Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RNU6-635P-201ENST00000516651 102 ntBASIC-1.78□□□□□ -2.69
CTSDP07339 Y_RNA.702-201ENST00000516843 96 ntBASIC-1.78□□□□□ -2.69
CTSDP07339 RNY4P6-201ENST00000363667 96 ntBASIC-1.79□□□□□ -2.7
CTSDP07339 RNU6-80P-201ENST00000384195 107 ntBASIC-1.79□□□□□ -2.7
CTSDP07339 RNU7-154P-201ENST00000516194 62 ntBASIC-1.79□□□□□ -2.7
CTSDP07339 RNA5SP147-201ENST00000516493 109 ntBASIC-1.79□□□□□ -2.7
CTSDP07339 AP002795.1-201ENST00000534879 84 ntBASIC-1.79□□□□□ -2.7
CTSDP07339 AL160413.1-201ENST00000622780 310 ntBASIC-1.79□□□□□ -2.7
CTSDP07339 Y_RNA.216-201ENST00000364205 93 ntBASIC-1.8□□□□□ -2.7
CTSDP07339 RNU4-40P-201ENST00000364351 143 ntBASIC-1.8□□□□□ -2.7
CTSDP07339 RNU6-382P-201ENST00000365181 106 ntBASIC-1.8□□□□□ -2.7
CTSDP07339 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.8□□□□□ -2.7
CTSDP07339 RNU6-540P-201ENST00000384622 101 ntBASIC-1.8□□□□□ -2.7
CTSDP07339 SNORD90-201ENST00000391145 111 ntBASIC-1.8□□□□□ -2.7
CTSDP07339 SNORD58.1-201ENST00000391313 66 ntBASIC-1.8□□□□□ -2.7
CTSDP07339 RNU6-62P-201ENST00000516526 102 ntBASIC-1.8□□□□□ -2.7
CTSDP07339 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.8□□□□□ -2.7
CTSDP07339 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.81□□□□□ -2.7
CTSDP07339 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.81□□□□□ -2.7
CTSDP07339 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.81□□□□□ -2.7
CTSDP07339 RNA5SP86-201ENST00000390869 98 ntBASIC-1.81□□□□□ -2.7
CTSDP07339 RPL35AP4-201ENST00000412007 102 ntBASIC-1.81□□□□□ -2.7
CTSDP07339 RNU6-983P-201ENST00000516004 103 ntBASIC-1.81□□□□□ -2.7
CTSDP07339 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.81□□□□□ -2.7
CTSDP07339 RNU6-238P-201ENST00000363313 106 ntBASIC-1.82□□□□□ -2.7
CTSDP07339 MIR577-201ENST00000385196 96 ntBASIC-1.82□□□□□ -2.7
CTSDP07339 MIR548H1-201ENST00000408610 102 ntBASIC-1.82□□□□□ -2.7
CTSDP07339 RNU2-38P-201ENST00000410856 79 ntBASIC-1.82□□□□□ -2.7
CTSDP07339 MIR3171-201ENST00000584270 74 ntBASIC-1.82□□□□□ -2.7
CTSDP07339 MIR6509-201ENST00000614603 85 ntBASIC-1.82□□□□□ -2.7
CTSDP07339 RNY4P27-201ENST00000363341 96 ntBASIC-1.83□□□□□ -2.7
CTSDP07339 RNU6-915P-201ENST00000364943 103 ntBASIC-1.83□□□□□ -2.7
CTSDP07339 MTATP6P29-201ENST00000415057 132 ntBASIC-1.83□□□□□ -2.7
CTSDP07339 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.83□□□□□ -2.7
CTSDP07339 SNORD4B-201ENST00000459083 72 ntBASIC-1.83□□□□□ -2.7
CTSDP07339 RNU6-732P-201ENST00000516033 103 ntBASIC-1.83□□□□□ -2.7
CTSDP07339 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.83□□□□□ -2.7
CTSDP07339 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.83□□□□□ -2.7
CTSDP07339 MIR4694-201ENST00000578534 80 ntBASIC-1.83□□□□□ -2.7
CTSDP07339 MIR3657-201ENST00000584818 117 ntBASIC-1.83□□□□□ -2.7
CTSDP07339 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.83□□□□□ -2.7
CTSDP07339 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.84□□□□□ -2.7
CTSDP07339 RNU6-151P-201ENST00000364158 107 ntBASIC-1.84□□□□□ -2.7
CTSDP07339 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.84□□□□□ -2.7
CTSDP07339 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.84□□□□□ -2.7
CTSDP07339 MIR203A-201ENST00000384836 110 ntBASIC-1.84□□□□□ -2.7
CTSDP07339 RNU6-644P-201ENST00000391155 98 ntBASIC-1.84□□□□□ -2.7
CTSDP07339 AC090616.4-201ENST00000448026 115 ntBASIC-1.84□□□□□ -2.7
CTSDP07339 MIR4490-201ENST00000582647 84 ntBASIC-1.84□□□□□ -2.7
CTSDP07339 MIR4439-201ENST00000583746 80 ntBASIC-1.84□□□□□ -2.7
CTSDP07339 MIR548Z-201ENST00000584743 97 ntBASIC-1.84□□□□□ -2.7
CTSDP07339 MIR5683-201ENST00000636514 76 ntBASIC-1.84□□□□□ -2.7
CTSDP07339 MIR4773-1-201ENST00000637203 78 ntBASIC-1.84□□□□□ -2.7
CTSDP07339 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.85□□□□□ -2.71
CTSDP07339 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.85□□□□□ -2.71
CTSDP07339 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.85□□□□□ -2.71
CTSDP07339 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.85□□□□□ -2.71
CTSDP07339 RNU6-168P-201ENST00000516189 101 ntBASIC-1.85□□□□□ -2.71
CTSDP07339 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.86□□□□□ -2.71
CTSDP07339 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.86□□□□□ -2.71
CTSDP07339 SNORA33.2-201ENST00000365413 134 ntBASIC-1.86□□□□□ -2.71
CTSDP07339 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.86□□□□□ -2.71
CTSDP07339 RNU6-639P-201ENST00000384074 107 ntBASIC-1.86□□□□□ -2.71
CTSDP07339 MIR521-2-201ENST00000384818 87 ntBASIC-1.86□□□□□ -2.71
CTSDP07339 SNORD19-201ENST00000391191 68 ntBASIC-1.86□□□□□ -2.71
CTSDP07339 RNA5SP272-201ENST00000516095 111 ntBASIC-1.86□□□□□ -2.71
CTSDP07339 RNU4-71P-201ENST00000516258 113 ntBASIC-1.86□□□□□ -2.71
CTSDP07339 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.87□□□□□ -2.71
CTSDP07339 RNU6-832P-201ENST00000363319 107 ntBASIC-1.87□□□□□ -2.71
CTSDP07339 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.87□□□□□ -2.71
CTSDP07339 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.87□□□□□ -2.71
CTSDP07339 MIR519A2-201ENST00000384990 87 ntBASIC-1.87□□□□□ -2.71
CTSDP07339 RNU7-88P-201ENST00000458752 63 ntBASIC-1.87□□□□□ -2.71
CTSDP07339 RNU7-197P-201ENST00000458836 62 ntBASIC-1.87□□□□□ -2.71
CTSDP07339 AC020661.2-201ENST00000560114 134 ntBASIC-1.87□□□□□ -2.71
CTSDP07339 RNU5F-1-201ENST00000362507 117 ntBASIC-1.88□□□□□ -2.71
CTSDP07339 RNU6-774P-201ENST00000363238 107 ntBASIC-1.88□□□□□ -2.71
CTSDP07339 RNU6-824P-201ENST00000363724 104 ntBASIC-1.88□□□□□ -2.71
CTSDP07339 RNU6-704P-201ENST00000364162 103 ntBASIC-1.88□□□□□ -2.71
CTSDP07339 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.88□□□□□ -2.71
CTSDP07339 RNA5SP292-201ENST00000390974 118 ntBASIC-1.88□□□□□ -2.71
CTSDP07339 RNU6-460P-201ENST00000391158 108 ntBASIC-1.88□□□□□ -2.71
CTSDP07339 MIR548I1-201ENST00000408810 149 ntBASIC-1.88□□□□□ -2.71
CTSDP07339 AL691482.2-201ENST00000457453 84 ntBASIC-1.88□□□□□ -2.71
CTSDP07339 RNU4-11P-201ENST00000365287 132 ntBASIC-1.89□□□□□ -2.71
CTSDP07339 MIR487B-201ENST00000385021 84 ntBASIC-1.89□□□□□ -2.71
CTSDP07339 RNU6-519P-201ENST00000410590 108 ntBASIC-1.89□□□□□ -2.71
CTSDP07339 MTATP8P1-201ENST00000467115 207 ntBASIC-1.89□□□□□ -2.71
CTSDP07339 RNU6-518P-201ENST00000516056 96 ntBASIC-1.89□□□□□ -2.71
CTSDP07339 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.89□□□□□ -2.71
CTSDP07339 SNORA18.5-201ENST00000516616 101 ntBASIC-1.89□□□□□ -2.71
CTSDP07339 MIR548AG1-201ENST00000579932 66 ntBASIC-1.89□□□□□ -2.71
CTSDP07339 RNY3P2-201ENST00000362918 102 ntBASIC-1.9□□□□□ -2.71
CTSDP07339 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.9□□□□□ -2.71
CTSDP07339 RNU6-781P-201ENST00000516377 101 ntBASIC-1.9□□□□□ -2.71
CTSDP07339 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.9□□□□□ -2.71
CTSDP07339 SNORD18.1-201ENST00000363807 70 ntBASIC-1.91□□□□□ -2.72
CTSDP07339 SNORD45B-201ENST00000364617 72 ntBASIC-1.91□□□□□ -2.72
CTSDP07339 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.91□□□□□ -2.72
CTSDP07339 AL021921.1-201ENST00000442774 93 ntBASIC-1.91□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 203.2 ms