Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.92□□□□□ -2.72
TRAV3A0A0B4J244 RNU6-80P-201ENST00000384195 107 ntBASIC-1.92□□□□□ -2.72
TRAV3A0A0B4J244 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.92□□□□□ -2.72
TRAV3A0A0B4J244 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.92□□□□□ -2.72
TRAV3A0A0B4J244 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.92□□□□□ -2.72
TRAV3A0A0B4J244 RNU6-1137P-201ENST00000517073 99 ntBASIC-1.92□□□□□ -2.72
TRAV3A0A0B4J244 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.92□□□□□ -2.72
TRAV3A0A0B4J244 MIR3658-201ENST00000636291 56 ntBASIC-1.92□□□□□ -2.72
TRAV3A0A0B4J244 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.93□□□□□ -2.72
TRAV3A0A0B4J244 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.93□□□□□ -2.72
TRAV3A0A0B4J244 SNORD127-201ENST00000458892 86 ntBASIC-1.93□□□□□ -2.72
TRAV3A0A0B4J244 SNORD4B-201ENST00000459083 72 ntBASIC-1.93□□□□□ -2.72
TRAV3A0A0B4J244 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.94□□□□□ -2.72
TRAV3A0A0B4J244 MIR577-201ENST00000385196 96 ntBASIC-1.94□□□□□ -2.72
TRAV3A0A0B4J244 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.94□□□□□ -2.72
TRAV3A0A0B4J244 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.94□□□□□ -2.72
TRAV3A0A0B4J244 MIR4520-1-201ENST00000582609 70 ntBASIC-1.94□□□□□ -2.72
TRAV3A0A0B4J244 MIR4439-201ENST00000583746 80 ntBASIC-1.94□□□□□ -2.72
TRAV3A0A0B4J244 MIR3657-201ENST00000584818 117 ntBASIC-1.94□□□□□ -2.72
TRAV3A0A0B4J244 AC134503.1-201ENST00000633048 54 ntBASIC-1.94□□□□□ -2.72
TRAV3A0A0B4J244 RNU6-1283P-201ENST00000365314 105 ntBASIC-1.95□□□□□ -2.72
TRAV3A0A0B4J244 MIR521-2-201ENST00000384818 87 ntBASIC-1.95□□□□□ -2.72
TRAV3A0A0B4J244 RNU6-816P-201ENST00000390914 107 ntBASIC-1.95□□□□□ -2.72
TRAV3A0A0B4J244 SNORD37.2-201ENST00000391075 66 ntBASIC-1.95□□□□□ -2.72
TRAV3A0A0B4J244 RNU6-644P-201ENST00000391155 98 ntBASIC-1.95□□□□□ -2.72
TRAV3A0A0B4J244 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.95□□□□□ -2.72
TRAV3A0A0B4J244 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.95□□□□□ -2.72
TRAV3A0A0B4J244 MIR4694-201ENST00000578534 80 ntBASIC-1.95□□□□□ -2.72
TRAV3A0A0B4J244 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.96□□□□□ -2.72
TRAV3A0A0B4J244 MIR519A2-201ENST00000384990 87 ntBASIC-1.96□□□□□ -2.72
TRAV3A0A0B4J244 MIR6874-201ENST00000635894 71 ntBASIC-1.96□□□□□ -2.72
TRAV3A0A0B4J244 MTND4P29-201ENST00000503122 1372 ntBASIC-1.97□□□□□ -2.72
TRAV3A0A0B4J244 RNU6-774P-201ENST00000363238 107 ntBASIC-1.97□□□□□ -2.72
TRAV3A0A0B4J244 RNU6-238P-201ENST00000363313 106 ntBASIC-1.97□□□□□ -2.72
TRAV3A0A0B4J244 MIR496-201ENST00000385226 102 ntBASIC-1.97□□□□□ -2.72
TRAV3A0A0B4J244 MIR507-201ENST00000385234 94 ntBASIC-1.97□□□□□ -2.72
TRAV3A0A0B4J244 RNU7-197P-201ENST00000458836 62 ntBASIC-1.97□□□□□ -2.72
TRAV3A0A0B4J244 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.97□□□□□ -2.72
TRAV3A0A0B4J244 MIR6509-201ENST00000614603 85 ntBASIC-1.97□□□□□ -2.72
TRAV3A0A0B4J244 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.98□□□□□ -2.73
TRAV3A0A0B4J244 MT-TD-201ENST00000387419 68 ntBASIC-1.98□□□□□ -2.73
TRAV3A0A0B4J244 SNORD90-201ENST00000391145 111 ntBASIC-1.98□□□□□ -2.73
TRAV3A0A0B4J244 AL078595.1-201ENST00000404458 226 ntBASIC-1.98□□□□□ -2.73
TRAV3A0A0B4J244 MIR1263-201ENST00000408324 86 ntBASIC-1.98□□□□□ -2.73
TRAV3A0A0B4J244 MTND2P23-201ENST00000422990 651 ntBASIC-1.98□□□□□ -2.73
TRAV3A0A0B4J244 RNA5SP147-201ENST00000516493 109 ntBASIC-1.98□□□□□ -2.73
TRAV3A0A0B4J244 MIR4490-201ENST00000582647 84 ntBASIC-1.98□□□□□ -2.73
TRAV3A0A0B4J244 RNU6-824P-201ENST00000363724 104 ntBASIC-1.99□□□□□ -2.73
TRAV3A0A0B4J244 RNU6-151P-201ENST00000364158 107 ntBASIC-1.99□□□□□ -2.73
TRAV3A0A0B4J244 MTATP6P29-201ENST00000415057 132 ntBASIC-1.99□□□□□ -2.73
TRAV3A0A0B4J244 AP002795.1-201ENST00000534879 84 ntBASIC-1.99□□□□□ -2.73
TRAV3A0A0B4J244 MIR6739-201ENST00000622461 75 ntBASIC-1.99□□□□□ -2.73
TRAV3A0A0B4J244 Y_RNA.145-201ENST00000363527 102 ntBASIC-2□□□□□ -2.73
TRAV3A0A0B4J244 RNA5SP292-201ENST00000390974 118 ntBASIC-2□□□□□ -2.73
TRAV3A0A0B4J244 SNORD19-201ENST00000391191 68 ntBASIC-2□□□□□ -2.73
TRAV3A0A0B4J244 RNU6-1219P-201ENST00000516143 112 ntBASIC-2□□□□□ -2.73
TRAV3A0A0B4J244 MIR5683-201ENST00000636514 76 ntBASIC-2□□□□□ -2.73
TRAV3A0A0B4J244 RNU6-832P-201ENST00000363319 107 ntBASIC-2.01□□□□□ -2.73
TRAV3A0A0B4J244 RNA5SP86-201ENST00000390869 98 ntBASIC-2.01□□□□□ -2.73
TRAV3A0A0B4J244 RNU2-38P-201ENST00000410856 79 ntBASIC-2.01□□□□□ -2.73
TRAV3A0A0B4J244 MTND5P20-201ENST00000448677 143 ntBASIC-2.01□□□□□ -2.73
TRAV3A0A0B4J244 RNU6-168P-201ENST00000516189 101 ntBASIC-2.01□□□□□ -2.73
TRAV3A0A0B4J244 Y_RNA.20-201ENST00000362479 113 ntBASIC-2.02□□□□□ -2.73
TRAV3A0A0B4J244 RNU6-915P-201ENST00000364943 103 ntBASIC-2.02□□□□□ -2.73
TRAV3A0A0B4J244 MIR203A-201ENST00000384836 110 ntBASIC-2.02□□□□□ -2.73
TRAV3A0A0B4J244 SNORA18.5-201ENST00000516616 101 ntBASIC-2.02□□□□□ -2.73
TRAV3A0A0B4J244 MIR548Z-201ENST00000584743 97 ntBASIC-2.02□□□□□ -2.73
TRAV3A0A0B4J244 AL160413.1-201ENST00000622780 310 ntBASIC-2.02□□□□□ -2.73
TRAV3A0A0B4J244 RNY3P2-201ENST00000362918 102 ntBASIC-2.03□□□□□ -2.73
TRAV3A0A0B4J244 RNU6-400P-201ENST00000391173 106 ntBASIC-2.03□□□□□ -2.73
TRAV3A0A0B4J244 AL021921.1-201ENST00000442774 93 ntBASIC-2.03□□□□□ -2.73
TRAV3A0A0B4J244 AC090616.4-201ENST00000448026 115 ntBASIC-2.03□□□□□ -2.73
TRAV3A0A0B4J244 RNU6-1153P-201ENST00000516760 105 ntBASIC-2.03□□□□□ -2.73
TRAV3A0A0B4J244 MIR4773-1-201ENST00000637203 78 ntBASIC-2.03□□□□□ -2.73
TRAV3A0A0B4J244 Y_RNA.216-201ENST00000364205 93 ntBASIC-2.04□□□□□ -2.74
TRAV3A0A0B4J244 MIR548I1-201ENST00000408810 149 ntBASIC-2.04□□□□□ -2.74
TRAV3A0A0B4J244 SNORA19.1-201ENST00000410656 129 ntBASIC-2.04□□□□□ -2.74
TRAV3A0A0B4J244 RNU6-518P-201ENST00000516056 96 ntBASIC-2.04□□□□□ -2.74
TRAV3A0A0B4J244 RNU6-412P-201ENST00000516434 106 ntBASIC-2.04□□□□□ -2.74
TRAV3A0A0B4J244 U6.81-201ENST00000612550 106 ntBASIC-2.04□□□□□ -2.74
TRAV3A0A0B4J244 Y_RNA.190-201ENST00000363964 101 ntBASIC-2.05□□□□□ -2.74
TRAV3A0A0B4J244 Y_RNA.233-201ENST00000364407 101 ntBASIC-2.05□□□□□ -2.74
TRAV3A0A0B4J244 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.05□□□□□ -2.74
TRAV3A0A0B4J244 RNU6-813P-201ENST00000384691 107 ntBASIC-2.05□□□□□ -2.74
TRAV3A0A0B4J244 RNU6-246P-201ENST00000384702 107 ntBASIC-2.05□□□□□ -2.74
TRAV3A0A0B4J244 AL691482.2-201ENST00000457453 84 ntBASIC-2.05□□□□□ -2.74
TRAV3A0A0B4J244 RNU4-71P-201ENST00000516258 113 ntBASIC-2.05□□□□□ -2.74
TRAV3A0A0B4J244 Y_RNA.702-201ENST00000516843 96 ntBASIC-2.05□□□□□ -2.74
TRAV3A0A0B4J244 SNORA81.3-201ENST00000517283 198 ntBASIC-2.05□□□□□ -2.74
TRAV3A0A0B4J244 MIR3171-201ENST00000584270 74 ntBASIC-2.05□□□□□ -2.74
TRAV3A0A0B4J244 AP001340.1-201ENST00000624405 217 ntBASIC-2.05□□□□□ -2.74
TRAV3A0A0B4J244 RNU5F-1-201ENST00000362507 117 ntBASIC-2.06□□□□□ -2.74
TRAV3A0A0B4J244 RNU4-40P-201ENST00000364351 143 ntBASIC-2.06□□□□□ -2.74
TRAV3A0A0B4J244 Y_RNA.396-201ENST00000383949 103 ntBASIC-2.06□□□□□ -2.74
TRAV3A0A0B4J244 MTND3P2-201ENST00000438452 342 ntBASIC-2.06□□□□□ -2.74
TRAV3A0A0B4J244 RNU6-635P-201ENST00000516651 102 ntBASIC-2.06□□□□□ -2.74
TRAV3A0A0B4J244 AC020661.2-201ENST00000560114 134 ntBASIC-2.06□□□□□ -2.74
TRAV3A0A0B4J244 MIR3613-201ENST00000579844 87 ntBASIC-2.06□□□□□ -2.74
TRAV3A0A0B4J244 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-2.06□□□□□ -2.74
TRAV3A0A0B4J244 SNORD115-27-201ENST00000364430 82 ntBASIC-2.07□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 300.8 ms