Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 MIR487B-201ENST00000385021 84 ntBASIC-2.09□□□□□ -2.74
SNX4O95219 AC090616.4-201ENST00000448026 115 ntBASIC-2.09□□□□□ -2.74
SNX4O95219 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.09□□□□□ -2.74
SNX4O95219 Y_RNA.754-201ENST00000476024 102 ntBASIC-2.09□□□□□ -2.74
SNX4O95219 RNU6-1219P-201ENST00000516143 112 ntBASIC-2.09□□□□□ -2.74
SNX4O95219 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.09□□□□□ -2.74
SNX4O95219 RNU6-1271P-201ENST00000517049 105 ntBASIC-2.09□□□□□ -2.74
SNX4O95219 Y_RNA.720-201ENST00000517166 92 ntBASIC-2.09□□□□□ -2.74
SNX4O95219 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-2.09□□□□□ -2.74
SNX4O95219 Y_RNA.790-201ENST00000614282 102 ntBASIC-2.09□□□□□ -2.74
SNX4O95219 Y_RNA.782-201ENST00000614695 102 ntBASIC-2.09□□□□□ -2.74
SNX4O95219 SNORA33.1-201ENST00000364957 130 ntBASIC-2.1□□□□□ -2.75
SNX4O95219 RNU6-132P-201ENST00000383863 107 ntBASIC-2.1□□□□□ -2.75
SNX4O95219 MIR548A1-201ENST00000385041 97 ntBASIC-2.1□□□□□ -2.75
SNX4O95219 RPL35AP4-201ENST00000412007 102 ntBASIC-2.1□□□□□ -2.75
SNX4O95219 RNU7-85P-201ENST00000458851 63 ntBASIC-2.1□□□□□ -2.75
SNX4O95219 MIR4723-201ENST00000585070 81 ntBASIC-2.1□□□□□ -2.75
SNX4O95219 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.1□□□□□ -2.75
SNX4O95219 Y_RNA.181-201ENST00000363872 101 ntBASIC-2.11□□□□□ -2.75
SNX4O95219 SNORD19-201ENST00000391191 68 ntBASIC-2.11□□□□□ -2.75
SNX4O95219 MIR1263-201ENST00000408324 86 ntBASIC-2.11□□□□□ -2.75
SNX4O95219 AC025521.1-201ENST00000621624 286 ntBASIC-2.11□□□□□ -2.75
SNX4O95219 Y_RNA.233-201ENST00000364407 101 ntBASIC-2.12□□□□□ -2.75
SNX4O95219 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.12□□□□□ -2.75
SNX4O95219 SNORD50.2-201ENST00000365465 70 ntBASIC-2.13□□□□□ -2.75
SNX4O95219 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.13□□□□□ -2.75
SNX4O95219 snoU13.17-201ENST00000458802 104 ntBASIC-2.13□□□□□ -2.75
SNX4O95219 RNU6-983P-201ENST00000516004 103 ntBASIC-2.13□□□□□ -2.75
SNX4O95219 RNU6-732P-201ENST00000516033 103 ntBASIC-2.13□□□□□ -2.75
SNX4O95219 AC044792.1-201ENST00000593294 196 ntBASIC-2.13□□□□□ -2.75
SNX4O95219 RNU6-774P-201ENST00000363238 107 ntBASIC-2.14□□□□□ -2.75
SNX4O95219 RNU6-1014P-201ENST00000383940 103 ntBASIC-2.14□□□□□ -2.75
SNX4O95219 CYP3A54P-201ENST00000566950 75 ntBASIC-2.14□□□□□ -2.75
SNX4O95219 MIR4441-201ENST00000582623 100 ntBASIC-2.14□□□□□ -2.75
SNX4O95219 MIR5683-201ENST00000636514 76 ntBASIC-2.14□□□□□ -2.75
SNX4O95219 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.15□□□□□ -2.75
SNX4O95219 SNORD115-27-201ENST00000364430 82 ntBASIC-2.15□□□□□ -2.75
SNX4O95219 Y_RNA.344-201ENST00000365381 112 ntBASIC-2.15□□□□□ -2.75
SNX4O95219 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.15□□□□□ -2.75
SNX4O95219 MIR548F4-201ENST00000408515 105 ntBASIC-2.15□□□□□ -2.75
SNX4O95219 MTCYBP6-201ENST00000441810 138 ntBASIC-2.15□□□□□ -2.75
SNX4O95219 MIR4490-201ENST00000582647 84 ntBASIC-2.15□□□□□ -2.75
SNX4O95219 RNY4P6-201ENST00000363667 96 ntBASIC-2.16□□□□□ -2.76
SNX4O95219 Y_RNA.163-201ENST00000363702 113 ntBASIC-2.16□□□□□ -2.76
SNX4O95219 SNORA15B-2-201ENST00000384058 135 ntBASIC-2.16□□□□□ -2.76
SNX4O95219 SNORA15B-1-201ENST00000384334 135 ntBASIC-2.16□□□□□ -2.76
SNX4O95219 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.16□□□□□ -2.76
SNX4O95219 RNU6-400P-201ENST00000391173 106 ntBASIC-2.16□□□□□ -2.76
SNX4O95219 RNA5SP272-201ENST00000516095 111 ntBASIC-2.16□□□□□ -2.76
SNX4O95219 U4.2-201ENST00000618561 85 ntBASIC-2.16□□□□□ -2.76
SNX4O95219 RNU6-228P-201ENST00000362700 106 ntBASIC-2.17□□□□□ -2.76
SNX4O95219 RNU6-158P-201ENST00000517104 100 ntBASIC-2.17□□□□□ -2.76
SNX4O95219 Y_RNA.61-201ENST00000362835 102 ntBASIC-2.18□□□□□ -2.76
SNX4O95219 Y_RNA.188-201ENST00000363952 111 ntBASIC-2.18□□□□□ -2.76
SNX4O95219 Y_RNA.200-201ENST00000364018 102 ntBASIC-2.18□□□□□ -2.76
SNX4O95219 RNU6-260P-201ENST00000384092 107 ntBASIC-2.18□□□□□ -2.76
SNX4O95219 MIR548U-201ENST00000390728 81 ntBASIC-2.18□□□□□ -2.76
SNX4O95219 RNU6-816P-201ENST00000390914 107 ntBASIC-2.18□□□□□ -2.76
SNX4O95219 RNU6-1268P-201ENST00000391214 107 ntBASIC-2.18□□□□□ -2.76
SNX4O95219 RNU6-1239P-201ENST00000391310 107 ntBASIC-2.18□□□□□ -2.76
SNX4O95219 RNA5SP147-201ENST00000516493 109 ntBASIC-2.18□□□□□ -2.76
SNX4O95219 MIR3064-201ENST00000581130 66 ntBASIC-2.18□□□□□ -2.76
SNX4O95219 Y_RNA.149-201ENST00000363558 117 ntBASIC-2.19□□□□□ -2.76
SNX4O95219 RNU6-915P-201ENST00000364943 103 ntBASIC-2.19□□□□□ -2.76
SNX4O95219 SNORD114-3-201ENST00000364969 75 ntBASIC-2.19□□□□□ -2.76
SNX4O95219 RNU7-154P-201ENST00000516194 62 ntBASIC-2.19□□□□□ -2.76
SNX4O95219 AC108019.1-201ENST00000512540 175 ntBASIC-2.2□□□□□ -2.76
SNX4O95219 RNU6-79P-201ENST00000362511 107 ntBASIC-2.21□□□□□ -2.76
SNX4O95219 Y_RNA.47-201ENST00000362697 108 ntBASIC-2.21□□□□□ -2.76
SNX4O95219 Y_RNA.350-201ENST00000365409 98 ntBASIC-2.21□□□□□ -2.76
SNX4O95219 MIR519A2-201ENST00000384990 87 ntBASIC-2.21□□□□□ -2.76
SNX4O95219 AC018880.2-201ENST00000414265 201 ntBASIC-2.21□□□□□ -2.76
SNX4O95219 RNU7-88P-201ENST00000458752 63 ntBASIC-2.21□□□□□ -2.76
SNX4O95219 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.22□□□□□ -2.76
SNX4O95219 RNU6-382P-201ENST00000365181 106 ntBASIC-2.22□□□□□ -2.76
SNX4O95219 RNU6-1051P-201ENST00000365471 102 ntBASIC-2.22□□□□□ -2.76
SNX4O95219 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.22□□□□□ -2.76
SNX4O95219 SNORD90-201ENST00000391145 111 ntBASIC-2.22□□□□□ -2.76
SNX4O95219 MIR548AG1-201ENST00000579932 66 ntBASIC-2.22□□□□□ -2.76
SNX4O95219 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.23□□□□□ -2.77
SNX4O95219 RNU4-11P-201ENST00000365287 132 ntBASIC-2.23□□□□□ -2.77
SNX4O95219 RNU6-460P-201ENST00000391158 108 ntBASIC-2.23□□□□□ -2.77
SNX4O95219 U7.5-201ENST00000517224 61 ntBASIC-2.23□□□□□ -2.77
SNX4O95219 AL117187.1-201ENST00000555482 181 ntBASIC-2.23□□□□□ -2.77
SNX4O95219 AL513043.2-201ENST00000573941 143 ntBASIC-2.23□□□□□ -2.77
SNX4O95219 AC104996.3-201ENST00000590718 94 ntBASIC-2.23□□□□□ -2.77
SNX4O95219 AC072026.1-201ENST00000605023 201 ntBASIC-2.23□□□□□ -2.77
SNX4O95219 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.24□□□□□ -2.77
SNX4O95219 RNU6-246P-201ENST00000384702 107 ntBASIC-2.24□□□□□ -2.77
SNX4O95219 RNU6-1135P-201ENST00000411083 103 ntBASIC-2.24□□□□□ -2.77
SNX4O95219 RNU7-197P-201ENST00000458836 62 ntBASIC-2.24□□□□□ -2.77
SNX4O95219 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.25□□□□□ -2.77
SNX4O95219 RNU6-1039P-201ENST00000383931 107 ntBASIC-2.25□□□□□ -2.77
SNX4O95219 MIR203A-201ENST00000384836 110 ntBASIC-2.25□□□□□ -2.77
SNX4O95219 RNU6-151P-201ENST00000364158 107 ntBASIC-2.26□□□□□ -2.77
SNX4O95219 SNORA19.1-201ENST00000410656 129 ntBASIC-2.26□□□□□ -2.77
SNX4O95219 AC022559.1-201ENST00000520905 205 ntBASIC-2.26□□□□□ -2.77
SNX4O95219 MIR4756-201ENST00000577874 78 ntBASIC-2.26□□□□□ -2.77
SNX4O95219 MIR3657-201ENST00000584818 117 ntBASIC-2.26□□□□□ -2.77
SNX4O95219 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.27□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 208 ms