ENST00000384964 99 ntBASIC1.39□□□□□ -2.19
HOXD8P13378 MIR3612-201ENST00000579753 87 ntBASIC1.39□□□□□ -2.19
HOXD8P13378 AC025627.3-201ENST00000582078 182 ntBASIC1.39□□□□□ -2.19
HOXD8P13378 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
HOXD8P13378 MIR26B-201ENST00000362251 77 ntBASIC1.38□□□□□ -2.19
HOXD8P13378 SNORD114-27-201ENST00000363766 70 ntBASIC1.38□□□□□ -2.19
HOXD8P13378 RNU6-302P-201ENST00000365249 107 ntBASIC1.38□□□□□ -2.19
HOXD8P13378 RNU6V-201ENST00000384105 107 ntBASIC1.38□□□□□ -2.19
HOXD8P13378 MIR4460-201ENST00000577862 86 ntBASIC1.38□□□□□ -2.19
HOXD8P13378 MIR3678-201ENST00000578455 94 ntBASIC1.38□□□□□ -2.19
HOXD8P13378 MIR7974-201ENST00000615835 79 ntBASIC1.38□□□□□ -2.19
HOXD8P13378 SNORA25.5-201ENST00000363782 126 ntBASIC1.37□□□□□ -2.19
HOXD8P13378 SNORD114-4-201ENST00000363962 75 ntBASIC1.37□□□□□ -2.19
HOXD8P13378 MIR19B1-201ENST00000384829 87 ntBASIC1.37□□□□□ -2.19
HOXD8P13378 MIR203A-201ENST00000384836 110 ntBASIC1.37□□□□□ -2.19
HOXD8P13378 SNORA2.1-201ENST00000363089 137 ntBASIC1.36□□□□□ -2.19
HOXD8P13378 SNORD18A-201ENST00000363753 72 ntBASIC1.36□□□□□ -2.19
HOXD8P13378 RNU6-260P-201ENST00000384092 107 ntBASIC1.36□□□□□ -2.19
HOXD8P13378 MIR633-201ENST00000384821 98 ntBASIC1.36□□□□□ -2.19
HOXD8P13378 RNU6-955P-201ENST00000410497 104 ntBASIC1.36□□□□□ -2.19
HOXD8P13378 RNU6-982P-201ENST00000516216 102 ntBASIC1.36□□□□□ -2.19
HOXD8P13378 AC092634.7-201ENST00000621022 103 ntBASIC1.36□□□□□ -2.19
HOXD8P13378 SNORD114-24-201ENST00000365029 72 ntBASIC1.35□□□□□ -2.19
HOXD8P13378 SNORD26-201ENST00000384147 75 ntBASIC1.35□□□□□ -2.19
HOXD8P13378 SCARNA21.1-201ENST00000515996 128 ntBASIC1.35□□□□□ -2.19
HOXD8P13378 MIR3657-201ENST00000584818 117 ntBASIC1.35□□□□□ -2.19
HOXD8P13378 MIR150-201ENST00000385048 84 ntBASIC1.34□□□□□ -2.19
HOXD8P13378 AC011195.1-201ENST00000578177 177 ntBASIC1.34□□□□□ -2.19
HOXD8P13378 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
HOXD8P13378 RNU6-645P-201ENST00000364649 106 ntBASIC1.33□□□□□ -2.2
HOXD8P13378 SNORD41.1-201ENST00000391000 69 ntBASIC1.33□□□□□ -2.2
HOXD8P13378 RNA5SP47-201ENST00000517230 109 ntBASIC1.33□□□□□ -2.2
HOXD8P13378 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
HOXD8P13378 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
HOXD8P13378 RNU6-829P-201ENST00000363700 112 ntBASIC1.32□□□□□ -2.2
HOXD8P13378 SCARNA16.5-201ENST00000517114 183 ntBASIC1.32□□□□□ -2.2
HOXD8P13378 MIR466-201ENST00000580653 84 ntBASIC1.32□□□□□ -2.2
HOXD8P13378 MIR6739-201ENST00000622461 75 ntBASIC1.32□□□□□ -2.2
HOXD8P13378 Y_RNA.236-201ENST00000364427 111 ntBASIC1.31□□□□□ -2.2
HOXD8P13378 RNU6-726P-201ENST00000364680 107 ntBASIC1.31□□□□□ -2.2
HOXD8P13378 RNU6-939P-201ENST00000384634 107 ntBASIC1.31□□□□□ -2.2
HOXD8P13378 RNU6-808P-201ENST00000391233 108 ntBASIC1.31□□□□□ -2.2
HOXD8P13378 SNORD99-201ENST00000408612 74 ntBASIC1.31□□□□□ -2.2
HOXD8P13378 RNA5SP227-201ENST00000516184 113 ntBASIC1.31□□□□□ -2.2
HOXD8P13378 RN7SL793P-201ENST00000583259 296 ntBASIC1.31□□□□□ -2.2
HOXD8P13378 AL109933.3-201ENST00000619095 188 ntBASIC1.31□□□□□ -2.2
HOXD8P13378 MT-TY-201ENST00000387409 66 ntBASIC1.3□□□□□ -2.2
HOXD8P13378 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.3□□□□□ -2.2
HOXD8P13378 RNU6-1162P-201ENST00000384443 104 ntBASIC1.29□□□□□ -2.2
HOXD8P13378 MIR618-201ENST00000385287 98 ntBASIC1.29□□□□□ -2.2
HOXD8P13378 RNU6-122P-201ENST00000516818 107 ntBASIC1.29□□□□□ -2.2
HOXD8P13378 RNA5SP404-201ENST00000517118 132 ntBASIC1.29□□□□□ -2.2
HOXD8P13378 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
HOXD8P13378 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
HOXD8P13378 RNA5SP299-201ENST00000391203 116 ntBASIC1.28□□□□□ -2.2
HOXD8P13378 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.28□□□□□ -2.2
HOXD8P13378 RNA5SP255-201ENST00000516370 107 ntBASIC1.28□□□□□ -2.2
HOXD8P13378 RNU6-1089P-201ENST00000516473 104 ntBASIC1.28□□□□□ -2.2
HOXD8P13378 AC018659.1-201ENST00000551083 169 ntBASIC1.28□□□□□ -2.2
HOXD8P13378 RNU6-92P-201ENST00000605893 104 ntBASIC1.28□□□□□ -2.2
HOXD8P13378 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.28□□□□□ -2.2
HOXD8P13378 RNA5SP192-201ENST00000364404 120 ntBASIC1.27□□□□□ -2.21
HOXD8P13378 RNU1-141P-201ENST00000364623 158 ntBASIC1.27□□□□□ -2.21
HOXD8P13378 RNU6-269P-201ENST00000391077 97 ntBASIC1.27□□□□□ -2.21
HOXD8P13378 MIR5000-201ENST00000577717 103 ntBASIC1.27□□□□□ -2.21
HOXD8P13378 MIR3938-201ENST00000582157 103 ntBASIC1.27□□□□□ -2.21
HOXD8P13378 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
HOXD8P13378 RNU6-1079P-201ENST00000362861 110 ntBASIC1.26□□□□□ -2.21
HOXD8P13378 RNA5SP222-201ENST00000411039 105 ntBASIC1.26□□□□□ -2.21
HOXD8P13378 RNA5SP147-201ENST00000516493 109 ntBASIC1.26□□□□□ -2.21
HOXD8P13378 RNU5B-6P-201ENST00000516765 68 ntBASIC1.26□□□□□ -2.21
HOXD8P13378 Y_RNA.722-201ENST00000517279 114 ntBASIC1.26□□□□□ -2.21
HOXD8P13378 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
HOXD8P13378 MIR18A-201ENST00000362310 71 ntBASIC1.25□□□□□ -2.21
HOXD8P13378 SNORA8.2-201ENST00000384372 139 ntBASIC1.25□□□□□ -2.21
HOXD8P13378 MIR521-2-201ENST00000384818 87 ntBASIC1.25□□□□□ -2.21
HOXD8P13378 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
HOXD8P13378 RNA5SP484-201ENST00000458857 111 ntBASIC1.25□□□□□ -2.21
HOXD8P13378 SNORD42B-201ENST00000458893 67 ntBASIC1.25□□□□□ -2.21
HOXD8P13378 RNU6-656P-201ENST00000516785 107 ntBASIC1.25□□□□□ -2.21
HOXD8P13378 RNU1-124P-201ENST00000363861 145 ntBASIC1.24□□□□□ -2.21
HOXD8P13378 RNU4-45P-201ENST00000365469 141 ntBASIC1.24□□□□□ -2.21
HOXD8P13378 SNORA15B-2-201ENST00000384058 135 ntBASIC1.24□□□□□ -2.21
HOXD8P13378 SNORA15B-1-201ENST00000384334 135 ntBASIC1.24□□□□□ -2.21
HOXD8P13378 MIR4295-201ENST00000585286 85 ntBASIC1.24□□□□□ -2.21
HOXD8P13378 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
HOXD8P13378 SNORD113-2-201ENST00000391082 72 ntBASIC1.23□□□□□ -2.21
HOXD8P13378 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.23□□□□□ -2.21
HOXD8P13378 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.23□□□□□ -2.21
HOXD8P13378 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.23□□□□□ -2.21
HOXD8P13378 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
HOXD8P13378 AC087343.1-201ENST00000477341 475 ntBASIC1.22□□□□□ -2.21
HOXD8P13378 RNA5SP268-201ENST00000516828 124 ntBASIC1.22□□□□□ -2.21
HOXD8P13378 uc_338.10-201ENST00000621872 182 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms