Protein–RNA interactions for Protein: O43186

CRX, Cone-rod homeobox protein, humanhuman

Predicted RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRXO43186 RNU6-228P-201ENST00000362700 106 ntBASIC-1.7□□□□□ -2.68
CRXO43186 RNY4P27-201ENST00000363341 96 ntBASIC-1.7□□□□□ -2.68
CRXO43186 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.7□□□□□ -2.68
CRXO43186 SNORA24B-201ENST00000384176 131 ntBASIC-1.7□□□□□ -2.68
CRXO43186 RNU6-880P-201ENST00000384526 107 ntBASIC-1.7□□□□□ -2.68
CRXO43186 RNU2-38P-201ENST00000410856 79 ntBASIC-1.7□□□□□ -2.68
CRXO43186 AC108019.1-201ENST00000512540 175 ntBASIC-1.7□□□□□ -2.68
CRXO43186 MIR664B-201ENST00000626756 61 ntBASIC-1.7□□□□□ -2.68
CRXO43186 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.71□□□□□ -2.68
CRXO43186 SNORA33.1-201ENST00000364957 130 ntBASIC-1.71□□□□□ -2.68
CRXO43186 SNORD114-3-201ENST00000364969 75 ntBASIC-1.71□□□□□ -2.68
CRXO43186 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.71□□□□□ -2.68
CRXO43186 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.71□□□□□ -2.68
CRXO43186 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.71□□□□□ -2.68
CRXO43186 MIR487B-201ENST00000385021 84 ntBASIC-1.71□□□□□ -2.68
CRXO43186 snoU13.17-201ENST00000458802 104 ntBASIC-1.71□□□□□ -2.68
CRXO43186 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.71□□□□□ -2.68
CRXO43186 CYP3A54P-201ENST00000566950 75 ntBASIC-1.71□□□□□ -2.68
CRXO43186 MIR3064-201ENST00000581130 66 ntBASIC-1.71□□□□□ -2.68
CRXO43186 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.72□□□□□ -2.68
CRXO43186 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.72□□□□□ -2.68
CRXO43186 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.72□□□□□ -2.68
CRXO43186 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.72□□□□□ -2.68
CRXO43186 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.72□□□□□ -2.68
CRXO43186 MIR507-201ENST00000385234 94 ntBASIC-1.72□□□□□ -2.68
CRXO43186 RNU6-239P-201ENST00000390990 99 ntBASIC-1.72□□□□□ -2.68
CRXO43186 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.72□□□□□ -2.68
CRXO43186 RNU7-154P-201ENST00000516194 62 ntBASIC-1.72□□□□□ -2.68
CRXO43186 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.72□□□□□ -2.68
CRXO43186 AC130289.1-201ENST00000577321 73 ntBASIC-1.72□□□□□ -2.68
CRXO43186 AC104996.3-201ENST00000590718 94 ntBASIC-1.72□□□□□ -2.68
CRXO43186 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.72□□□□□ -2.68
CRXO43186 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.73□□□□□ -2.69
CRXO43186 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.73□□□□□ -2.69
CRXO43186 RNU6-816P-201ENST00000390914 107 ntBASIC-1.73□□□□□ -2.69
CRXO43186 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.73□□□□□ -2.69
CRXO43186 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.73□□□□□ -2.69
CRXO43186 AC020661.2-201ENST00000560114 134 ntBASIC-1.73□□□□□ -2.69
CRXO43186 MIR4490-201ENST00000582647 84 ntBASIC-1.73□□□□□ -2.69
CRXO43186 SNORD115-22-201ENST00000364456 82 ntBASIC-1.74□□□□□ -2.69
CRXO43186 AL078595.1-201ENST00000404458 226 ntBASIC-1.74□□□□□ -2.69
CRXO43186 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.74□□□□□ -2.69
CRXO43186 RNA5SP147-201ENST00000516493 109 ntBASIC-1.74□□□□□ -2.69
CRXO43186 RNU6-62P-201ENST00000516526 102 ntBASIC-1.74□□□□□ -2.69
CRXO43186 AL513043.2-201ENST00000573941 143 ntBASIC-1.74□□□□□ -2.69
CRXO43186 RNU6-382P-201ENST00000365181 106 ntBASIC-1.75□□□□□ -2.69
CRXO43186 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.75□□□□□ -2.69
CRXO43186 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.75□□□□□ -2.69
CRXO43186 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.75□□□□□ -2.69
CRXO43186 RNU6-400P-201ENST00000391173 106 ntBASIC-1.75□□□□□ -2.69
CRXO43186 MTATP6P29-201ENST00000415057 132 ntBASIC-1.75□□□□□ -2.69
CRXO43186 RNU7-121P-201ENST00000516604 62 ntBASIC-1.75□□□□□ -2.69
CRXO43186 MIR6509-201ENST00000614603 85 ntBASIC-1.75□□□□□ -2.69
CRXO43186 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.76□□□□□ -2.69
CRXO43186 RNU6-80P-201ENST00000384195 107 ntBASIC-1.76□□□□□ -2.69
CRXO43186 MIR203A-201ENST00000384836 110 ntBASIC-1.77□□□□□ -2.69
CRXO43186 SNORD90-201ENST00000391145 111 ntBASIC-1.77□□□□□ -2.69
CRXO43186 RNU6-460P-201ENST00000391158 108 ntBASIC-1.77□□□□□ -2.69
CRXO43186 AC022559.1-201ENST00000520905 205 ntBASIC-1.77□□□□□ -2.69
CRXO43186 MIR4756-201ENST00000577874 78 ntBASIC-1.77□□□□□ -2.69
CRXO43186 MIR4773-1-201ENST00000637203 78 ntBASIC-1.77□□□□□ -2.69
CRXO43186 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.78□□□□□ -2.69
CRXO43186 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.78□□□□□ -2.69
CRXO43186 MIR548S-201ENST00000581352 82 ntBASIC-1.78□□□□□ -2.69
CRXO43186 MIR4439-201ENST00000583746 80 ntBASIC-1.78□□□□□ -2.69
CRXO43186 MIR548Z-201ENST00000584743 97 ntBASIC-1.78□□□□□ -2.69
CRXO43186 MIR3657-201ENST00000584818 117 ntBASIC-1.78□□□□□ -2.69
CRXO43186 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.79□□□□□ -2.7
CRXO43186 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.79□□□□□ -2.7
CRXO43186 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.8□□□□□ -2.7
CRXO43186 RNU5F-1-201ENST00000362507 117 ntBASIC-1.8□□□□□ -2.7
CRXO43186 RNU6-915P-201ENST00000364943 103 ntBASIC-1.8□□□□□ -2.7
CRXO43186 SNORA33.2-201ENST00000365413 134 ntBASIC-1.8□□□□□ -2.7
CRXO43186 MIR521-2-201ENST00000384818 87 ntBASIC-1.8□□□□□ -2.7
CRXO43186 MIR577-201ENST00000385196 96 ntBASIC-1.8□□□□□ -2.7
CRXO43186 RNU6-644P-201ENST00000391155 98 ntBASIC-1.8□□□□□ -2.7
CRXO43186 SNORD58.1-201ENST00000391313 66 ntBASIC-1.8□□□□□ -2.7
CRXO43186 AL691482.2-201ENST00000457453 84 ntBASIC-1.8□□□□□ -2.7
CRXO43186 RNU6-168P-201ENST00000516189 101 ntBASIC-1.8□□□□□ -2.7
CRXO43186 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.8□□□□□ -2.7
CRXO43186 MIR4694-201ENST00000578534 80 ntBASIC-1.8□□□□□ -2.7
CRXO43186 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.8□□□□□ -2.7
CRXO43186 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.81□□□□□ -2.7
CRXO43186 RNY3P14-201ENST00000384309 102 ntBASIC-1.81□□□□□ -2.7
CRXO43186 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.81□□□□□ -2.7
CRXO43186 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.81□□□□□ -2.7
CRXO43186 SNORD4B-201ENST00000459083 72 ntBASIC-1.81□□□□□ -2.7
CRXO43186 RNU6-781P-201ENST00000516377 101 ntBASIC-1.81□□□□□ -2.7
CRXO43186 MIR5683-201ENST00000636514 76 ntBASIC-1.81□□□□□ -2.7
CRXO43186 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.82□□□□□ -2.7
CRXO43186 RNU6-151P-201ENST00000364158 107 ntBASIC-1.82□□□□□ -2.7
CRXO43186 RNU6-119P-201ENST00000364882 107 ntBASIC-1.82□□□□□ -2.7
CRXO43186 RNU6-639P-201ENST00000384074 107 ntBASIC-1.82□□□□□ -2.7
CRXO43186 MIR519A2-201ENST00000384990 87 ntBASIC-1.82□□□□□ -2.7
CRXO43186 RNU6-519P-201ENST00000410590 108 ntBASIC-1.82□□□□□ -2.7
CRXO43186 RNU6-118P-201ENST00000516552 102 ntBASIC-1.82□□□□□ -2.7
CRXO43186 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.83□□□□□ -2.7
CRXO43186 RNU4-11P-201ENST00000365287 132 ntBASIC-1.83□□□□□ -2.7
CRXO43186 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.83□□□□□ -2.7
CRXO43186 RNA5SP292-201ENST00000390974 118 ntBASIC-1.83□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 199.8 ms