Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 U3.27-201ENST00000391237 200 ntBASIC0.61□□□□□ -2.31
LDLRP01130 Y_RNA.606-201ENST00000410579 103 ntBASIC0.61□□□□□ -2.31
LDLRP01130 RNU6-135P-201ENST00000516769 101 ntBASIC0.61□□□□□ -2.31
LDLRP01130 RNU6-303P-201ENST00000517091 106 ntBASIC0.61□□□□□ -2.31
LDLRP01130 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.61□□□□□ -2.31
LDLRP01130 U7.4-201ENST00000614961 63 ntBASIC0.61□□□□□ -2.31
LDLRP01130 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.61□□□□□ -2.31
LDLRP01130 MIR664A-201ENST00000626086 82 ntBASIC0.61□□□□□ -2.31
LDLRP01130 RNU5F-1-201ENST00000362507 117 ntBASIC0.6□□□□□ -2.31
LDLRP01130 Y_RNA.371-201ENST00000365591 113 ntBASIC0.6□□□□□ -2.31
LDLRP01130 AC097510.1-201ENST00000510945 133 ntBASIC0.6□□□□□ -2.31
LDLRP01130 RNU6-469P-201ENST00000516253 101 ntBASIC0.6□□□□□ -2.31
LDLRP01130 SCARNA16.5-201ENST00000517114 183 ntBASIC0.6□□□□□ -2.31
LDLRP01130 U6.81-201ENST00000612550 106 ntBASIC0.6□□□□□ -2.31
LDLRP01130 MIR548O2-201ENST00000616090 70 ntBASIC0.6□□□□□ -2.31
LDLRP01130 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
LDLRP01130 RNU6-154P-201ENST00000384306 106 ntBASIC0.59□□□□□ -2.31
LDLRP01130 RNU6-1177P-201ENST00000391058 104 ntBASIC0.59□□□□□ -2.31
LDLRP01130 RNU6-269P-201ENST00000391077 97 ntBASIC0.59□□□□□ -2.31
LDLRP01130 RNU2-59P-201ENST00000410482 191 ntBASIC0.59□□□□□ -2.31
LDLRP01130 RNU6-382P-201ENST00000365181 106 ntBASIC0.58□□□□□ -2.32
LDLRP01130 Y_RNA.565-201ENST00000384719 101 ntBASIC0.58□□□□□ -2.32
LDLRP01130 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
LDLRP01130 RNA5SP94-201ENST00000516917 108 ntBASIC0.58□□□□□ -2.32
LDLRP01130 RNU6-1057P-201ENST00000517162 102 ntBASIC0.58□□□□□ -2.32
LDLRP01130 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.58□□□□□ -2.32
LDLRP01130 RNU6-495P-201ENST00000362995 107 ntBASIC0.57□□□□□ -2.32
LDLRP01130 RNU6-54P-201ENST00000365563 107 ntBASIC0.57□□□□□ -2.32
LDLRP01130 AC098934.3-201ENST00000430450 190 ntBASIC0.57□□□□□ -2.32
LDLRP01130 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
LDLRP01130 AL162376.1-201ENST00000624117 175 ntBASIC0.57□□□□□ -2.32
LDLRP01130 MIR1297-201ENST00000637311 77 ntBASIC0.57□□□□□ -2.32
LDLRP01130 RNU1-141P-201ENST00000364623 158 ntBASIC0.56□□□□□ -2.32
LDLRP01130 MIR140-201ENST00000385282 100 ntBASIC0.56□□□□□ -2.32
LDLRP01130 MT-TY-201ENST00000387409 66 ntBASIC0.56□□□□□ -2.32
LDLRP01130 SNORD42B-201ENST00000458893 67 ntBASIC0.56□□□□□ -2.32
LDLRP01130 RNU6-687P-201ENST00000516443 89 ntBASIC0.56□□□□□ -2.32
LDLRP01130 NAMPTP3-201ENST00000569273 224 ntBASIC0.56□□□□□ -2.32
LDLRP01130 MIR7107-201ENST00000611489 80 ntBASIC0.56□□□□□ -2.32
LDLRP01130 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.56□□□□□ -2.32
LDLRP01130 MIR2909-201ENST00000617113 69 ntBASIC0.56□□□□□ -2.32
LDLRP01130 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.56□□□□□ -2.32
LDLRP01130 RNA5SP499-201ENST00000363982 119 ntBASIC0.55□□□□□ -2.32
LDLRP01130 RNU6V-201ENST00000384105 107 ntBASIC0.55□□□□□ -2.32
LDLRP01130 SNORA8.2-201ENST00000384372 139 ntBASIC0.55□□□□□ -2.32
LDLRP01130 RNU6-380P-201ENST00000410207 107 ntBASIC0.55□□□□□ -2.32
LDLRP01130 RNA5SP484-201ENST00000458857 111 ntBASIC0.55□□□□□ -2.32
LDLRP01130 RNU7-24P-201ENST00000458867 62 ntBASIC0.55□□□□□ -2.32
LDLRP01130 RNU6-807P-201ENST00000516805 107 ntBASIC0.55□□□□□ -2.32
LDLRP01130 RNA5SP268-201ENST00000516828 124 ntBASIC0.55□□□□□ -2.32
LDLRP01130 RNU4-45P-201ENST00000365469 141 ntBASIC0.54□□□□□ -2.32
LDLRP01130 RNU6-945P-201ENST00000383947 107 ntBASIC0.54□□□□□ -2.32
LDLRP01130 MIR548L-201ENST00000408303 86 ntBASIC0.54□□□□□ -2.32
LDLRP01130 SNORD75.2-201ENST00000408784 58 ntBASIC0.54□□□□□ -2.32
LDLRP01130 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.54□□□□□ -2.32
LDLRP01130 RNA5SP227-201ENST00000516184 113 ntBASIC0.54□□□□□ -2.32
LDLRP01130 RNU4-54P-201ENST00000516428 129 ntBASIC0.54□□□□□ -2.32
LDLRP01130 RNU6-70P-201ENST00000516438 60 ntBASIC0.54□□□□□ -2.32
LDLRP01130 RNU6-1015P-201ENST00000517121 99 ntBASIC0.54□□□□□ -2.32
LDLRP01130 AC018659.1-201ENST00000551083 169 ntBASIC0.54□□□□□ -2.32
LDLRP01130 RNU1-29P-201ENST00000606574 126 ntBASIC0.54□□□□□ -2.32
LDLRP01130 MIR5087-201ENST00000635826 76 ntBASIC0.54□□□□□ -2.32
LDLRP01130 MIR4773-1-201ENST00000637203 78 ntBASIC0.54□□□□□ -2.32
LDLRP01130 RNA5SP517-201ENST00000364724 117 ntBASIC0.53□□□□□ -2.32
LDLRP01130 RNU6-411P-201ENST00000384451 107 ntBASIC0.53□□□□□ -2.32
LDLRP01130 Y_RNA.545-201ENST00000384652 105 ntBASIC0.53□□□□□ -2.32
LDLRP01130 MIR216B-201ENST00000390186 82 ntBASIC0.53□□□□□ -2.32
LDLRP01130 RNU7-74P-201ENST00000459104 62 ntBASIC0.53□□□□□ -2.32
LDLRP01130 HAR1A.1-201ENST00000459583 118 ntBASIC0.53□□□□□ -2.32
LDLRP01130 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.53□□□□□ -2.32
LDLRP01130 RNU6-229P-201ENST00000516614 102 ntBASIC0.53□□□□□ -2.32
LDLRP01130 SNORA40.17-201ENST00000517256 115 ntBASIC0.53□□□□□ -2.32
LDLRP01130 MIR4752-201ENST00000579672 72 ntBASIC0.53□□□□□ -2.32
LDLRP01130 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
LDLRP01130 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.53□□□□□ -2.32
LDLRP01130 RNU6-681P-201ENST00000364012 104 ntBASIC0.52□□□□□ -2.33
LDLRP01130 SNORA8.1-201ENST00000384250 140 ntBASIC0.52□□□□□ -2.33
LDLRP01130 RNU6-35P-201ENST00000384530 107 ntBASIC0.52□□□□□ -2.33
LDLRP01130 RNU5B-6P-201ENST00000516765 68 ntBASIC0.52□□□□□ -2.33
LDLRP01130 MIR4460-201ENST00000577862 86 ntBASIC0.52□□□□□ -2.33
LDLRP01130 MIR3675-201ENST00000583661 73 ntBASIC0.52□□□□□ -2.33
LDLRP01130 SNORD115-31-201ENST00000365318 82 ntBASIC0.51□□□□□ -2.33
LDLRP01130 RNU6-1039P-201ENST00000383931 107 ntBASIC0.51□□□□□ -2.33
LDLRP01130 RNU6-1241P-201ENST00000384536 107 ntBASIC0.51□□□□□ -2.33
LDLRP01130 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
LDLRP01130 SNORA70.25-201ENST00000612741 95 ntBASIC0.51□□□□□ -2.33
LDLRP01130 SNORD118-201ENST00000363593 134 ntBASIC0.5□□□□□ -2.33
LDLRP01130 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
LDLRP01130 RNU6-587P-201ENST00000391282 106 ntBASIC0.5□□□□□ -2.33
LDLRP01130 AC069271.1-201ENST00000445577 156 ntBASIC0.5□□□□□ -2.33
LDLRP01130 RNU6-274P-201ENST00000459566 107 ntBASIC0.5□□□□□ -2.33
LDLRP01130 AC139453.2-201ENST00000487255 133 ntBASIC0.5□□□□□ -2.33
LDLRP01130 SNORA25.18-201ENST00000607153 114 ntBASIC0.5□□□□□ -2.33
LDLRP01130 AC243829.6-201ENST00000612652 106 ntBASIC0.5□□□□□ -2.33
LDLRP01130 AC069503.3-201ENST00000618674 145 ntBASIC0.5□□□□□ -2.33
LDLRP01130 AC092634.7-201ENST00000621022 103 ntBASIC0.5□□□□□ -2.33
LDLRP01130 MIR203A-201ENST00000384836 110 ntBASIC0.49□□□□□ -2.33
LDLRP01130 RNU6-634P-201ENST00000459134 106 ntBASIC0.49□□□□□ -2.33
LDLRP01130 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.49□□□□□ -2.33
LDLRP01130 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 182 ms