Protein–RNA interactions for Protein: P04156

PRNP, Major prion protein, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRNPP04156 MIR3678-201ENST00000578455 94 ntBASIC1.31□□□□□ -2.2
PRNPP04156 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
PRNPP04156 MIR758-201ENST00000390227 88 ntBASIC1.3□□□□□ -2.2
PRNPP04156 RNA5SP61-201ENST00000516453 100 ntBASIC1.3□□□□□ -2.2
PRNPP04156 RNU6-1110P-201ENST00000516462 101 ntBASIC1.3□□□□□ -2.2
PRNPP04156 SNORA25-201ENST00000384384 134 ntBASIC1.29□□□□□ -2.2
PRNPP04156 MIR517B-201ENST00000385102 67 ntBASIC1.29□□□□□ -2.2
PRNPP04156 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.29□□□□□ -2.2
PRNPP04156 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
PRNPP04156 SNORD26-201ENST00000384147 75 ntBASIC1.28□□□□□ -2.2
PRNPP04156 SNORA8.2-201ENST00000384372 139 ntBASIC1.28□□□□□ -2.2
PRNPP04156 SNORD113-2-201ENST00000391082 72 ntBASIC1.28□□□□□ -2.2
PRNPP04156 RNU6-955P-201ENST00000410497 104 ntBASIC1.28□□□□□ -2.2
PRNPP04156 MIR3612-201ENST00000579753 87 ntBASIC1.28□□□□□ -2.2
PRNPP04156 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
PRNPP04156 RNU6-1312P-201ENST00000362425 108 ntBASIC1.27□□□□□ -2.21
PRNPP04156 RNA5SP327-201ENST00000362494 101 ntBASIC1.27□□□□□ -2.21
PRNPP04156 FABP5P4-201ENST00000437203 171 ntBASIC1.27□□□□□ -2.21
PRNPP04156 RPS29P23-201ENST00000458635 123 ntBASIC1.27□□□□□ -2.21
PRNPP04156 SCARNA16.5-201ENST00000517114 183 ntBASIC1.27□□□□□ -2.21
PRNPP04156 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
PRNPP04156 SNORA33.1-201ENST00000364957 130 ntBASIC1.26□□□□□ -2.21
PRNPP04156 U7.7-201ENST00000459276 60 ntBASIC1.26□□□□□ -2.21
PRNPP04156 U2.7-201ENST00000619197 100 ntBASIC1.26□□□□□ -2.21
PRNPP04156 RNU6-1184P-201ENST00000384588 108 ntBASIC1.25□□□□□ -2.21
PRNPP04156 MIR573-201ENST00000384964 99 ntBASIC1.25□□□□□ -2.21
PRNPP04156 uc_338.10-201ENST00000621872 182 ntBASIC1.25□□□□□ -2.21
PRNPP04156 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.25□□□□□ -2.21
PRNPP04156 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
PRNPP04156 RNU6-698P-201ENST00000363523 107 ntBASIC1.24□□□□□ -2.21
PRNPP04156 RNU6-34P-201ENST00000364874 107 ntBASIC1.24□□□□□ -2.21
PRNPP04156 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
PRNPP04156 RNA5SP227-201ENST00000516184 113 ntBASIC1.24□□□□□ -2.21
PRNPP04156 RNU7-174P-201ENST00000516248 59 ntBASIC1.24□□□□□ -2.21
PRNPP04156 MIR4473-201ENST00000583731 91 ntBASIC1.24□□□□□ -2.21
PRNPP04156 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
PRNPP04156 Y_RNA.125-201ENST00000363371 111 ntBASIC1.23□□□□□ -2.21
PRNPP04156 SNORA63.6-201ENST00000364921 119 ntBASIC1.23□□□□□ -2.21
PRNPP04156 Y_RNA.407-201ENST00000383986 113 ntBASIC1.23□□□□□ -2.21
PRNPP04156 SNORA15B-2-201ENST00000384058 135 ntBASIC1.23□□□□□ -2.21
PRNPP04156 SNORA15B-1-201ENST00000384334 135 ntBASIC1.23□□□□□ -2.21
PRNPP04156 MIR652-201ENST00000385278 98 ntBASIC1.23□□□□□ -2.21
PRNPP04156 AC068338.1-201ENST00000565567 176 ntBASIC1.23□□□□□ -2.21
PRNPP04156 U4.4-201ENST00000620626 117 ntBASIC1.23□□□□□ -2.21
PRNPP04156 MIR26B-201ENST00000362251 77 ntBASIC1.22□□□□□ -2.21
PRNPP04156 AC006210.1-201ENST00000424882 111 ntBASIC1.22□□□□□ -2.21
PRNPP04156 SNORD124-201ENST00000459577 104 ntBASIC1.22□□□□□ -2.21
PRNPP04156 SCARNA17.3-201ENST00000516381 125 ntBASIC1.22□□□□□ -2.21
PRNPP04156 MIR548AE1-201ENST00000583292 70 ntBASIC1.21□□□□□ -2.22
PRNPP04156 MIR7974-201ENST00000615835 79 ntBASIC1.21□□□□□ -2.22
PRNPP04156 MIR8070-201ENST00000616510 88 ntBASIC1.21□□□□□ -2.22
PRNPP04156 AL162376.1-201ENST00000624117 175 ntBASIC1.21□□□□□ -2.22
PRNPP04156 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
PRNPP04156 MIR582-201ENST00000365731 98 ntBASIC1.2□□□□□ -2.22
PRNPP04156 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.2□□□□□ -2.22
PRNPP04156 SNORD110-201ENST00000408189 75 ntBASIC1.19□□□□□ -2.22
PRNPP04156 Y_RNA.633-201ENST00000459107 95 ntBASIC1.19□□□□□ -2.22
PRNPP04156 MIR548AD-201ENST00000584780 82 ntBASIC1.19□□□□□ -2.22
PRNPP04156 SNORA9.1-201ENST00000362412 131 ntBASIC1.17□□□□□ -2.22
PRNPP04156 Y_RNA.246-201ENST00000364495 108 ntBASIC1.17□□□□□ -2.22
PRNPP04156 MIR548E-201ENST00000408287 88 ntBASIC1.17□□□□□ -2.22
PRNPP04156 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.17□□□□□ -2.22
PRNPP04156 AC011195.1-201ENST00000578177 177 ntBASIC1.17□□□□□ -2.22
PRNPP04156 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.17□□□□□ -2.22
PRNPP04156 Y_RNA.325-201ENST00000365171 122 ntBASIC1.16□□□□□ -2.22
PRNPP04156 MIR19B1-201ENST00000384829 87 ntBASIC1.16□□□□□ -2.22
PRNPP04156 MIR200A-201ENST00000384875 90 ntBASIC1.16□□□□□ -2.22
PRNPP04156 RNA5SP268-201ENST00000516828 124 ntBASIC1.16□□□□□ -2.22
PRNPP04156 AC025627.3-201ENST00000582078 182 ntBASIC1.16□□□□□ -2.22
PRNPP04156 MIR6828-201ENST00000636181 60 ntBASIC1.16□□□□□ -2.22
PRNPP04156 U6.96-201ENST00000636425 70 ntBASIC1.16□□□□□ -2.22
PRNPP04156 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
PRNPP04156 MIR18A-201ENST00000362310 71 ntBASIC1.15□□□□□ -2.23
PRNPP04156 SNORA25.8-201ENST00000364831 128 ntBASIC1.15□□□□□ -2.23
PRNPP04156 RNU6-520P-201ENST00000384717 104 ntBASIC1.15□□□□□ -2.23
PRNPP04156 SNORA41B-201ENST00000384785 128 ntBASIC1.15□□□□□ -2.23
PRNPP04156 RNU6-1246P-201ENST00000391064 107 ntBASIC1.15□□□□□ -2.23
PRNPP04156 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.15□□□□□ -2.23
PRNPP04156 MIR4295-201ENST00000585286 85 ntBASIC1.15□□□□□ -2.23
PRNPP04156 SNORA36.1-201ENST00000363424 132 ntBASIC1.14□□□□□ -2.23
PRNPP04156 MIR499A-201ENST00000384903 122 ntBASIC1.14□□□□□ -2.23
PRNPP04156 SNORD99-201ENST00000408612 74 ntBASIC1.14□□□□□ -2.23
PRNPP04156 RNA5SP247-201ENST00000411181 105 ntBASIC1.14□□□□□ -2.23
PRNPP04156 RNU4-88P-201ENST00000411220 86 ntBASIC1.14□□□□□ -2.23
PRNPP04156 AC087343.1-201ENST00000477341 475 ntBASIC1.14□□□□□ -2.23
PRNPP04156 RNA5SP102-201ENST00000516865 106 ntBASIC1.14□□□□□ -2.23
PRNPP04156 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.14□□□□□ -2.23
PRNPP04156 Y_RNA.379-201ENST00000365653 102 ntBASIC1.13□□□□□ -2.23
PRNPP04156 MIR618-201ENST00000385287 98 ntBASIC1.13□□□□□ -2.23
PRNPP04156 MIR1276-201ENST00000408707 83 ntBASIC1.13□□□□□ -2.23
PRNPP04156 CYP3A54P-201ENST00000566950 75 ntBASIC1.13□□□□□ -2.23
PRNPP04156 MIR7107-201ENST00000611489 80 ntBASIC1.13□□□□□ -2.23
PRNPP04156 Y_RNA.226-201ENST00000364337 114 ntBASIC1.12□□□□□ -2.23
PRNPP04156 RNU7-119P-201ENST00000459279 63 ntBASIC1.12□□□□□ -2.23
PRNPP04156 RNU6-518P-201ENST00000516056 96 ntBASIC1.12□□□□□ -2.23
PRNPP04156 MIR4752-201ENST00000579672 72 ntBASIC1.12□□□□□ -2.23
PRNPP04156 SNORA70.25-201ENST00000612741 95 ntBASIC1.12□□□□□ -2.23
PRNPP04156 SNORD114-24-201ENST00000365029 72 ntBASIC1.11□□□□□ -2.23
PRNPP04156 RNA5SP94-201ENST00000516917 108 ntBASIC1.11□□□□□ -2.23
PRNPP04156 MIR6504-201ENST00000613520 61 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 330.4 ms