Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 SNORD116-18-201ENST00000383961 92 ntBASIC-0.53□□□□□ -2.49
ZCCHC3Q9NUD5 RNU6-935P-201ENST00000410371 100 ntBASIC-0.53□□□□□ -2.49
ZCCHC3Q9NUD5 MIR1912-201ENST00000410389 80 ntBASIC-0.53□□□□□ -2.49
ZCCHC3Q9NUD5 RNU6-394P-201ENST00000410735 107 ntBASIC-0.53□□□□□ -2.49
ZCCHC3Q9NUD5 RNU4-63P-201ENST00000411313 118 ntBASIC-0.53□□□□□ -2.49
ZCCHC3Q9NUD5 uc_338.19-201ENST00000616808 99 ntBASIC-0.53□□□□□ -2.49
ZCCHC3Q9NUD5 AC090617.8-201ENST00000623339 167 ntBASIC-0.53□□□□□ -2.49
ZCCHC3Q9NUD5 AC099654.10-201ENST00000640395 161 ntBASIC-0.53□□□□□ -2.49
ZCCHC3Q9NUD5 AL512310.12-203ENST00000640543 90 ntBASIC-0.53□□□□□ -2.49
ZCCHC3Q9NUD5 SNORD38.1-201ENST00000363863 68 ntBASIC-0.54□□□□□ -2.5
ZCCHC3Q9NUD5 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.54□□□□□ -2.5
ZCCHC3Q9NUD5 MIR224-201ENST00000384889 81 ntBASIC-0.54□□□□□ -2.5
ZCCHC3Q9NUD5 MIR451A-201ENST00000385059 72 ntBASIC-0.54□□□□□ -2.5
ZCCHC3Q9NUD5 MIR548G-201ENST00000408442 89 ntBASIC-0.54□□□□□ -2.5
ZCCHC3Q9NUD5 MIR4464-201ENST00000580818 92 ntBASIC-0.54□□□□□ -2.5
ZCCHC3Q9NUD5 RNU6-90P-201ENST00000606352 106 ntBASIC-0.54□□□□□ -2.5
ZCCHC3Q9NUD5 RNU6-990P-201ENST00000364385 104 ntBASIC-0.55□□□□□ -2.5
ZCCHC3Q9NUD5 SNORD74.6-201ENST00000364796 70 ntBASIC-0.55□□□□□ -2.5
ZCCHC3Q9NUD5 RNU6-466P-201ENST00000391224 103 ntBASIC-0.55□□□□□ -2.5
ZCCHC3Q9NUD5 Z95118.1-201ENST00000421372 247 ntBASIC-0.55□□□□□ -2.5
ZCCHC3Q9NUD5 AL158147.1-201ENST00000443970 75 ntBASIC-0.55□□□□□ -2.5
ZCCHC3Q9NUD5 SNORD2-201ENST00000459163 69 ntBASIC-0.55□□□□□ -2.5
ZCCHC3Q9NUD5 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.55□□□□□ -2.5
ZCCHC3Q9NUD5 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.55□□□□□ -2.5
ZCCHC3Q9NUD5 AC140658.3-201ENST00000567603 271 ntBASIC-0.55□□□□□ -2.5
ZCCHC3Q9NUD5 MIR548X2-201ENST00000579776 100 ntBASIC-0.55□□□□□ -2.5
ZCCHC3Q9NUD5 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.56□□□□□ -2.5
ZCCHC3Q9NUD5 MIR124-2-201ENST00000385081 109 ntBASIC-0.56□□□□□ -2.5
ZCCHC3Q9NUD5 MT-TQ-201ENST00000387372 72 ntBASIC-0.56□□□□□ -2.5
ZCCHC3Q9NUD5 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.56□□□□□ -2.5
ZCCHC3Q9NUD5 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.56□□□□□ -2.5
ZCCHC3Q9NUD5 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.56□□□□□ -2.5
ZCCHC3Q9NUD5 RNA5SP470-201ENST00000516463 106 ntBASIC-0.56□□□□□ -2.5
ZCCHC3Q9NUD5 RNU6-719P-201ENST00000516671 104 ntBASIC-0.56□□□□□ -2.5
ZCCHC3Q9NUD5 MIR378F-201ENST00000578143 78 ntBASIC-0.56□□□□□ -2.5
ZCCHC3Q9NUD5 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.57□□□□□ -2.5
ZCCHC3Q9NUD5 SNORD114-17-201ENST00000364699 75 ntBASIC-0.57□□□□□ -2.5
ZCCHC3Q9NUD5 SNORA63.6-201ENST00000364921 119 ntBASIC-0.57□□□□□ -2.5
ZCCHC3Q9NUD5 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.57□□□□□ -2.5
ZCCHC3Q9NUD5 MIR216B-201ENST00000390186 82 ntBASIC-0.57□□□□□ -2.5
ZCCHC3Q9NUD5 RNU7-134P-201ENST00000458997 64 ntBASIC-0.57□□□□□ -2.5
ZCCHC3Q9NUD5 RNU6-274P-201ENST00000459566 107 ntBASIC-0.57□□□□□ -2.5
ZCCHC3Q9NUD5 SNORD18.2-201ENST00000459604 70 ntBASIC-0.57□□□□□ -2.5
ZCCHC3Q9NUD5 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.57□□□□□ -2.5
ZCCHC3Q9NUD5 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.57□□□□□ -2.5
ZCCHC3Q9NUD5 U7.2-201ENST00000607576 63 ntBASIC-0.57□□□□□ -2.5
ZCCHC3Q9NUD5 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.57□□□□□ -2.5
ZCCHC3Q9NUD5 AC025521.1-201ENST00000621624 286 ntBASIC-0.57□□□□□ -2.5
ZCCHC3Q9NUD5 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.58□□□□□ -2.5
ZCCHC3Q9NUD5 RNU6-132P-201ENST00000383863 107 ntBASIC-0.58□□□□□ -2.5
ZCCHC3Q9NUD5 SNORA24B-201ENST00000384176 131 ntBASIC-0.58□□□□□ -2.5
ZCCHC3Q9NUD5 RNU7-85P-201ENST00000458851 63 ntBASIC-0.58□□□□□ -2.5
ZCCHC3Q9NUD5 FGF7P7-201ENST00000514120 227 ntBASIC-0.58□□□□□ -2.5
ZCCHC3Q9NUD5 RNU6-781P-201ENST00000516377 101 ntBASIC-0.58□□□□□ -2.5
ZCCHC3Q9NUD5 AC068339.1-201ENST00000526965 141 ntBASIC-0.58□□□□□ -2.5
ZCCHC3Q9NUD5 MIR3140-201ENST00000583685 90 ntBASIC-0.58□□□□□ -2.5
ZCCHC3Q9NUD5 MIR6888-201ENST00000621977 67 ntBASIC-0.58□□□□□ -2.5
ZCCHC3Q9NUD5 snoR1.1-201ENST00000628177 80 ntBASIC-0.58□□□□□ -2.5
ZCCHC3Q9NUD5 RNU6-495P-201ENST00000362995 107 ntBASIC-0.59□□□□□ -2.5
ZCCHC3Q9NUD5 SNORD114-4-201ENST00000363962 75 ntBASIC-0.59□□□□□ -2.5
ZCCHC3Q9NUD5 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.59□□□□□ -2.5
ZCCHC3Q9NUD5 RNU6-409P-201ENST00000384114 104 ntBASIC-0.59□□□□□ -2.5
ZCCHC3Q9NUD5 U3.27-201ENST00000391237 200 ntBASIC-0.59□□□□□ -2.5
ZCCHC3Q9NUD5 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.59□□□□□ -2.5
ZCCHC3Q9NUD5 YWHAEP3-201ENST00000582767 121 ntBASIC-0.59□□□□□ -2.5
ZCCHC3Q9NUD5 AL445584.3-201ENST00000617173 78 ntBASIC-0.59□□□□□ -2.5
ZCCHC3Q9NUD5 RNU6-208P-201ENST00000362431 107 ntBASIC-0.6□□□□□ -2.51
ZCCHC3Q9NUD5 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.6□□□□□ -2.51
ZCCHC3Q9NUD5 RNU6-804P-201ENST00000384286 107 ntBASIC-0.6□□□□□ -2.51
ZCCHC3Q9NUD5 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.6□□□□□ -2.51
ZCCHC3Q9NUD5 MIR604-201ENST00000384880 94 ntBASIC-0.6□□□□□ -2.51
ZCCHC3Q9NUD5 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.6□□□□□ -2.51
ZCCHC3Q9NUD5 SNORD90-201ENST00000391145 111 ntBASIC-0.6□□□□□ -2.51
ZCCHC3Q9NUD5 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.6□□□□□ -2.51
ZCCHC3Q9NUD5 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.6□□□□□ -2.51
ZCCHC3Q9NUD5 MIR3144-201ENST00000579460 79 ntBASIC-0.6□□□□□ -2.51
ZCCHC3Q9NUD5 AL353803.5-201ENST00000599815 141 ntBASIC-0.6□□□□□ -2.51
ZCCHC3Q9NUD5 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.6□□□□□ -2.51
ZCCHC3Q9NUD5 AL442128.1-201ENST00000615151 90 ntBASIC-0.6□□□□□ -2.51
ZCCHC3Q9NUD5 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.61□□□□□ -2.51
ZCCHC3Q9NUD5 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.61□□□□□ -2.51
ZCCHC3Q9NUD5 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.61□□□□□ -2.51
ZCCHC3Q9NUD5 SNORD50.2-201ENST00000365465 70 ntBASIC-0.61□□□□□ -2.51
ZCCHC3Q9NUD5 RNU6-746P-201ENST00000384112 109 ntBASIC-0.61□□□□□ -2.51
ZCCHC3Q9NUD5 AC021146.9-201ENST00000512503 156 ntBASIC-0.61□□□□□ -2.51
ZCCHC3Q9NUD5 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.61□□□□□ -2.51
ZCCHC3Q9NUD5 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.61□□□□□ -2.51
ZCCHC3Q9NUD5 SNORA63.2-201ENST00000362603 126 ntBASIC-0.62□□□□□ -2.51
ZCCHC3Q9NUD5 RNY4P6-201ENST00000363667 96 ntBASIC-0.62□□□□□ -2.51
ZCCHC3Q9NUD5 SNORA62.4-201ENST00000365504 151 ntBASIC-0.62□□□□□ -2.51
ZCCHC3Q9NUD5 MIR569-201ENST00000385228 96 ntBASIC-0.62□□□□□ -2.51
ZCCHC3Q9NUD5 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.62□□□□□ -2.51
ZCCHC3Q9NUD5 RNU2-51P-201ENST00000410708 197 ntBASIC-0.62□□□□□ -2.51
ZCCHC3Q9NUD5 snoU83B.1-201ENST00000517136 88 ntBASIC-0.62□□□□□ -2.51
ZCCHC3Q9NUD5 RNY1P9-201ENST00000532431 109 ntBASIC-0.62□□□□□ -2.51
ZCCHC3Q9NUD5 MIR3064-201ENST00000581130 66 ntBASIC-0.62□□□□□ -2.51
ZCCHC3Q9NUD5 MIR4306-201ENST00000583390 91 ntBASIC-0.62□□□□□ -2.51
ZCCHC3Q9NUD5 MIR4324-201ENST00000584846 72 ntBASIC-0.62□□□□□ -2.51
ZCCHC3Q9NUD5 AL353621.2-201ENST00000605340 133 ntBASIC-0.62□□□□□ -2.51
ZCCHC3Q9NUD5 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.63□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 232.5 ms