Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 SNORA67.1-201ENST00000364749 141 ntBASIC2.45□□□□□ -2.02
TRIM35Q9UPQ4 RNA5SP182-201ENST00000516064 82 ntBASIC2.45□□□□□ -2.02
TRIM35Q9UPQ4 7SK.11-201ENST00000615477 250 ntBASIC2.45□□□□□ -2.02
TRIM35Q9UPQ4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
TRIM35Q9UPQ4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
TRIM35Q9UPQ4 MIR764-201ENST00000390811 85 ntBASIC2.44□□□□□ -2.02
TRIM35Q9UPQ4 MIR6895-201ENST00000613497 78 ntBASIC2.44□□□□□ -2.02
TRIM35Q9UPQ4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.44□□□□□ -2.02
TRIM35Q9UPQ4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.44□□□□□ -2.02
TRIM35Q9UPQ4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
TRIM35Q9UPQ4 SNORA80D-201ENST00000384488 135 ntBASIC2.43□□□□□ -2.02
TRIM35Q9UPQ4 RNU6-724P-201ENST00000390958 105 ntBASIC2.43□□□□□ -2.02
TRIM35Q9UPQ4 MIR934-201ENST00000401241 83 ntBASIC2.43□□□□□ -2.02
TRIM35Q9UPQ4 AL021921.1-201ENST00000442774 93 ntBASIC2.43□□□□□ -2.02
TRIM35Q9UPQ4 RNU7-90P-201ENST00000459216 62 ntBASIC2.43□□□□□ -2.02
TRIM35Q9UPQ4 AC002350.1-201ENST00000490759 375 ntBASIC2.43□□□□□ -2.02
TRIM35Q9UPQ4 SCARNA17.3-201ENST00000516381 125 ntBASIC2.43□□□□□ -2.02
TRIM35Q9UPQ4 RNA5SP82-201ENST00000516707 92 ntBASIC2.43□□□□□ -2.02
TRIM35Q9UPQ4 RMST_2.1-201ENST00000617263 136 ntBASIC2.43□□□□□ -2.02
TRIM35Q9UPQ4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.43□□□□□ -2.02
TRIM35Q9UPQ4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.43□□□□□ -2.02
TRIM35Q9UPQ4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
TRIM35Q9UPQ4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
TRIM35Q9UPQ4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TRIM35Q9UPQ4 SNORA8.2-201ENST00000384372 139 ntBASIC2.42□□□□□ -2.02
TRIM35Q9UPQ4 RNU6-469P-201ENST00000516253 101 ntBASIC2.42□□□□□ -2.02
TRIM35Q9UPQ4 RN7SKP88-201ENST00000516847 250 ntBASIC2.42□□□□□ -2.02
TRIM35Q9UPQ4 7SK.8-201ENST00000612110 250 ntBASIC2.42□□□□□ -2.02
TRIM35Q9UPQ4 7SK.13-201ENST00000622040 250 ntBASIC2.42□□□□□ -2.02
TRIM35Q9UPQ4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TRIM35Q9UPQ4 MIR1827-201ENST00000408549 66 ntBASIC2.41□□□□□ -2.02
TRIM35Q9UPQ4 AC079804.2-201ENST00000490376 200 ntBASIC2.41□□□□□ -2.02
TRIM35Q9UPQ4 CYP3A54P-201ENST00000566950 75 ntBASIC2.41□□□□□ -2.02
TRIM35Q9UPQ4 MIR4287-201ENST00000579398 78 ntBASIC2.41□□□□□ -2.02
TRIM35Q9UPQ4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
TRIM35Q9UPQ4 Y_RNA.282-201ENST00000364793 102 ntBASIC2.4□□□□□ -2.03
TRIM35Q9UPQ4 MIR527-201ENST00000385244 85 ntBASIC2.4□□□□□ -2.03
TRIM35Q9UPQ4 RNU6-295P-201ENST00000516901 104 ntBASIC2.4□□□□□ -2.03
TRIM35Q9UPQ4 RNU6-419P-201ENST00000517030 63 ntBASIC2.4□□□□□ -2.03
TRIM35Q9UPQ4 AC015712.3-201ENST00000559380 164 ntBASIC2.4□□□□□ -2.03
TRIM35Q9UPQ4 RNU6-269P-201ENST00000391077 97 ntBASIC2.39□□□□□ -2.03
TRIM35Q9UPQ4 RNA5SP484-201ENST00000458857 111 ntBASIC2.39□□□□□ -2.03
TRIM35Q9UPQ4 SNORA44.1-201ENST00000517031 108 ntBASIC2.39□□□□□ -2.03
TRIM35Q9UPQ4 MIR30A-201ENST00000385092 71 ntBASIC2.38□□□□□ -2.03
TRIM35Q9UPQ4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
TRIM35Q9UPQ4 RNU6-518P-201ENST00000516056 96 ntBASIC2.38□□□□□ -2.03
TRIM35Q9UPQ4 RNU6-716P-201ENST00000365621 103 ntBASIC2.37□□□□□ -2.03
TRIM35Q9UPQ4 MIR652-201ENST00000385278 98 ntBASIC2.37□□□□□ -2.03
TRIM35Q9UPQ4 SNORA26.9-201ENST00000391322 122 ntBASIC2.37□□□□□ -2.03
TRIM35Q9UPQ4 Y_RNA.407-201ENST00000383986 113 ntBASIC2.36□□□□□ -2.03
TRIM35Q9UPQ4 RNU6-246P-201ENST00000384702 107 ntBASIC2.36□□□□□ -2.03
TRIM35Q9UPQ4 MIR583-201ENST00000384846 75 ntBASIC2.36□□□□□ -2.03
TRIM35Q9UPQ4 MIR524-201ENST00000385242 87 ntBASIC2.36□□□□□ -2.03
TRIM35Q9UPQ4 MIR548E-201ENST00000408287 88 ntBASIC2.36□□□□□ -2.03
TRIM35Q9UPQ4 RNA5SP489-201ENST00000410986 109 ntBASIC2.36□□□□□ -2.03
TRIM35Q9UPQ4 RNU6-172P-201ENST00000411000 93 ntBASIC2.36□□□□□ -2.03
TRIM35Q9UPQ4 RNA5SP47-201ENST00000517230 109 ntBASIC2.36□□□□□ -2.03
TRIM35Q9UPQ4 MIR5694-201ENST00000581190 76 ntBASIC2.36□□□□□ -2.03
TRIM35Q9UPQ4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
TRIM35Q9UPQ4 SNORA16.1-201ENST00000364597 132 ntBASIC2.35□□□□□ -2.03
TRIM35Q9UPQ4 MIR582-201ENST00000365731 98 ntBASIC2.35□□□□□ -2.03
TRIM35Q9UPQ4 MIR504-201ENST00000385065 83 ntBASIC2.35□□□□□ -2.03
TRIM35Q9UPQ4 AL591806.2-201ENST00000433122 173 ntBASIC2.35□□□□□ -2.03
TRIM35Q9UPQ4 RNU6-237P-201ENST00000515985 71 ntBASIC2.35□□□□□ -2.03
TRIM35Q9UPQ4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.35□□□□□ -2.03
TRIM35Q9UPQ4 U6.96-201ENST00000636425 70 ntBASIC2.35□□□□□ -2.03
TRIM35Q9UPQ4 SNORD1B-201ENST00000363091 84 ntBASIC2.34□□□□□ -2.03
TRIM35Q9UPQ4 RNU6-910P-201ENST00000390844 107 ntBASIC2.34□□□□□ -2.03
TRIM35Q9UPQ4 SNORD79.1-201ENST00000516069 84 ntBASIC2.34□□□□□ -2.03
TRIM35Q9UPQ4 MIR4299-201ENST00000577899 72 ntBASIC2.34□□□□□ -2.03
TRIM35Q9UPQ4 MIR4490-201ENST00000582647 84 ntBASIC2.34□□□□□ -2.03
TRIM35Q9UPQ4 MIR7843-201ENST00000622274 79 ntBASIC2.34□□□□□ -2.03
TRIM35Q9UPQ4 SNORD18A-201ENST00000363753 72 ntBASIC2.33□□□□□ -2.04
TRIM35Q9UPQ4 SNORD48-201ENST00000364953 64 ntBASIC2.33□□□□□ -2.04
TRIM35Q9UPQ4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.32□□□□□ -2.04
TRIM35Q9UPQ4 MIR4419B-201ENST00000577260 68 ntBASIC2.32□□□□□ -2.04
TRIM35Q9UPQ4 MIR8081-201ENST00000611533 95 ntBASIC2.32□□□□□ -2.04
TRIM35Q9UPQ4 AC084768.2-201ENST00000622736 221 ntBASIC2.32□□□□□ -2.04
TRIM35Q9UPQ4 RNU6-696P-201ENST00000390834 107 ntBASIC2.31□□□□□ -2.04
TRIM35Q9UPQ4 HMGN2P19-201ENST00000425149 265 ntBASIC2.3□□□□□ -2.04
TRIM35Q9UPQ4 MIR4255-201ENST00000579351 72 ntBASIC2.3□□□□□ -2.04
TRIM35Q9UPQ4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC2.3□□□□□ -2.04
TRIM35Q9UPQ4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRIM35Q9UPQ4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.29□□□□□ -2.04
TRIM35Q9UPQ4 snoU13.23-201ENST00000458863 104 ntBASIC2.29□□□□□ -2.04
TRIM35Q9UPQ4 MIR4781-201ENST00000585250 76 ntBASIC2.29□□□□□ -2.04
TRIM35Q9UPQ4 RNU6-986P-201ENST00000363133 102 ntBASIC2.28□□□□□ -2.04
TRIM35Q9UPQ4 MIR519A2-201ENST00000384990 87 ntBASIC2.28□□□□□ -2.04
TRIM35Q9UPQ4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TRIM35Q9UPQ4 RNU4-52P-201ENST00000384209 138 ntBASIC2.27□□□□□ -2.05
TRIM35Q9UPQ4 MIR516B1-201ENST00000385211 90 ntBASIC2.27□□□□□ -2.05
TRIM35Q9UPQ4 MIR548AE1-201ENST00000583292 70 ntBASIC2.27□□□□□ -2.05
TRIM35Q9UPQ4 AC090617.8-201ENST00000623339 167 ntBASIC2.27□□□□□ -2.05
TRIM35Q9UPQ4 AL162376.1-201ENST00000624117 175 ntBASIC2.27□□□□□ -2.05
TRIM35Q9UPQ4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.26□□□□□ -2.05
TRIM35Q9UPQ4 RNU6-924P-201ENST00000362926 108 ntBASIC2.25□□□□□ -2.05
TRIM35Q9UPQ4 MIR1255B2-201ENST00000408618 67 ntBASIC2.25□□□□□ -2.05
TRIM35Q9UPQ4 SCARNA16.5-201ENST00000517114 183 ntBASIC2.25□□□□□ -2.05
TRIM35Q9UPQ4 AC243829.3-201ENST00000622177 108 ntBASIC2.25□□□□□ -2.05
TRIM35Q9UPQ4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 338.7 ms