Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 SNORD89-201ENST00000390981 114 ntBASIC1.07□□□□□ -2.24
FOXN1O15353 RNA5SP404-201ENST00000517118 132 ntBASIC1.07□□□□□ -2.24
FOXN1O15353 RNA5SP117-201ENST00000365294 118 ntBASIC1.06□□□□□ -2.24
FOXN1O15353 RNU6-939P-201ENST00000384634 107 ntBASIC1.06□□□□□ -2.24
FOXN1O15353 SNORA25.8-201ENST00000364831 128 ntBASIC1.05□□□□□ -2.24
FOXN1O15353 MIR617-201ENST00000385030 97 ntBASIC1.05□□□□□ -2.24
FOXN1O15353 MIR519E-201ENST00000385075 84 ntBASIC1.05□□□□□ -2.24
FOXN1O15353 RNU6-274P-201ENST00000459566 107 ntBASIC1.05□□□□□ -2.24
FOXN1O15353 AC067863.3-201ENST00000624172 122 ntBASIC1.05□□□□□ -2.24
FOXN1O15353 RNU6-895P-201ENST00000384125 103 ntBASIC1.04□□□□□ -2.24
FOXN1O15353 RNU6-604P-201ENST00000390917 100 ntBASIC1.04□□□□□ -2.24
FOXN1O15353 AC244098.3-201ENST00000424803 96 ntBASIC1.04□□□□□ -2.24
FOXN1O15353 RNU6-881P-201ENST00000516813 102 ntBASIC1.04□□□□□ -2.24
FOXN1O15353 NAMPTP3-201ENST00000569273 224 ntBASIC1.04□□□□□ -2.24
FOXN1O15353 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.04□□□□□ -2.24
FOXN1O15353 RNU6-495P-201ENST00000362995 107 ntBASIC1.03□□□□□ -2.24
FOXN1O15353 SNORD75.2-201ENST00000408784 58 ntBASIC1.03□□□□□ -2.24
FOXN1O15353 AL691482.2-201ENST00000457453 84 ntBASIC1.03□□□□□ -2.24
FOXN1O15353 RNU6-1110P-201ENST00000516462 101 ntBASIC1.03□□□□□ -2.24
FOXN1O15353 AC005520.4-201ENST00000604337 90 ntBASIC1.03□□□□□ -2.24
FOXN1O15353 MIR8053-201ENST00000613344 75 ntBASIC1.03□□□□□ -2.24
FOXN1O15353 AC244669.1-204ENST00000621564 178 ntBASIC1.03□□□□□ -2.24
FOXN1O15353 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
FOXN1O15353 SNORD113.1-201ENST00000363280 73 ntBASIC1.02□□□□□ -2.25
FOXN1O15353 SNORD28-201ENST00000384706 75 ntBASIC1.02□□□□□ -2.25
FOXN1O15353 SNORD105-201ENST00000386910 85 ntBASIC1.02□□□□□ -2.25
FOXN1O15353 RNU6-630P-201ENST00000391258 106 ntBASIC1.02□□□□□ -2.25
FOXN1O15353 RNU6-752P-201ENST00000516376 102 ntBASIC1.02□□□□□ -2.25
FOXN1O15353 MIR548O2-201ENST00000616090 70 ntBASIC1.02□□□□□ -2.25
FOXN1O15353 RNU6-54P-201ENST00000365563 107 ntBASIC1.01□□□□□ -2.25
FOXN1O15353 SNORD116-24-201ENST00000384549 92 ntBASIC1.01□□□□□ -2.25
FOXN1O15353 MIR203A-201ENST00000384836 110 ntBASIC1.01□□□□□ -2.25
FOXN1O15353 RNU6ATAC4P-201ENST00000387446 126 ntBASIC1.01□□□□□ -2.25
FOXN1O15353 RNU7-24P-201ENST00000458867 62 ntBASIC1.01□□□□□ -2.25
FOXN1O15353 U7.7-201ENST00000459276 60 ntBASIC1.01□□□□□ -2.25
FOXN1O15353 SNORD124-201ENST00000459577 104 ntBASIC1.01□□□□□ -2.25
FOXN1O15353 RNU6-1216P-201ENST00000362590 107 ntBASIC1□□□□□ -2.25
FOXN1O15353 SNORD18A-201ENST00000363753 72 ntBASIC1□□□□□ -2.25
FOXN1O15353 RNU6-1039P-201ENST00000383931 107 ntBASIC1□□□□□ -2.25
FOXN1O15353 RNU6-471P-201ENST00000383944 106 ntBASIC1□□□□□ -2.25
FOXN1O15353 MIR508-201ENST00000384857 115 ntBASIC1□□□□□ -2.25
FOXN1O15353 MIR216B-201ENST00000390186 82 ntBASIC1□□□□□ -2.25
FOXN1O15353 FABP5P4-201ENST00000437203 171 ntBASIC1□□□□□ -2.25
FOXN1O15353 MIR4639-201ENST00000584938 69 ntBASIC1□□□□□ -2.25
FOXN1O15353 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
FOXN1O15353 RNU6-1187P-201ENST00000364771 110 ntBASIC0.99□□□□□ -2.25
FOXN1O15353 RNU6-1335P-201ENST00000365426 107 ntBASIC0.99□□□□□ -2.25
FOXN1O15353 RNU6V-201ENST00000384105 107 ntBASIC0.99□□□□□ -2.25
FOXN1O15353 Y_RNA.443-201ENST00000384135 111 ntBASIC0.99□□□□□ -2.25
FOXN1O15353 SNORD41.1-201ENST00000391000 69 ntBASIC0.99□□□□□ -2.25
FOXN1O15353 SNORD42B-201ENST00000458893 67 ntBASIC0.99□□□□□ -2.25
FOXN1O15353 RNU6-469P-201ENST00000516253 101 ntBASIC0.99□□□□□ -2.25
FOXN1O15353 MIR3678-201ENST00000578455 94 ntBASIC0.99□□□□□ -2.25
FOXN1O15353 MIR6509-201ENST00000614603 85 ntBASIC0.99□□□□□ -2.25
FOXN1O15353 MIR200A-201ENST00000384875 90 ntBASIC0.98□□□□□ -2.25
FOXN1O15353 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.98□□□□□ -2.25
FOXN1O15353 AC093423.1-201ENST00000440817 142 ntBASIC0.98□□□□□ -2.25
FOXN1O15353 RNU6-982P-201ENST00000516216 102 ntBASIC0.98□□□□□ -2.25
FOXN1O15353 RNU6-135P-201ENST00000516769 101 ntBASIC0.98□□□□□ -2.25
FOXN1O15353 RNA5SP47-201ENST00000517230 109 ntBASIC0.98□□□□□ -2.25
FOXN1O15353 MIR6835-201ENST00000621552 64 ntBASIC0.98□□□□□ -2.25
FOXN1O15353 RNU6-726P-201ENST00000364680 107 ntBASIC0.97□□□□□ -2.25
FOXN1O15353 MIR548L-201ENST00000408303 86 ntBASIC0.97□□□□□ -2.25
FOXN1O15353 MIR3612-201ENST00000579753 87 ntBASIC0.97□□□□□ -2.25
FOXN1O15353 MIR4636-201ENST00000582271 80 ntBASIC0.97□□□□□ -2.25
FOXN1O15353 AC243829.3-201ENST00000622177 108 ntBASIC0.97□□□□□ -2.25
FOXN1O15353 SNORA25.4-201ENST00000363666 124 ntBASIC0.96□□□□□ -2.26
FOXN1O15353 MIR573-201ENST00000384964 99 ntBASIC0.96□□□□□ -2.26
FOXN1O15353 RNU7-74P-201ENST00000459104 62 ntBASIC0.96□□□□□ -2.26
FOXN1O15353 SNORD114-24-201ENST00000365029 72 ntBASIC0.95□□□□□ -2.26
FOXN1O15353 MIR9-2-201ENST00000384838 87 ntBASIC0.95□□□□□ -2.26
FOXN1O15353 MT-TY-201ENST00000387409 66 ntBASIC0.95□□□□□ -2.26
FOXN1O15353 RNA5SP347-201ENST00000362445 119 ntBASIC0.94□□□□□ -2.26
FOXN1O15353 RNU6-260P-201ENST00000384092 107 ntBASIC0.94□□□□□ -2.26
FOXN1O15353 RNU6-269P-201ENST00000391077 97 ntBASIC0.94□□□□□ -2.26
FOXN1O15353 OR2A41P-201ENST00000473586 105 ntBASIC0.94□□□□□ -2.26
FOXN1O15353 MIR4460-201ENST00000577862 86 ntBASIC0.94□□□□□ -2.26
FOXN1O15353 MIR3657-201ENST00000584818 117 ntBASIC0.94□□□□□ -2.26
FOXN1O15353 RNU1-141P-201ENST00000364623 158 ntBASIC0.93□□□□□ -2.26
FOXN1O15353 RNA5SP331-201ENST00000364986 107 ntBASIC0.93□□□□□ -2.26
FOXN1O15353 RNU6-990P-201ENST00000364385 104 ntBASIC0.92□□□□□ -2.26
FOXN1O15353 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.92□□□□□ -2.26
FOXN1O15353 RNU5B-6P-201ENST00000516765 68 ntBASIC0.92□□□□□ -2.26
FOXN1O15353 SNORA40.17-201ENST00000517256 115 ntBASIC0.92□□□□□ -2.26
FOXN1O15353 AC025627.3-201ENST00000582078 182 ntBASIC0.92□□□□□ -2.26
FOXN1O15353 AC073869.9-201ENST00000641610 120 ntBASIC0.92□□□□□ -2.26
FOXN1O15353 SNORD114-2-201ENST00000363953 78 ntBASIC0.91□□□□□ -2.26
FOXN1O15353 RNA5SP484-201ENST00000458857 111 ntBASIC0.91□□□□□ -2.26
FOXN1O15353 RPL39P28-201ENST00000465655 155 ntBASIC0.91□□□□□ -2.26
FOXN1O15353 RNU6-351P-201ENST00000516097 100 ntBASIC0.91□□□□□ -2.26
FOXN1O15353 RNA5SP255-201ENST00000516370 107 ntBASIC0.91□□□□□ -2.26
FOXN1O15353 SCARNA16.5-201ENST00000517114 183 ntBASIC0.91□□□□□ -2.26
FOXN1O15353 MIR6759-201ENST00000638110 65 ntBASIC0.91□□□□□ -2.26
FOXN1O15353 SNORA8.2-201ENST00000384372 139 ntBASIC0.9□□□□□ -2.27
FOXN1O15353 SNORD99-201ENST00000408612 74 ntBASIC0.9□□□□□ -2.27
FOXN1O15353 RNA5SP147-201ENST00000516493 109 ntBASIC0.9□□□□□ -2.27
FOXN1O15353 AC018659.1-201ENST00000551083 169 ntBASIC0.9□□□□□ -2.27
FOXN1O15353 AC011195.1-201ENST00000578177 177 ntBASIC0.9□□□□□ -2.27
FOXN1O15353 MIR4511-201ENST00000582784 87 ntBASIC0.9□□□□□ -2.27
FOXN1O15353 MIR18A-201ENST00000362310 71 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms