Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 MIR1255A-201ENST00000408338 113 ntBASIC0.91□□□□□ -2.26
PCDHA2Q9Y5H9 MIR3140-201ENST00000583685 90 ntBASIC0.91□□□□□ -2.26
PCDHA2Q9Y5H9 RNU6-1187P-201ENST00000364771 110 ntBASIC0.9□□□□□ -2.27
PCDHA2Q9Y5H9 RNU6-716P-201ENST00000365621 103 ntBASIC0.9□□□□□ -2.27
PCDHA2Q9Y5H9 Y_RNA.660-201ENST00000516002 120 ntBASIC0.9□□□□□ -2.27
PCDHA2Q9Y5H9 RNU5F-1-201ENST00000362507 117 ntBASIC0.89□□□□□ -2.27
PCDHA2Q9Y5H9 RNU6-478P-201ENST00000363904 110 ntBASIC0.89□□□□□ -2.27
PCDHA2Q9Y5H9 SNORD114-2-201ENST00000363953 78 ntBASIC0.89□□□□□ -2.27
PCDHA2Q9Y5H9 RNY1P8-201ENST00000383970 114 ntBASIC0.89□□□□□ -2.27
PCDHA2Q9Y5H9 SNORA36.2-201ENST00000384004 127 ntBASIC0.89□□□□□ -2.27
PCDHA2Q9Y5H9 RNU6-110P-201ENST00000384508 104 ntBASIC0.89□□□□□ -2.27
PCDHA2Q9Y5H9 MIR140-201ENST00000385282 100 ntBASIC0.89□□□□□ -2.27
PCDHA2Q9Y5H9 MIR216B-201ENST00000390186 82 ntBASIC0.89□□□□□ -2.27
PCDHA2Q9Y5H9 RNA5SP227-201ENST00000516184 113 ntBASIC0.89□□□□□ -2.27
PCDHA2Q9Y5H9 RNA5SP395-201ENST00000516567 118 ntBASIC0.89□□□□□ -2.27
PCDHA2Q9Y5H9 RNA5SP268-201ENST00000516828 124 ntBASIC0.89□□□□□ -2.27
PCDHA2Q9Y5H9 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.89□□□□□ -2.27
PCDHA2Q9Y5H9 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
PCDHA2Q9Y5H9 RNU6-315P-201ENST00000362666 107 ntBASIC0.88□□□□□ -2.27
PCDHA2Q9Y5H9 SNORA24B-201ENST00000384176 131 ntBASIC0.88□□□□□ -2.27
PCDHA2Q9Y5H9 Y_RNA.540-201ENST00000384638 111 ntBASIC0.88□□□□□ -2.27
PCDHA2Q9Y5H9 SNORD77.2-201ENST00000391045 68 ntBASIC0.88□□□□□ -2.27
PCDHA2Q9Y5H9 snoU13.17-201ENST00000458802 104 ntBASIC0.88□□□□□ -2.27
PCDHA2Q9Y5H9 AL162376.1-201ENST00000624117 175 ntBASIC0.88□□□□□ -2.27
PCDHA2Q9Y5H9 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.88□□□□□ -2.27
PCDHA2Q9Y5H9 RNU6-161P-201ENST00000363051 106 ntBASIC0.87□□□□□ -2.27
PCDHA2Q9Y5H9 Y_RNA.94-201ENST00000363068 106 ntBASIC0.87□□□□□ -2.27
PCDHA2Q9Y5H9 Y_RNA.264-201ENST00000364665 102 ntBASIC0.87□□□□□ -2.27
PCDHA2Q9Y5H9 RNU6-1052P-201ENST00000411398 104 ntBASIC0.87□□□□□ -2.27
PCDHA2Q9Y5H9 RNA5SP436-201ENST00000516020 115 ntBASIC0.87□□□□□ -2.27
PCDHA2Q9Y5H9 RNU6-1108P-201ENST00000516308 104 ntBASIC0.87□□□□□ -2.27
PCDHA2Q9Y5H9 RNU6-719P-201ENST00000516671 104 ntBASIC0.87□□□□□ -2.27
PCDHA2Q9Y5H9 MIR4712-201ENST00000583750 82 ntBASIC0.87□□□□□ -2.27
PCDHA2Q9Y5H9 PVT1_3.1-201ENST00000620853 95 ntBASIC0.87□□□□□ -2.27
PCDHA2Q9Y5H9 RNU6-208P-201ENST00000362431 107 ntBASIC0.86□□□□□ -2.27
PCDHA2Q9Y5H9 RNU6-686P-201ENST00000364839 107 ntBASIC0.86□□□□□ -2.27
PCDHA2Q9Y5H9 MIR598-201ENST00000384868 97 ntBASIC0.86□□□□□ -2.27
PCDHA2Q9Y5H9 RNU6-269P-201ENST00000391077 97 ntBASIC0.86□□□□□ -2.27
PCDHA2Q9Y5H9 RNU6-279P-201ENST00000391297 101 ntBASIC0.86□□□□□ -2.27
PCDHA2Q9Y5H9 AC093423.1-201ENST00000440817 142 ntBASIC0.86□□□□□ -2.27
PCDHA2Q9Y5H9 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
PCDHA2Q9Y5H9 MIRLET7A1-201ENST00000362295 80 ntBASIC0.85□□□□□ -2.27
PCDHA2Q9Y5H9 RNA5SP517-201ENST00000364724 117 ntBASIC0.85□□□□□ -2.27
PCDHA2Q9Y5H9 SNORA8.2-201ENST00000384372 139 ntBASIC0.85□□□□□ -2.27
PCDHA2Q9Y5H9 PSMC1P5-201ENST00000512850 177 ntBASIC0.85□□□□□ -2.27
PCDHA2Q9Y5H9 MIR7107-201ENST00000611489 80 ntBASIC0.85□□□□□ -2.27
PCDHA2Q9Y5H9 RNA5SP225-201ENST00000410874 135 ntBASIC0.84□□□□□ -2.27
PCDHA2Q9Y5H9 MIR4714-201ENST00000580728 77 ntBASIC0.84□□□□□ -2.27
PCDHA2Q9Y5H9 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.83□□□□□ -2.28
PCDHA2Q9Y5H9 MIR548O2-201ENST00000616090 70 ntBASIC0.83□□□□□ -2.28
PCDHA2Q9Y5H9 MIR6835-201ENST00000621552 64 ntBASIC0.83□□□□□ -2.28
PCDHA2Q9Y5H9 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
PCDHA2Q9Y5H9 AC097510.1-201ENST00000510945 133 ntBASIC0.82□□□□□ -2.28
PCDHA2Q9Y5H9 AC092634.7-201ENST00000621022 103 ntBASIC0.82□□□□□ -2.28
PCDHA2Q9Y5H9 MIR6866-201ENST00000638146 69 ntBASIC0.82□□□□□ -2.28
PCDHA2Q9Y5H9 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
PCDHA2Q9Y5H9 RNU1-141P-201ENST00000364623 158 ntBASIC0.81□□□□□ -2.28
PCDHA2Q9Y5H9 RNU2-59P-201ENST00000410482 191 ntBASIC0.81□□□□□ -2.28
PCDHA2Q9Y5H9 RNU6-857P-201ENST00000515893 110 ntBASIC0.81□□□□□ -2.28
PCDHA2Q9Y5H9 RNU6-1177P-201ENST00000391058 104 ntBASIC0.8□□□□□ -2.28
PCDHA2Q9Y5H9 YWHAEP2-201ENST00000580066 112 ntBASIC0.8□□□□□ -2.28
PCDHA2Q9Y5H9 YWHAEP3-201ENST00000582767 121 ntBASIC0.8□□□□□ -2.28
PCDHA2Q9Y5H9 AL590095.2-201ENST00000604136 117 ntBASIC0.8□□□□□ -2.28
PCDHA2Q9Y5H9 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
PCDHA2Q9Y5H9 Y_RNA.12-201ENST00000362393 112 ntBASIC0.79□□□□□ -2.28
PCDHA2Q9Y5H9 RNU6-1094P-201ENST00000362416 104 ntBASIC0.79□□□□□ -2.28
PCDHA2Q9Y5H9 RNU6-24P-201ENST00000384440 107 ntBASIC0.79□□□□□ -2.28
PCDHA2Q9Y5H9 RNU6-380P-201ENST00000410207 107 ntBASIC0.79□□□□□ -2.28
PCDHA2Q9Y5H9 AC073869.9-201ENST00000641610 120 ntBASIC0.79□□□□□ -2.28
PCDHA2Q9Y5H9 SNORD118-201ENST00000363593 134 ntBASIC0.78□□□□□ -2.28
PCDHA2Q9Y5H9 MIR508-201ENST00000384857 115 ntBASIC0.78□□□□□ -2.28
PCDHA2Q9Y5H9 MIR146A-201ENST00000385201 99 ntBASIC0.78□□□□□ -2.28
PCDHA2Q9Y5H9 MT-TY-201ENST00000387409 66 ntBASIC0.78□□□□□ -2.28
PCDHA2Q9Y5H9 Y_RNA.606-201ENST00000410579 103 ntBASIC0.78□□□□□ -2.28
PCDHA2Q9Y5H9 SNORA40.8-201ENST00000411034 126 ntBASIC0.78□□□□□ -2.28
PCDHA2Q9Y5H9 RNA5SP484-201ENST00000458857 111 ntBASIC0.78□□□□□ -2.28
PCDHA2Q9Y5H9 MIR4460-201ENST00000577862 86 ntBASIC0.78□□□□□ -2.28
PCDHA2Q9Y5H9 MIR4653-201ENST00000585107 83 ntBASIC0.78□□□□□ -2.28
PCDHA2Q9Y5H9 RNU6-824P-201ENST00000363724 104 ntBASIC0.77□□□□□ -2.29
PCDHA2Q9Y5H9 RNU6-638P-201ENST00000516582 104 ntBASIC0.77□□□□□ -2.29
PCDHA2Q9Y5H9 U6.81-201ENST00000612550 106 ntBASIC0.77□□□□□ -2.29
PCDHA2Q9Y5H9 RNU6-340P-201ENST00000364005 107 ntBASIC0.76□□□□□ -2.29
PCDHA2Q9Y5H9 RNU6-303P-201ENST00000517091 106 ntBASIC0.76□□□□□ -2.29
PCDHA2Q9Y5H9 SNORA25.18-201ENST00000607153 114 ntBASIC0.76□□□□□ -2.29
PCDHA2Q9Y5H9 Y_RNA.258-201ENST00000364613 105 ntBASIC0.75□□□□□ -2.29
PCDHA2Q9Y5H9 MIR518A1-201ENST00000385068 85 ntBASIC0.75□□□□□ -2.29
PCDHA2Q9Y5H9 NAMPTP3-201ENST00000569273 224 ntBASIC0.75□□□□□ -2.29
PCDHA2Q9Y5H9 AC069503.3-201ENST00000618674 145 ntBASIC0.75□□□□□ -2.29
PCDHA2Q9Y5H9 MIR6513-201ENST00000621188 64 ntBASIC0.75□□□□□ -2.29
PCDHA2Q9Y5H9 Y_RNA.371-201ENST00000365591 113 ntBASIC0.74□□□□□ -2.29
PCDHA2Q9Y5H9 RNU6V-201ENST00000384105 107 ntBASIC0.74□□□□□ -2.29
PCDHA2Q9Y5H9 Y_RNA.532-201ENST00000384590 113 ntBASIC0.74□□□□□ -2.29
PCDHA2Q9Y5H9 SNORD71-201ENST00000411292 86 ntBASIC0.74□□□□□ -2.29
PCDHA2Q9Y5H9 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.74□□□□□ -2.29
PCDHA2Q9Y5H9 RNA5SP480-201ENST00000516840 109 ntBASIC0.74□□□□□ -2.29
PCDHA2Q9Y5H9 MIR1297-201ENST00000637311 77 ntBASIC0.74□□□□□ -2.29
PCDHA2Q9Y5H9 RNU6-495P-201ENST00000362995 107 ntBASIC0.73□□□□□ -2.29
PCDHA2Q9Y5H9 RNU6-681P-201ENST00000364012 104 ntBASIC0.73□□□□□ -2.29
PCDHA2Q9Y5H9 AC074348.1-201ENST00000426503 132 ntBASIC0.73□□□□□ -2.29
PCDHA2Q9Y5H9 AC069271.1-201ENST00000445577 156 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 7.4 ms