Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 MIR758-201ENST00000390227 88 ntBASIC1.46□□□□□ -2.18
THBS1P07996 AC021146.9-201ENST00000512503 156 ntBASIC1.46□□□□□ -2.18
THBS1P07996 MIR8081-201ENST00000611533 95 ntBASIC1.46□□□□□ -2.18
THBS1P07996 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
THBS1P07996 RNU6-698P-201ENST00000363523 107 ntBASIC1.45□□□□□ -2.18
THBS1P07996 RNU6-34P-201ENST00000364874 107 ntBASIC1.45□□□□□ -2.18
THBS1P07996 RNU4-45P-201ENST00000365469 141 ntBASIC1.45□□□□□ -2.18
THBS1P07996 MIR517B-201ENST00000385102 67 ntBASIC1.45□□□□□ -2.18
THBS1P07996 RNU5B-6P-201ENST00000516765 68 ntBASIC1.45□□□□□ -2.18
THBS1P07996 MIR3612-201ENST00000579753 87 ntBASIC1.45□□□□□ -2.18
THBS1P07996 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.45□□□□□ -2.18
THBS1P07996 SNORD60.1-201ENST00000362451 73 ntBASIC1.44□□□□□ -2.18
THBS1P07996 Y_RNA.407-201ENST00000383986 113 ntBASIC1.44□□□□□ -2.18
THBS1P07996 RNA5SP484-201ENST00000458857 111 ntBASIC1.44□□□□□ -2.18
THBS1P07996 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.44□□□□□ -2.18
THBS1P07996 BX248123.2-201ENST00000606318 124 ntBASIC1.44□□□□□ -2.18
THBS1P07996 AL162376.1-201ENST00000624117 175 ntBASIC1.44□□□□□ -2.18
THBS1P07996 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.44□□□□□ -2.18
THBS1P07996 MIR6828-201ENST00000636181 60 ntBASIC1.44□□□□□ -2.18
THBS1P07996 SNORA63.6-201ENST00000364921 119 ntBASIC1.43□□□□□ -2.18
THBS1P07996 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
THBS1P07996 Y_RNA.224-201ENST00000364308 111 ntBASIC1.42□□□□□ -2.18
THBS1P07996 RNU7-95P-201ENST00000459222 64 ntBASIC1.42□□□□□ -2.18
THBS1P07996 TRMT112P2-201ENST00000512910 132 ntBASIC1.42□□□□□ -2.18
THBS1P07996 SCARNA17.3-201ENST00000516381 125 ntBASIC1.42□□□□□ -2.18
THBS1P07996 RNA5SP327-201ENST00000362494 101 ntBASIC1.41□□□□□ -2.18
THBS1P07996 RNU6-446P-201ENST00000362827 106 ntBASIC1.41□□□□□ -2.18
THBS1P07996 MIR517C-201ENST00000385103 95 ntBASIC1.41□□□□□ -2.18
THBS1P07996 RNA5SP227-201ENST00000516184 113 ntBASIC1.41□□□□□ -2.18
THBS1P07996 RNU6-520P-201ENST00000384717 104 ntBASIC1.4□□□□□ -2.19
THBS1P07996 MIR630-201ENST00000384957 97 ntBASIC1.4□□□□□ -2.19
THBS1P07996 MIR320A-201ENST00000385302 82 ntBASIC1.4□□□□□ -2.19
THBS1P07996 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
THBS1P07996 RNU6-955P-201ENST00000410497 104 ntBASIC1.39□□□□□ -2.19
THBS1P07996 Y_RNA.633-201ENST00000459107 95 ntBASIC1.39□□□□□ -2.19
THBS1P07996 RNU7-174P-201ENST00000516248 59 ntBASIC1.39□□□□□ -2.19
THBS1P07996 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
THBS1P07996 MIR1304-201ENST00000408243 91 ntBASIC1.38□□□□□ -2.19
THBS1P07996 AC006210.1-201ENST00000424882 111 ntBASIC1.38□□□□□ -2.19
THBS1P07996 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.38□□□□□ -2.19
THBS1P07996 U2.7-201ENST00000619197 100 ntBASIC1.38□□□□□ -2.19
THBS1P07996 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.38□□□□□ -2.19
THBS1P07996 SNORD114-24-201ENST00000365029 72 ntBASIC1.37□□□□□ -2.19
THBS1P07996 RPS29P23-201ENST00000458635 123 ntBASIC1.37□□□□□ -2.19
THBS1P07996 snoU13.13-201ENST00000458842 104 ntBASIC1.37□□□□□ -2.19
THBS1P07996 SNORD53B-201ENST00000577887 78 ntBASIC1.37□□□□□ -2.19
THBS1P07996 Y_RNA.125-201ENST00000363371 111 ntBASIC1.36□□□□□ -2.19
THBS1P07996 RNU6-392P-201ENST00000364926 101 ntBASIC1.36□□□□□ -2.19
THBS1P07996 RNU6-936P-201ENST00000384005 107 ntBASIC1.36□□□□□ -2.19
THBS1P07996 SNORA75.1-201ENST00000391130 148 ntBASIC1.36□□□□□ -2.19
THBS1P07996 MIR1323-201ENST00000408090 73 ntBASIC1.36□□□□□ -2.19
THBS1P07996 SNORA31.24-201ENST00000517232 57 ntBASIC1.36□□□□□ -2.19
THBS1P07996 MIR7978-201ENST00000636158 59 ntBASIC1.36□□□□□ -2.19
THBS1P07996 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.36□□□□□ -2.19
THBS1P07996 SNORA67.6-201ENST00000391093 99 ntBASIC1.35□□□□□ -2.19
THBS1P07996 SNORD110-201ENST00000408189 75 ntBASIC1.35□□□□□ -2.19
THBS1P07996 RNU1-42P-201ENST00000364033 160 ntBASIC1.34□□□□□ -2.19
THBS1P07996 SNORD26-201ENST00000384147 75 ntBASIC1.34□□□□□ -2.19
THBS1P07996 RNU6-1184P-201ENST00000384588 108 ntBASIC1.34□□□□□ -2.19
THBS1P07996 MIR652-201ENST00000385278 98 ntBASIC1.34□□□□□ -2.19
THBS1P07996 RNU7-119P-201ENST00000459279 63 ntBASIC1.34□□□□□ -2.19
THBS1P07996 SNORA33.1-201ENST00000364957 130 ntBASIC1.33□□□□□ -2.2
THBS1P07996 MIR618-201ENST00000385287 98 ntBASIC1.33□□□□□ -2.2
THBS1P07996 AL354695.1-201ENST00000427935 228 ntBASIC1.33□□□□□ -2.2
THBS1P07996 RNA5SP268-201ENST00000516828 124 ntBASIC1.33□□□□□ -2.2
THBS1P07996 MIR18A-201ENST00000362310 71 ntBASIC1.32□□□□□ -2.2
THBS1P07996 SNORD124-201ENST00000459577 104 ntBASIC1.32□□□□□ -2.2
THBS1P07996 RNA5SP255-201ENST00000516370 107 ntBASIC1.32□□□□□ -2.2
THBS1P07996 RNA5SP480-201ENST00000516840 109 ntBASIC1.32□□□□□ -2.2
THBS1P07996 MIR26B-201ENST00000362251 77 ntBASIC1.31□□□□□ -2.2
THBS1P07996 SNORD2-201ENST00000459163 69 ntBASIC1.31□□□□□ -2.2
THBS1P07996 RNU1-124P-201ENST00000363861 145 ntBASIC1.3□□□□□ -2.2
THBS1P07996 Y_RNA.246-201ENST00000364495 108 ntBASIC1.3□□□□□ -2.2
THBS1P07996 SNORA25.8-201ENST00000364831 128 ntBASIC1.3□□□□□ -2.2
THBS1P07996 RNU6-42P-201ENST00000384165 107 ntBASIC1.3□□□□□ -2.2
THBS1P07996 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.3□□□□□ -2.2
THBS1P07996 AL021921.1-201ENST00000442774 93 ntBASIC1.3□□□□□ -2.2
THBS1P07996 MIR4473-201ENST00000583731 91 ntBASIC1.3□□□□□ -2.2
THBS1P07996 U4.4-201ENST00000620626 117 ntBASIC1.3□□□□□ -2.2
THBS1P07996 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
THBS1P07996 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
THBS1P07996 MIR548E-201ENST00000408287 88 ntBASIC1.29□□□□□ -2.2
THBS1P07996 RNA5SP61-201ENST00000516453 100 ntBASIC1.29□□□□□ -2.2
THBS1P07996 MIR4421-201ENST00000578133 69 ntBASIC1.29□□□□□ -2.2
THBS1P07996 AC011195.1-201ENST00000578177 177 ntBASIC1.29□□□□□ -2.2
THBS1P07996 MIR7974-201ENST00000615835 79 ntBASIC1.29□□□□□ -2.2
THBS1P07996 MIR6734-201ENST00000621166 68 ntBASIC1.29□□□□□ -2.2
THBS1P07996 SNORD113-4-201ENST00000364802 75 ntBASIC1.28□□□□□ -2.2
THBS1P07996 Y_RNA.327-201ENST00000365201 102 ntBASIC1.28□□□□□ -2.2
THBS1P07996 MIR1276-201ENST00000408707 83 ntBASIC1.28□□□□□ -2.2
THBS1P07996 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.28□□□□□ -2.2
THBS1P07996 MIR5706-201ENST00000579841 80 ntBASIC1.28□□□□□ -2.2
THBS1P07996 U6.96-201ENST00000636425 70 ntBASIC1.28□□□□□ -2.2
THBS1P07996 SNORD99-201ENST00000408612 74 ntBASIC1.27□□□□□ -2.21
THBS1P07996 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.27□□□□□ -2.21
THBS1P07996 MIR6504-201ENST00000613520 61 ntBASIC1.27□□□□□ -2.21
THBS1P07996 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.27□□□□□ -2.21
THBS1P07996 AC244090.1-201ENST00000441884 93 ntBASIC1.26□□□□□ -2.21
THBS1P07996 RNA5SP220-201ENST00000516298 104 ntBASIC1.26□□□□□ -2.21
THBS1P07996 RNA5SP94-201ENST00000516917 108 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 227.4 ms