Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
PCDHB1Q9Y5F3 RNU6-161P-201ENST00000363051 106 ntBASIC0.81□□□□□ -2.28
PCDHB1Q9Y5F3 Y_RNA.94-201ENST00000363068 106 ntBASIC0.81□□□□□ -2.28
PCDHB1Q9Y5F3 RNU6-716P-201ENST00000365621 103 ntBASIC0.81□□□□□ -2.28
PCDHB1Q9Y5F3 FGF7P7-201ENST00000514120 227 ntBASIC0.81□□□□□ -2.28
PCDHB1Q9Y5F3 RNA5SP47-201ENST00000517230 109 ntBASIC0.81□□□□□ -2.28
PCDHB1Q9Y5F3 MIR4639-201ENST00000584938 69 ntBASIC0.81□□□□□ -2.28
PCDHB1Q9Y5F3 MIR4653-201ENST00000585107 83 ntBASIC0.81□□□□□ -2.28
PCDHB1Q9Y5F3 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.81□□□□□ -2.28
PCDHB1Q9Y5F3 Y_RNA.30-201ENST00000362572 97 ntBASIC0.8□□□□□ -2.28
PCDHB1Q9Y5F3 SNORA36.1-201ENST00000363424 132 ntBASIC0.8□□□□□ -2.28
PCDHB1Q9Y5F3 RNU6-1229P-201ENST00000364295 107 ntBASIC0.8□□□□□ -2.28
PCDHB1Q9Y5F3 RNU6-1051P-201ENST00000365471 102 ntBASIC0.8□□□□□ -2.28
PCDHB1Q9Y5F3 SNORA36.2-201ENST00000384004 127 ntBASIC0.8□□□□□ -2.28
PCDHB1Q9Y5F3 MIR451A-201ENST00000385059 72 ntBASIC0.8□□□□□ -2.28
PCDHB1Q9Y5F3 MIR2113-201ENST00000459007 91 ntBASIC0.8□□□□□ -2.28
PCDHB1Q9Y5F3 RNA5SP395-201ENST00000516567 118 ntBASIC0.8□□□□□ -2.28
PCDHB1Q9Y5F3 MIR4712-201ENST00000583750 82 ntBASIC0.8□□□□□ -2.28
PCDHB1Q9Y5F3 SNORA63.2-201ENST00000362603 126 ntBASIC0.79□□□□□ -2.28
PCDHB1Q9Y5F3 RNU6-624P-201ENST00000363411 107 ntBASIC0.79□□□□□ -2.28
PCDHB1Q9Y5F3 RNU6-1126P-201ENST00000384002 107 ntBASIC0.79□□□□□ -2.28
PCDHB1Q9Y5F3 RNU6-935P-201ENST00000410371 100 ntBASIC0.79□□□□□ -2.28
PCDHB1Q9Y5F3 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.79□□□□□ -2.28
PCDHB1Q9Y5F3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.79□□□□□ -2.28
PCDHB1Q9Y5F3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
PCDHB1Q9Y5F3 MIR193B-201ENST00000384907 83 ntBASIC0.78□□□□□ -2.28
PCDHB1Q9Y5F3 MIR6513-201ENST00000621188 64 ntBASIC0.78□□□□□ -2.28
PCDHB1Q9Y5F3 AC067863.3-201ENST00000624172 122 ntBASIC0.78□□□□□ -2.28
PCDHB1Q9Y5F3 MIR140-201ENST00000385282 100 ntBASIC0.77□□□□□ -2.29
PCDHB1Q9Y5F3 RNU6-129P-201ENST00000391022 107 ntBASIC0.77□□□□□ -2.29
PCDHB1Q9Y5F3 RNU6-857P-201ENST00000515893 110 ntBASIC0.77□□□□□ -2.29
PCDHB1Q9Y5F3 Y_RNA.685-201ENST00000516532 108 ntBASIC0.77□□□□□ -2.29
PCDHB1Q9Y5F3 MIR6866-201ENST00000638146 69 ntBASIC0.77□□□□□ -2.29
PCDHB1Q9Y5F3 RNU6-726P-201ENST00000364680 107 ntBASIC0.76□□□□□ -2.29
PCDHB1Q9Y5F3 MIR508-201ENST00000384857 115 ntBASIC0.76□□□□□ -2.29
PCDHB1Q9Y5F3 MIR519E-201ENST00000385075 84 ntBASIC0.76□□□□□ -2.29
PCDHB1Q9Y5F3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.76□□□□□ -2.29
PCDHB1Q9Y5F3 RNA5SP94-201ENST00000516917 108 ntBASIC0.76□□□□□ -2.29
PCDHB1Q9Y5F3 SNORA24B-201ENST00000384176 131 ntBASIC0.75□□□□□ -2.29
PCDHB1Q9Y5F3 Y_RNA.532-201ENST00000384590 113 ntBASIC0.75□□□□□ -2.29
PCDHB1Q9Y5F3 RNU6-279P-201ENST00000391297 101 ntBASIC0.75□□□□□ -2.29
PCDHB1Q9Y5F3 MIR548L-201ENST00000408303 86 ntBASIC0.75□□□□□ -2.29
PCDHB1Q9Y5F3 SCARNA16.5-201ENST00000517114 183 ntBASIC0.75□□□□□ -2.29
PCDHB1Q9Y5F3 MIR1273G-201ENST00000577677 100 ntBASIC0.75□□□□□ -2.29
PCDHB1Q9Y5F3 AL590095.2-201ENST00000604136 117 ntBASIC0.75□□□□□ -2.29
PCDHB1Q9Y5F3 MIR6835-201ENST00000621552 64 ntBASIC0.75□□□□□ -2.29
PCDHB1Q9Y5F3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
PCDHB1Q9Y5F3 SNORD115-44-201ENST00000365391 82 ntBASIC0.74□□□□□ -2.29
PCDHB1Q9Y5F3 MIR146A-201ENST00000385201 99 ntBASIC0.74□□□□□ -2.29
PCDHB1Q9Y5F3 SNORD41.1-201ENST00000391000 69 ntBASIC0.74□□□□□ -2.29
PCDHB1Q9Y5F3 MIR936-201ENST00000401264 98 ntBASIC0.74□□□□□ -2.29
PCDHB1Q9Y5F3 RNU6-208P-201ENST00000362431 107 ntBASIC0.73□□□□□ -2.29
PCDHB1Q9Y5F3 RNU6-269P-201ENST00000391077 97 ntBASIC0.73□□□□□ -2.29
PCDHB1Q9Y5F3 MIR7107-201ENST00000611489 80 ntBASIC0.73□□□□□ -2.29
PCDHB1Q9Y5F3 Y_RNA.788-201ENST00000622394 112 ntBASIC0.73□□□□□ -2.29
PCDHB1Q9Y5F3 MIRLET7A1-201ENST00000362295 80 ntBASIC0.72□□□□□ -2.29
PCDHB1Q9Y5F3 Y_RNA.244-201ENST00000364484 109 ntBASIC0.72□□□□□ -2.29
PCDHB1Q9Y5F3 Y_RNA.258-201ENST00000364613 105 ntBASIC0.72□□□□□ -2.29
PCDHB1Q9Y5F3 MIR617-201ENST00000385030 97 ntBASIC0.72□□□□□ -2.29
PCDHB1Q9Y5F3 SNORD77.2-201ENST00000391045 68 ntBASIC0.72□□□□□ -2.29
PCDHB1Q9Y5F3 MIR889-201ENST00000401280 79 ntBASIC0.72□□□□□ -2.29
PCDHB1Q9Y5F3 RNA5SP227-201ENST00000516184 113 ntBASIC0.72□□□□□ -2.29
PCDHB1Q9Y5F3 RNU6-638P-201ENST00000516582 104 ntBASIC0.72□□□□□ -2.29
PCDHB1Q9Y5F3 RNA5SP268-201ENST00000516828 124 ntBASIC0.72□□□□□ -2.29
PCDHB1Q9Y5F3 RNU6-1057P-201ENST00000517162 102 ntBASIC0.72□□□□□ -2.29
PCDHB1Q9Y5F3 MIR4484-201ENST00000582855 83 ntBASIC0.72□□□□□ -2.29
PCDHB1Q9Y5F3 MIR6828-201ENST00000636181 60 ntBASIC0.72□□□□□ -2.29
PCDHB1Q9Y5F3 SNORD114-23-201ENST00000363536 72 ntBASIC0.71□□□□□ -2.3
PCDHB1Q9Y5F3 RNU6-824P-201ENST00000363724 104 ntBASIC0.71□□□□□ -2.3
PCDHB1Q9Y5F3 RNA5SP517-201ENST00000364724 117 ntBASIC0.71□□□□□ -2.3
PCDHB1Q9Y5F3 MIR4752-201ENST00000579672 72 ntBASIC0.71□□□□□ -2.3
PCDHB1Q9Y5F3 SNORA25.18-201ENST00000607153 114 ntBASIC0.71□□□□□ -2.3
PCDHB1Q9Y5F3 AC092634.7-201ENST00000621022 103 ntBASIC0.71□□□□□ -2.3
PCDHB1Q9Y5F3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.7□□□□□ -2.3
PCDHB1Q9Y5F3 RNU5F-1-201ENST00000362507 117 ntBASIC0.7□□□□□ -2.3
PCDHB1Q9Y5F3 RNU6-686P-201ENST00000364839 107 ntBASIC0.7□□□□□ -2.3
PCDHB1Q9Y5F3 Y_RNA.371-201ENST00000365591 113 ntBASIC0.7□□□□□ -2.3
PCDHB1Q9Y5F3 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
PCDHB1Q9Y5F3 RNA5SP484-201ENST00000458857 111 ntBASIC0.7□□□□□ -2.3
PCDHB1Q9Y5F3 RNU6-557P-201ENST00000516842 110 ntBASIC0.7□□□□□ -2.3
PCDHB1Q9Y5F3 AC018659.1-201ENST00000551083 169 ntBASIC0.7□□□□□ -2.3
PCDHB1Q9Y5F3 RNU6-315P-201ENST00000362666 107 ntBASIC0.69□□□□□ -2.3
PCDHB1Q9Y5F3 RNU6-54P-201ENST00000365563 107 ntBASIC0.69□□□□□ -2.3
PCDHB1Q9Y5F3 SNORA8.2-201ENST00000384372 139 ntBASIC0.69□□□□□ -2.3
PCDHB1Q9Y5F3 AC093423.1-201ENST00000440817 142 ntBASIC0.69□□□□□ -2.3
PCDHB1Q9Y5F3 SCARNA18B-201ENST00000458806 135 ntBASIC0.69□□□□□ -2.3
PCDHB1Q9Y5F3 Y_RNA.12-201ENST00000362393 112 ntBASIC0.68□□□□□ -2.3
PCDHB1Q9Y5F3 Y_RNA.115-201ENST00000363272 98 ntBASIC0.68□□□□□ -2.3
PCDHB1Q9Y5F3 RNA5SP193-201ENST00000410353 107 ntBASIC0.68□□□□□ -2.3
PCDHB1Q9Y5F3 AL162376.1-201ENST00000624117 175 ntBASIC0.68□□□□□ -2.3
PCDHB1Q9Y5F3 RNU6-330P-201ENST00000363015 107 ntBASIC0.67□□□□□ -2.3
PCDHB1Q9Y5F3 RNY4P3-201ENST00000365254 95 ntBASIC0.67□□□□□ -2.3
PCDHB1Q9Y5F3 RNU6-24P-201ENST00000384440 107 ntBASIC0.67□□□□□ -2.3
PCDHB1Q9Y5F3 SNORD71-201ENST00000411292 86 ntBASIC0.67□□□□□ -2.3
PCDHB1Q9Y5F3 RNU4-54P-201ENST00000516428 129 ntBASIC0.67□□□□□ -2.3
PCDHB1Q9Y5F3 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.67□□□□□ -2.3
PCDHB1Q9Y5F3 RNU6V-201ENST00000384105 107 ntBASIC0.66□□□□□ -2.3
PCDHB1Q9Y5F3 RNU6-1177P-201ENST00000391058 104 ntBASIC0.66□□□□□ -2.3
PCDHB1Q9Y5F3 SNORA40.8-201ENST00000411034 126 ntBASIC0.66□□□□□ -2.3
PCDHB1Q9Y5F3 AC069271.1-201ENST00000445577 156 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 205.5 ms