Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 RNY1P11-201ENST00000363759 113 ntBASIC-1.53□□□□□ -2.65
VAPAQ9P0L0 AL078595.1-201ENST00000404458 226 ntBASIC-1.53□□□□□ -2.65
VAPAQ9P0L0 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.54□□□□□ -2.66
VAPAQ9P0L0 RNU6-132P-201ENST00000383863 107 ntBASIC-1.54□□□□□ -2.66
VAPAQ9P0L0 MIR4770-201ENST00000579149 58 ntBASIC-1.54□□□□□ -2.66
VAPAQ9P0L0 MIR548S-201ENST00000581352 82 ntBASIC-1.54□□□□□ -2.66
VAPAQ9P0L0 MIR3163-201ENST00000581592 73 ntBASIC-1.54□□□□□ -2.66
VAPAQ9P0L0 MIR198-201ENST00000637333 62 ntBASIC-1.54□□□□□ -2.66
VAPAQ9P0L0 SNORD38.1-201ENST00000363863 68 ntBASIC-1.55□□□□□ -2.66
VAPAQ9P0L0 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.55□□□□□ -2.66
VAPAQ9P0L0 RNU6-164P-201ENST00000364604 103 ntBASIC-1.55□□□□□ -2.66
VAPAQ9P0L0 MIR203A-201ENST00000384836 110 ntBASIC-1.55□□□□□ -2.66
VAPAQ9P0L0 MIR759-201ENST00000390224 91 ntBASIC-1.55□□□□□ -2.66
VAPAQ9P0L0 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.55□□□□□ -2.66
VAPAQ9P0L0 MIR3171-201ENST00000584270 74 ntBASIC-1.55□□□□□ -2.66
VAPAQ9P0L0 MIR8062-201ENST00000621515 85 ntBASIC-1.55□□□□□ -2.66
VAPAQ9P0L0 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.55□□□□□ -2.66
VAPAQ9P0L0 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.56□□□□□ -2.66
VAPAQ9P0L0 RNU6-238P-201ENST00000363313 106 ntBASIC-1.56□□□□□ -2.66
VAPAQ9P0L0 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.56□□□□□ -2.66
VAPAQ9P0L0 RNA5SP331-201ENST00000364986 107 ntBASIC-1.56□□□□□ -2.66
VAPAQ9P0L0 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.56□□□□□ -2.66
VAPAQ9P0L0 snoU13.17-201ENST00000458802 104 ntBASIC-1.56□□□□□ -2.66
VAPAQ9P0L0 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.56□□□□□ -2.66
VAPAQ9P0L0 RNU6-635P-201ENST00000516651 102 ntBASIC-1.56□□□□□ -2.66
VAPAQ9P0L0 CYP3A54P-201ENST00000566950 75 ntBASIC-1.56□□□□□ -2.66
VAPAQ9P0L0 AC025521.1-201ENST00000621624 286 ntBASIC-1.56□□□□□ -2.66
VAPAQ9P0L0 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.57□□□□□ -2.66
VAPAQ9P0L0 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.57□□□□□ -2.66
VAPAQ9P0L0 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.57□□□□□ -2.66
VAPAQ9P0L0 AL353691.2-201ENST00000443795 59 ntBASIC-1.57□□□□□ -2.66
VAPAQ9P0L0 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.57□□□□□ -2.66
VAPAQ9P0L0 RNU7-85P-201ENST00000458851 63 ntBASIC-1.57□□□□□ -2.66
VAPAQ9P0L0 MIR3646-201ENST00000578301 84 ntBASIC-1.57□□□□□ -2.66
VAPAQ9P0L0 MIR4536-1-201ENST00000583537 88 ntBASIC-1.57□□□□□ -2.66
VAPAQ9P0L0 SNORA63.2-201ENST00000362603 126 ntBASIC-1.58□□□□□ -2.66
VAPAQ9P0L0 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.58□□□□□ -2.66
VAPAQ9P0L0 SNORA24B-201ENST00000384176 131 ntBASIC-1.58□□□□□ -2.66
VAPAQ9P0L0 RNU6-80P-201ENST00000384195 107 ntBASIC-1.58□□□□□ -2.66
VAPAQ9P0L0 MIR548A1-201ENST00000385041 97 ntBASIC-1.58□□□□□ -2.66
VAPAQ9P0L0 SNORD90-201ENST00000391145 111 ntBASIC-1.58□□□□□ -2.66
VAPAQ9P0L0 SNORD19-201ENST00000391191 68 ntBASIC-1.58□□□□□ -2.66
VAPAQ9P0L0 RNU7-88P-201ENST00000458752 63 ntBASIC-1.58□□□□□ -2.66
VAPAQ9P0L0 RNU6-65P-201ENST00000516332 98 ntBASIC-1.58□□□□□ -2.66
VAPAQ9P0L0 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.59□□□□□ -2.66
VAPAQ9P0L0 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.59□□□□□ -2.66
VAPAQ9P0L0 SNORD75.2-201ENST00000408784 58 ntBASIC-1.59□□□□□ -2.66
VAPAQ9P0L0 SNORD127-201ENST00000458892 86 ntBASIC-1.59□□□□□ -2.66
VAPAQ9P0L0 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.59□□□□□ -2.66
VAPAQ9P0L0 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.59□□□□□ -2.66
VAPAQ9P0L0 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.59□□□□□ -2.66
VAPAQ9P0L0 SNORD37.2-201ENST00000391075 66 ntBASIC-1.6□□□□□ -2.67
VAPAQ9P0L0 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.6□□□□□ -2.67
VAPAQ9P0L0 SNX3P1X-201ENST00000414887 175 ntBASIC-1.6□□□□□ -2.67
VAPAQ9P0L0 AC090616.4-201ENST00000448026 115 ntBASIC-1.6□□□□□ -2.67
VAPAQ9P0L0 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.61□□□□□ -2.67
VAPAQ9P0L0 RNU6-382P-201ENST00000365181 106 ntBASIC-1.61□□□□□ -2.67
VAPAQ9P0L0 RNU6-260P-201ENST00000384092 107 ntBASIC-1.61□□□□□ -2.67
VAPAQ9P0L0 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.61□□□□□ -2.67
VAPAQ9P0L0 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.61□□□□□ -2.67
VAPAQ9P0L0 MIR519A2-201ENST00000384990 87 ntBASIC-1.61□□□□□ -2.67
VAPAQ9P0L0 RNA5SP86-201ENST00000390869 98 ntBASIC-1.61□□□□□ -2.67
VAPAQ9P0L0 MIR548AG1-201ENST00000579932 66 ntBASIC-1.61□□□□□ -2.67
VAPAQ9P0L0 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.61□□□□□ -2.67
VAPAQ9P0L0 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.62□□□□□ -2.67
VAPAQ9P0L0 MIR548H1-201ENST00000408610 102 ntBASIC-1.62□□□□□ -2.67
VAPAQ9P0L0 MTND2P23-201ENST00000422990 651 ntBASIC-1.62□□□□□ -2.67
VAPAQ9P0L0 RNU6-732P-201ENST00000516033 103 ntBASIC-1.62□□□□□ -2.67
VAPAQ9P0L0 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.62□□□□□ -2.67
VAPAQ9P0L0 MIR5683-201ENST00000636514 76 ntBASIC-1.62□□□□□ -2.67
VAPAQ9P0L0 RNU6-151P-201ENST00000364158 107 ntBASIC-1.63□□□□□ -2.67
VAPAQ9P0L0 SNORD50.2-201ENST00000365465 70 ntBASIC-1.63□□□□□ -2.67
VAPAQ9P0L0 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.63□□□□□ -2.67
VAPAQ9P0L0 AC020661.2-201ENST00000560114 134 ntBASIC-1.63□□□□□ -2.67
VAPAQ9P0L0 RNU6-363P-201ENST00000362895 105 ntBASIC-1.64□□□□□ -2.67
VAPAQ9P0L0 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.64□□□□□ -2.67
VAPAQ9P0L0 MIR487B-201ENST00000385021 84 ntBASIC-1.64□□□□□ -2.67
VAPAQ9P0L0 RNU7-24P-201ENST00000458867 62 ntBASIC-1.64□□□□□ -2.67
VAPAQ9P0L0 RNU6-168P-201ENST00000516189 101 ntBASIC-1.64□□□□□ -2.67
VAPAQ9P0L0 U7.5-201ENST00000517224 61 ntBASIC-1.64□□□□□ -2.67
VAPAQ9P0L0 MIR3064-201ENST00000581130 66 ntBASIC-1.64□□□□□ -2.67
VAPAQ9P0L0 AL442128.1-201ENST00000615151 90 ntBASIC-1.64□□□□□ -2.67
VAPAQ9P0L0 RNU6-774P-201ENST00000363238 107 ntBASIC-1.65□□□□□ -2.67
VAPAQ9P0L0 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.65□□□□□ -2.67
VAPAQ9P0L0 RNU6-704P-201ENST00000364162 103 ntBASIC-1.65□□□□□ -2.67
VAPAQ9P0L0 RNU6-312P-201ENST00000364629 107 ntBASIC-1.65□□□□□ -2.67
VAPAQ9P0L0 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.65□□□□□ -2.67
VAPAQ9P0L0 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.65□□□□□ -2.67
VAPAQ9P0L0 RNU6-639P-201ENST00000384074 107 ntBASIC-1.65□□□□□ -2.67
VAPAQ9P0L0 RNY3P14-201ENST00000384309 102 ntBASIC-1.65□□□□□ -2.67
VAPAQ9P0L0 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.65□□□□□ -2.67
VAPAQ9P0L0 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.65□□□□□ -2.67
VAPAQ9P0L0 SNORA19.1-201ENST00000410656 129 ntBASIC-1.65□□□□□ -2.67
VAPAQ9P0L0 RNU2-38P-201ENST00000410856 79 ntBASIC-1.65□□□□□ -2.67
VAPAQ9P0L0 MTATP8P1-201ENST00000467115 207 ntBASIC-1.65□□□□□ -2.67
VAPAQ9P0L0 MIR1246-201ENST00000636535 73 ntBASIC-1.65□□□□□ -2.67
VAPAQ9P0L0 MIR4773-1-201ENST00000637203 78 ntBASIC-1.65□□□□□ -2.67
VAPAQ9P0L0 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.66□□□□□ -2.68
VAPAQ9P0L0 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.66□□□□□ -2.68
VAPAQ9P0L0 MIR601-201ENST00000385256 79 ntBASIC-1.66□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms