Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 SNORD115-31-201ENST00000365318 82 ntBASIC0.93□□□□□ -2.26
CNOT4O95628 MT-TY-201ENST00000387409 66 ntBASIC0.93□□□□□ -2.26
CNOT4O95628 RNU6-269P-201ENST00000391077 97 ntBASIC0.93□□□□□ -2.26
CNOT4O95628 MIR8053-201ENST00000613344 75 ntBASIC0.93□□□□□ -2.26
CNOT4O95628 SNORA8.2-201ENST00000384372 139 ntBASIC0.92□□□□□ -2.26
CNOT4O95628 RNU6-649P-201ENST00000384463 107 ntBASIC0.92□□□□□ -2.26
CNOT4O95628 RNU6-540P-201ENST00000384622 101 ntBASIC0.92□□□□□ -2.26
CNOT4O95628 RPL39P28-201ENST00000465655 155 ntBASIC0.92□□□□□ -2.26
CNOT4O95628 RNA5SP227-201ENST00000516184 113 ntBASIC0.92□□□□□ -2.26
CNOT4O95628 AL353765.1-201ENST00000605514 183 ntBASIC0.92□□□□□ -2.26
CNOT4O95628 AL162376.1-201ENST00000624117 175 ntBASIC0.92□□□□□ -2.26
CNOT4O95628 SNORA36.1-201ENST00000363424 132 ntBASIC0.91□□□□□ -2.26
CNOT4O95628 RNU6-1039P-201ENST00000383931 107 ntBASIC0.91□□□□□ -2.26
CNOT4O95628 SNORD45A-201ENST00000384512 84 ntBASIC0.91□□□□□ -2.26
CNOT4O95628 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.91□□□□□ -2.26
CNOT4O95628 MIR6509-201ENST00000614603 85 ntBASIC0.91□□□□□ -2.26
CNOT4O95628 SNORD115-22-201ENST00000364456 82 ntBASIC0.9□□□□□ -2.27
CNOT4O95628 RNU6-604P-201ENST00000390917 100 ntBASIC0.9□□□□□ -2.27
CNOT4O95628 SNORD30.1-201ENST00000391309 70 ntBASIC0.9□□□□□ -2.27
CNOT4O95628 RNA5SP222-201ENST00000411039 105 ntBASIC0.9□□□□□ -2.27
CNOT4O95628 RNA5SP436-201ENST00000516020 115 ntBASIC0.9□□□□□ -2.27
CNOT4O95628 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.9□□□□□ -2.27
CNOT4O95628 RNA5SP94-201ENST00000516917 108 ntBASIC0.9□□□□□ -2.27
CNOT4O95628 MIR5000-201ENST00000577717 103 ntBASIC0.9□□□□□ -2.27
CNOT4O95628 SNORD114-21-201ENST00000606412 72 ntBASIC0.9□□□□□ -2.27
CNOT4O95628 MIR6857-201ENST00000613267 93 ntBASIC0.9□□□□□ -2.27
CNOT4O95628 RNU4-38P-201ENST00000364472 129 ntBASIC0.89□□□□□ -2.27
CNOT4O95628 RNU6-895P-201ENST00000384125 103 ntBASIC0.89□□□□□ -2.27
CNOT4O95628 RNU6-663P-201ENST00000391105 106 ntBASIC0.89□□□□□ -2.27
CNOT4O95628 RNA5SP484-201ENST00000458857 111 ntBASIC0.89□□□□□ -2.27
CNOT4O95628 RNA5SP268-201ENST00000516828 124 ntBASIC0.89□□□□□ -2.27
CNOT4O95628 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.88□□□□□ -2.27
CNOT4O95628 SNORD42B-201ENST00000458893 67 ntBASIC0.88□□□□□ -2.27
CNOT4O95628 RNU6-881P-201ENST00000516813 102 ntBASIC0.88□□□□□ -2.27
CNOT4O95628 MIR4653-201ENST00000585107 83 ntBASIC0.88□□□□□ -2.27
CNOT4O95628 AC069503.3-201ENST00000618674 145 ntBASIC0.88□□□□□ -2.27
CNOT4O95628 Y_RNA.374-201ENST00000365606 101 ntBASIC0.87□□□□□ -2.27
CNOT4O95628 MIR203A-201ENST00000384836 110 ntBASIC0.87□□□□□ -2.27
CNOT4O95628 MIR532-201ENST00000385025 91 ntBASIC0.87□□□□□ -2.27
CNOT4O95628 MIR216A-201ENST00000385063 110 ntBASIC0.87□□□□□ -2.27
CNOT4O95628 RN7SL793P-201ENST00000583259 296 ntBASIC0.87□□□□□ -2.27
CNOT4O95628 AC103810.9-201ENST00000606688 112 ntBASIC0.87□□□□□ -2.27
CNOT4O95628 AC073869.9-201ENST00000641610 120 ntBASIC0.87□□□□□ -2.27
CNOT4O95628 MIR373-201ENST00000362273 69 ntBASIC0.86□□□□□ -2.27
CNOT4O95628 MIR7107-201ENST00000611489 80 ntBASIC0.86□□□□□ -2.27
CNOT4O95628 U6.111-201ENST00000636093 83 ntBASIC0.86□□□□□ -2.27
CNOT4O95628 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
CNOT4O95628 SNORD113.1-201ENST00000363280 73 ntBASIC0.85□□□□□ -2.27
CNOT4O95628 RNU6-110P-201ENST00000384508 104 ntBASIC0.85□□□□□ -2.27
CNOT4O95628 RNU5B-6P-201ENST00000516765 68 ntBASIC0.85□□□□□ -2.27
CNOT4O95628 MIR3657-201ENST00000584818 117 ntBASIC0.85□□□□□ -2.27
CNOT4O95628 CYP3A137P-201ENST00000562436 69 ntBASIC0.84□□□□□ -2.27
CNOT4O95628 SNORD114-4-201ENST00000363962 75 ntBASIC0.83□□□□□ -2.28
CNOT4O95628 RNY1P8-201ENST00000383970 114 ntBASIC0.83□□□□□ -2.28
CNOT4O95628 SNORA36.2-201ENST00000384004 127 ntBASIC0.83□□□□□ -2.28
CNOT4O95628 RNU6-260P-201ENST00000384092 107 ntBASIC0.83□□□□□ -2.28
CNOT4O95628 AC006210.1-201ENST00000424882 111 ntBASIC0.83□□□□□ -2.28
CNOT4O95628 AC018659.1-201ENST00000551083 169 ntBASIC0.83□□□□□ -2.28
CNOT4O95628 RNU6-1216P-201ENST00000362590 107 ntBASIC0.82□□□□□ -2.28
CNOT4O95628 RNU6-800P-201ENST00000384473 103 ntBASIC0.82□□□□□ -2.28
CNOT4O95628 MIR140-201ENST00000385282 100 ntBASIC0.82□□□□□ -2.28
CNOT4O95628 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
CNOT4O95628 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
CNOT4O95628 MIR3973-201ENST00000579824 107 ntBASIC0.82□□□□□ -2.28
CNOT4O95628 SNORA2.1-201ENST00000363089 137 ntBASIC0.81□□□□□ -2.28
CNOT4O95628 RNU6-990P-201ENST00000364385 104 ntBASIC0.81□□□□□ -2.28
CNOT4O95628 Y_RNA.386-201ENST00000383913 105 ntBASIC0.81□□□□□ -2.28
CNOT4O95628 SNORD116-24-201ENST00000384549 92 ntBASIC0.8□□□□□ -2.28
CNOT4O95628 RNU6-630P-201ENST00000391258 106 ntBASIC0.8□□□□□ -2.28
CNOT4O95628 SNORD110-201ENST00000408189 75 ntBASIC0.8□□□□□ -2.28
CNOT4O95628 AC125388.1-201ENST00000459631 156 ntBASIC0.8□□□□□ -2.28
CNOT4O95628 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.8□□□□□ -2.28
CNOT4O95628 RNA5SP517-201ENST00000364724 117 ntBASIC0.79□□□□□ -2.28
CNOT4O95628 Y_RNA.340-201ENST00000365330 92 ntBASIC0.79□□□□□ -2.28
CNOT4O95628 Y_RNA.407-201ENST00000383986 113 ntBASIC0.79□□□□□ -2.28
CNOT4O95628 Y_RNA.443-201ENST00000384135 111 ntBASIC0.79□□□□□ -2.28
CNOT4O95628 RNU6-982P-201ENST00000516216 102 ntBASIC0.79□□□□□ -2.28
CNOT4O95628 AC005520.4-201ENST00000604337 90 ntBASIC0.79□□□□□ -2.28
CNOT4O95628 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CNOT4O95628 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
CNOT4O95628 SNORA25.4-201ENST00000363666 124 ntBASIC0.78□□□□□ -2.28
CNOT4O95628 MIR193B-201ENST00000384907 83 ntBASIC0.78□□□□□ -2.28
CNOT4O95628 MTND4LP1-201ENST00000446263 157 ntBASIC0.78□□□□□ -2.28
CNOT4O95628 SNORA40.17-201ENST00000517256 115 ntBASIC0.78□□□□□ -2.28
CNOT4O95628 MIR4473-201ENST00000583731 91 ntBASIC0.78□□□□□ -2.28
CNOT4O95628 SNORA70.25-201ENST00000612741 95 ntBASIC0.78□□□□□ -2.28
CNOT4O95628 AC092634.7-201ENST00000621022 103 ntBASIC0.78□□□□□ -2.28
CNOT4O95628 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.78□□□□□ -2.28
CNOT4O95628 MIR146A-201ENST00000385201 99 ntBASIC0.77□□□□□ -2.29
CNOT4O95628 RNA5SP147-201ENST00000516493 109 ntBASIC0.77□□□□□ -2.29
CNOT4O95628 MIR4698-201ENST00000577795 80 ntBASIC0.77□□□□□ -2.29
CNOT4O95628 MIR4752-201ENST00000579672 72 ntBASIC0.77□□□□□ -2.29
CNOT4O95628 Y_RNA.30-201ENST00000362572 97 ntBASIC0.76□□□□□ -2.29
CNOT4O95628 MIR1265-201ENST00000408444 86 ntBASIC0.76□□□□□ -2.29
CNOT4O95628 SNORA25.18-201ENST00000607153 114 ntBASIC0.76□□□□□ -2.29
CNOT4O95628 RNU6-645P-201ENST00000364649 106 ntBASIC0.75□□□□□ -2.29
CNOT4O95628 SCARNA17.3-201ENST00000516381 125 ntBASIC0.75□□□□□ -2.29
CNOT4O95628 MIR1273G-201ENST00000577677 100 ntBASIC0.75□□□□□ -2.29
CNOT4O95628 MIR4714-201ENST00000580728 77 ntBASIC0.75□□□□□ -2.29
CNOT4O95628 MIR548AE1-201ENST00000583292 70 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 224 ms