Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.44□□□□□ -2.34
USP35Q9P2H5 RNU6-287P-201ENST00000516230 98 ntBASIC0.44□□□□□ -2.34
USP35Q9P2H5 MTRNR2L2-201ENST00000604882 87 ntBASIC0.44□□□□□ -2.34
USP35Q9P2H5 RNU6-132P-201ENST00000383863 107 ntBASIC0.43□□□□□ -2.34
USP35Q9P2H5 RNU6-269P-201ENST00000391077 97 ntBASIC0.43□□□□□ -2.34
USP35Q9P2H5 RNU7-13P-201ENST00000516413 62 ntBASIC0.43□□□□□ -2.34
USP35Q9P2H5 MIR4696-201ENST00000581431 70 ntBASIC0.43□□□□□ -2.34
USP35Q9P2H5 RNU1-29P-201ENST00000606574 126 ntBASIC0.43□□□□□ -2.34
USP35Q9P2H5 MIR2052-201ENST00000636055 55 ntBASIC0.43□□□□□ -2.34
USP35Q9P2H5 MIRLET7F1-201ENST00000362202 87 ntBASIC0.42□□□□□ -2.34
USP35Q9P2H5 Y_RNA.207-201ENST00000364142 106 ntBASIC0.42□□□□□ -2.34
USP35Q9P2H5 RNY4P3-201ENST00000365254 95 ntBASIC0.42□□□□□ -2.34
USP35Q9P2H5 RNU6-466P-201ENST00000391224 103 ntBASIC0.42□□□□□ -2.34
USP35Q9P2H5 Y_RNA.609-201ENST00000410669 89 ntBASIC0.42□□□□□ -2.34
USP35Q9P2H5 MIR4536-1-201ENST00000583537 88 ntBASIC0.42□□□□□ -2.34
USP35Q9P2H5 AL162376.1-201ENST00000624117 175 ntBASIC0.42□□□□□ -2.34
USP35Q9P2H5 RNU6-664P-201ENST00000362381 107 ntBASIC0.41□□□□□ -2.34
USP35Q9P2H5 Y_RNA.96-201ENST00000363092 109 ntBASIC0.41□□□□□ -2.34
USP35Q9P2H5 SNORD116-10-201ENST00000363791 102 ntBASIC0.41□□□□□ -2.34
USP35Q9P2H5 RNU6-49P-201ENST00000384256 107 ntBASIC0.41□□□□□ -2.34
USP35Q9P2H5 Y_RNA.596-201ENST00000410462 109 ntBASIC0.41□□□□□ -2.34
USP35Q9P2H5 SNORA2A-201ENST00000383885 135 ntBASIC0.4□□□□□ -2.35
USP35Q9P2H5 MIR519E-201ENST00000385075 84 ntBASIC0.4□□□□□ -2.35
USP35Q9P2H5 RNA5SP299-201ENST00000391203 116 ntBASIC0.4□□□□□ -2.35
USP35Q9P2H5 RNU6-519P-201ENST00000410590 108 ntBASIC0.4□□□□□ -2.35
USP35Q9P2H5 RNU6-65P-201ENST00000516332 98 ntBASIC0.4□□□□□ -2.35
USP35Q9P2H5 MIR6755-201ENST00000619993 66 ntBASIC0.4□□□□□ -2.35
USP35Q9P2H5 RNU6-1131P-201ENST00000364955 107 ntBASIC0.39□□□□□ -2.35
USP35Q9P2H5 SNORD101-201ENST00000384027 73 ntBASIC0.39□□□□□ -2.35
USP35Q9P2H5 RNA5SP292-201ENST00000390974 118 ntBASIC0.39□□□□□ -2.35
USP35Q9P2H5 MIR2113-201ENST00000459007 91 ntBASIC0.39□□□□□ -2.35
USP35Q9P2H5 RNU6-1232P-201ENST00000516299 86 ntBASIC0.39□□□□□ -2.35
USP35Q9P2H5 SNORA70.25-201ENST00000612741 95 ntBASIC0.39□□□□□ -2.35
USP35Q9P2H5 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.39□□□□□ -2.35
USP35Q9P2H5 RNU6-1298P-201ENST00000362456 101 ntBASIC0.38□□□□□ -2.35
USP35Q9P2H5 RNA5SP98-201ENST00000363158 137 ntBASIC0.38□□□□□ -2.35
USP35Q9P2H5 SNORD115-44-201ENST00000365391 82 ntBASIC0.38□□□□□ -2.35
USP35Q9P2H5 MIR617-201ENST00000385030 97 ntBASIC0.38□□□□□ -2.35
USP35Q9P2H5 RNY4P30-201ENST00000410216 95 ntBASIC0.38□□□□□ -2.35
USP35Q9P2H5 AC093423.1-201ENST00000440817 142 ntBASIC0.38□□□□□ -2.35
USP35Q9P2H5 MIR4802-201ENST00000581881 80 ntBASIC0.38□□□□□ -2.35
USP35Q9P2H5 Y_RNA.185-201ENST00000363894 100 ntBASIC0.37□□□□□ -2.35
USP35Q9P2H5 Y_RNA.423-201ENST00000384057 113 ntBASIC0.37□□□□□ -2.35
USP35Q9P2H5 SNORD90-201ENST00000391145 111 ntBASIC0.37□□□□□ -2.35
USP35Q9P2H5 RNA5SP484-201ENST00000458857 111 ntBASIC0.37□□□□□ -2.35
USP35Q9P2H5 RNU7-74P-201ENST00000459104 62 ntBASIC0.37□□□□□ -2.35
USP35Q9P2H5 MIR3064-201ENST00000581130 66 ntBASIC0.37□□□□□ -2.35
USP35Q9P2H5 SNORD115-27-201ENST00000364430 82 ntBASIC0.36□□□□□ -2.35
USP35Q9P2H5 AC073261.1-201ENST00000429409 121 ntBASIC0.36□□□□□ -2.35
USP35Q9P2H5 RNU6-267P-201ENST00000516714 103 ntBASIC0.36□□□□□ -2.35
USP35Q9P2H5 AC069113.3-201ENST00000521019 150 ntBASIC0.36□□□□□ -2.35
USP35Q9P2H5 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.36□□□□□ -2.35
USP35Q9P2H5 MIR4315-1-201ENST00000636800 73 ntBASIC0.36□□□□□ -2.35
USP35Q9P2H5 MIR4315-2-201ENST00000640925 73 ntBASIC0.36□□□□□ -2.35
USP35Q9P2H5 RNU4-32P-201ENST00000363404 141 ntBASIC0.35□□□□□ -2.35
USP35Q9P2H5 Z95118.1-201ENST00000421372 247 ntBASIC0.35□□□□□ -2.35
USP35Q9P2H5 NAMPTP3-201ENST00000569273 224 ntBASIC0.35□□□□□ -2.35
USP35Q9P2H5 AC104996.3-201ENST00000590718 94 ntBASIC0.35□□□□□ -2.35
USP35Q9P2H5 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.35□□□□□ -2.35
USP35Q9P2H5 Y_RNA.239-201ENST00000364444 113 ntBASIC0.34□□□□□ -2.36
USP35Q9P2H5 RNU1-141P-201ENST00000364623 158 ntBASIC0.34□□□□□ -2.36
USP35Q9P2H5 RNU6-811P-201ENST00000384069 107 ntBASIC0.34□□□□□ -2.36
USP35Q9P2H5 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
USP35Q9P2H5 RNU7-153P-201ENST00000516455 62 ntBASIC0.34□□□□□ -2.36
USP35Q9P2H5 SNORA18.5-201ENST00000516616 101 ntBASIC0.34□□□□□ -2.36
USP35Q9P2H5 RNU6-844P-201ENST00000517175 102 ntBASIC0.34□□□□□ -2.36
USP35Q9P2H5 AC073869.9-201ENST00000641610 120 ntBASIC0.34□□□□□ -2.36
USP35Q9P2H5 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.33□□□□□ -2.36
USP35Q9P2H5 Y_RNA.220-201ENST00000364244 109 ntBASIC0.33□□□□□ -2.36
USP35Q9P2H5 RNU6-219P-201ENST00000364728 107 ntBASIC0.33□□□□□ -2.36
USP35Q9P2H5 RNU6-935P-201ENST00000410371 100 ntBASIC0.33□□□□□ -2.36
USP35Q9P2H5 RNU6-402P-201ENST00000410678 103 ntBASIC0.33□□□□□ -2.36
USP35Q9P2H5 RNU6-1052P-201ENST00000411398 104 ntBASIC0.33□□□□□ -2.36
USP35Q9P2H5 RNU6-719P-201ENST00000516671 104 ntBASIC0.33□□□□□ -2.36
USP35Q9P2H5 MIR5582-201ENST00000579697 68 ntBASIC0.33□□□□□ -2.36
USP35Q9P2H5 MIR4668-201ENST00000582284 70 ntBASIC0.33□□□□□ -2.36
USP35Q9P2H5 MIR3140-201ENST00000583685 90 ntBASIC0.33□□□□□ -2.36
USP35Q9P2H5 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.33□□□□□ -2.36
USP35Q9P2H5 SNORA9.1-201ENST00000362412 131 ntBASIC0.32□□□□□ -2.36
USP35Q9P2H5 RNU6-815P-201ENST00000384080 113 ntBASIC0.32□□□□□ -2.36
USP35Q9P2H5 Y_RNA.491-201ENST00000384417 107 ntBASIC0.32□□□□□ -2.36
USP35Q9P2H5 Y_RNA.620-201ENST00000411009 88 ntBASIC0.32□□□□□ -2.36
USP35Q9P2H5 Y_RNA.694-201ENST00000516677 117 ntBASIC0.32□□□□□ -2.36
USP35Q9P2H5 MIR5190-201ENST00000581537 80 ntBASIC0.32□□□□□ -2.36
USP35Q9P2H5 MIR5093-201ENST00000583199 100 ntBASIC0.32□□□□□ -2.36
USP35Q9P2H5 U7.6-201ENST00000610841 64 ntBASIC0.32□□□□□ -2.36
USP35Q9P2H5 RNU6-509P-201ENST00000363519 107 ntBASIC0.31□□□□□ -2.36
USP35Q9P2H5 MIR451A-201ENST00000385059 72 ntBASIC0.31□□□□□ -2.36
USP35Q9P2H5 MIR5706-201ENST00000579841 80 ntBASIC0.31□□□□□ -2.36
USP35Q9P2H5 RNU6-633P-201ENST00000362612 103 ntBASIC0.3□□□□□ -2.36
USP35Q9P2H5 RNU6-497P-201ENST00000365316 104 ntBASIC0.3□□□□□ -2.36
USP35Q9P2H5 SNORD116-22-201ENST00000384430 92 ntBASIC0.3□□□□□ -2.36
USP35Q9P2H5 MIR548U-201ENST00000390728 81 ntBASIC0.3□□□□□ -2.36
USP35Q9P2H5 SNORD110-201ENST00000408189 75 ntBASIC0.3□□□□□ -2.36
USP35Q9P2H5 RNA5SP25-201ENST00000410815 110 ntBASIC0.3□□□□□ -2.36
USP35Q9P2H5 HMGN2P22-201ENST00000427588 175 ntBASIC0.3□□□□□ -2.36
USP35Q9P2H5 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.29□□□□□ -2.36
USP35Q9P2H5 Y_RNA.17-201ENST00000362433 111 ntBASIC0.29□□□□□ -2.36
USP35Q9P2H5 RNA5SP368-201ENST00000364298 116 ntBASIC0.29□□□□□ -2.36
USP35Q9P2H5 MIR760-201ENST00000390220 80 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 377 ms