Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 snoU13.13-201ENST00000458842 104 ntBASIC-0.6□□□□□ -2.51
HMG20AQ9NP66 RNU7-85P-201ENST00000458851 63 ntBASIC-0.6□□□□□ -2.51
HMG20AQ9NP66 SNORD42B-201ENST00000458893 67 ntBASIC-0.6□□□□□ -2.51
HMG20AQ9NP66 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.6□□□□□ -2.51
HMG20AQ9NP66 RNA5SP395-201ENST00000516567 118 ntBASIC-0.6□□□□□ -2.51
HMG20AQ9NP66 uc_338.36-201ENST00000622331 158 ntBASIC-0.6□□□□□ -2.51
HMG20AQ9NP66 SNORD115-25-201ENST00000362619 82 ntBASIC-0.61□□□□□ -2.51
HMG20AQ9NP66 RNU6-900P-201ENST00000384498 102 ntBASIC-0.61□□□□□ -2.51
HMG20AQ9NP66 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.61□□□□□ -2.51
HMG20AQ9NP66 MIR224-201ENST00000384889 81 ntBASIC-0.61□□□□□ -2.51
HMG20AQ9NP66 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.61□□□□□ -2.51
HMG20AQ9NP66 FGF7P7-201ENST00000514120 227 ntBASIC-0.61□□□□□ -2.51
HMG20AQ9NP66 AL513043.2-201ENST00000573941 143 ntBASIC-0.61□□□□□ -2.51
HMG20AQ9NP66 AC108676.2-201ENST00000605225 163 ntBASIC-0.61□□□□□ -2.51
HMG20AQ9NP66 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.61□□□□□ -2.51
HMG20AQ9NP66 AL157777.2-201ENST00000258070 137 ntBASIC-0.62□□□□□ -2.51
HMG20AQ9NP66 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.62□□□□□ -2.51
HMG20AQ9NP66 SNORD50.2-201ENST00000365465 70 ntBASIC-0.62□□□□□ -2.51
HMG20AQ9NP66 RNU6-901P-201ENST00000384593 106 ntBASIC-0.62□□□□□ -2.51
HMG20AQ9NP66 MIR216B-201ENST00000390186 82 ntBASIC-0.62□□□□□ -2.51
HMG20AQ9NP66 MIR548E-201ENST00000408287 88 ntBASIC-0.62□□□□□ -2.51
HMG20AQ9NP66 RNU6-257P-201ENST00000410238 98 ntBASIC-0.62□□□□□ -2.51
HMG20AQ9NP66 RPS29P8-201ENST00000445109 171 ntBASIC-0.62□□□□□ -2.51
HMG20AQ9NP66 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.62□□□□□ -2.51
HMG20AQ9NP66 RNU6-65P-201ENST00000516332 98 ntBASIC-0.62□□□□□ -2.51
HMG20AQ9NP66 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.62□□□□□ -2.51
HMG20AQ9NP66 MIR4694-201ENST00000578534 80 ntBASIC-0.62□□□□□ -2.51
HMG20AQ9NP66 MIR4280-201ENST00000582178 76 ntBASIC-0.62□□□□□ -2.51
HMG20AQ9NP66 MIR4536-1-201ENST00000583537 88 ntBASIC-0.62□□□□□ -2.51
HMG20AQ9NP66 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.62□□□□□ -2.51
HMG20AQ9NP66 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.63□□□□□ -2.51
HMG20AQ9NP66 RNU6-132P-201ENST00000383863 107 ntBASIC-0.63□□□□□ -2.51
HMG20AQ9NP66 SNORD75.1-201ENST00000408373 60 ntBASIC-0.63□□□□□ -2.51
HMG20AQ9NP66 RNU7-200P-201ENST00000516105 62 ntBASIC-0.63□□□□□ -2.51
HMG20AQ9NP66 RNU6-346P-201ENST00000516288 111 ntBASIC-0.63□□□□□ -2.51
HMG20AQ9NP66 AC068339.1-201ENST00000526965 141 ntBASIC-0.63□□□□□ -2.51
HMG20AQ9NP66 AC093726.3-201ENST00000637588 150 ntBASIC-0.63□□□□□ -2.51
HMG20AQ9NP66 RNY3P2-201ENST00000362918 102 ntBASIC-0.64□□□□□ -2.51
HMG20AQ9NP66 RNU7-55P-201ENST00000459426 62 ntBASIC-0.64□□□□□ -2.51
HMG20AQ9NP66 SNORD38.3-201ENST00000516599 73 ntBASIC-0.64□□□□□ -2.51
HMG20AQ9NP66 MIR4436A-201ENST00000585278 85 ntBASIC-0.64□□□□□ -2.51
HMG20AQ9NP66 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.65□□□□□ -2.51
HMG20AQ9NP66 SNORA40-201ENST00000388090 126 ntBASIC-0.65□□□□□ -2.51
HMG20AQ9NP66 MIR4679-2-201ENST00000578358 77 ntBASIC-0.65□□□□□ -2.51
HMG20AQ9NP66 MIR3140-201ENST00000583685 90 ntBASIC-0.65□□□□□ -2.51
HMG20AQ9NP66 MIR548Z-201ENST00000584743 97 ntBASIC-0.65□□□□□ -2.51
HMG20AQ9NP66 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.66□□□□□ -2.52
HMG20AQ9NP66 RNU6-476P-201ENST00000384726 107 ntBASIC-0.66□□□□□ -2.52
HMG20AQ9NP66 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.66□□□□□ -2.52
HMG20AQ9NP66 SNORA3B-201ENST00000391305 131 ntBASIC-0.66□□□□□ -2.52
HMG20AQ9NP66 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.66□□□□□ -2.52
HMG20AQ9NP66 RNU6-971P-201ENST00000516920 106 ntBASIC-0.66□□□□□ -2.52
HMG20AQ9NP66 RNU6-255P-201ENST00000516957 105 ntBASIC-0.66□□□□□ -2.52
HMG20AQ9NP66 AC103810.7-201ENST00000607821 91 ntBASIC-0.66□□□□□ -2.52
HMG20AQ9NP66 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.67□□□□□ -2.52
HMG20AQ9NP66 MIR548A1-201ENST00000385041 97 ntBASIC-0.67□□□□□ -2.52
HMG20AQ9NP66 U3.27-201ENST00000391237 200 ntBASIC-0.67□□□□□ -2.52
HMG20AQ9NP66 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.67□□□□□ -2.52
HMG20AQ9NP66 RNA5SP25-201ENST00000410815 110 ntBASIC-0.67□□□□□ -2.52
HMG20AQ9NP66 MIR5704-201ENST00000584029 77 ntBASIC-0.67□□□□□ -2.52
HMG20AQ9NP66 AL391099.1-201ENST00000624635 187 ntBASIC-0.67□□□□□ -2.52
HMG20AQ9NP66 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.68□□□□□ -2.52
HMG20AQ9NP66 SNORD33.1-201ENST00000516213 88 ntBASIC-0.68□□□□□ -2.52
HMG20AQ9NP66 AC090425.1-201ENST00000610007 140 ntBASIC-0.68□□□□□ -2.52
HMG20AQ9NP66 MIR6086-201ENST00000638065 55 ntBASIC-0.68□□□□□ -2.52
HMG20AQ9NP66 RNU6-502P-201ENST00000362419 108 ntBASIC-0.69□□□□□ -2.52
HMG20AQ9NP66 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.69□□□□□ -2.52
HMG20AQ9NP66 MIR204-201ENST00000385200 110 ntBASIC-0.69□□□□□ -2.52
HMG20AQ9NP66 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.69□□□□□ -2.52
HMG20AQ9NP66 MIR5009-201ENST00000578736 100 ntBASIC-0.69□□□□□ -2.52
HMG20AQ9NP66 MIR3064-201ENST00000581130 66 ntBASIC-0.69□□□□□ -2.52
HMG20AQ9NP66 MIR6851-201ENST00000617060 67 ntBASIC-0.69□□□□□ -2.52
HMG20AQ9NP66 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.7□□□□□ -2.52
HMG20AQ9NP66 SNORD114-4-201ENST00000363962 75 ntBASIC-0.7□□□□□ -2.52
HMG20AQ9NP66 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.7□□□□□ -2.52
HMG20AQ9NP66 RNU4-63P-201ENST00000411313 118 ntBASIC-0.7□□□□□ -2.52
HMG20AQ9NP66 MIR3914-2-201ENST00000637339 95 ntBASIC-0.7□□□□□ -2.52
HMG20AQ9NP66 SNORD95.1-201ENST00000364099 68 ntBASIC-0.71□□□□□ -2.52
HMG20AQ9NP66 RNU6-813P-201ENST00000384691 107 ntBASIC-0.71□□□□□ -2.52
HMG20AQ9NP66 SNORD90-201ENST00000391145 111 ntBASIC-0.71□□□□□ -2.52
HMG20AQ9NP66 RNU6-795P-201ENST00000516323 103 ntBASIC-0.71□□□□□ -2.52
HMG20AQ9NP66 SNORA40.17-201ENST00000517256 115 ntBASIC-0.71□□□□□ -2.52
HMG20AQ9NP66 MIR4777-201ENST00000583710 86 ntBASIC-0.71□□□□□ -2.52
HMG20AQ9NP66 MIR8068-201ENST00000618032 68 ntBASIC-0.71□□□□□ -2.52
HMG20AQ9NP66 SNORD114-14-201ENST00000362723 75 ntBASIC-0.72□□□□□ -2.52
HMG20AQ9NP66 RNU6-990P-201ENST00000364385 104 ntBASIC-0.72□□□□□ -2.52
HMG20AQ9NP66 SNORD45B-201ENST00000364617 72 ntBASIC-0.72□□□□□ -2.52
HMG20AQ9NP66 SNORD114-15-201ENST00000364687 72 ntBASIC-0.72□□□□□ -2.52
HMG20AQ9NP66 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.72□□□□□ -2.52
HMG20AQ9NP66 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.72□□□□□ -2.52
HMG20AQ9NP66 RNU6-644P-201ENST00000391155 98 ntBASIC-0.72□□□□□ -2.52
HMG20AQ9NP66 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.72□□□□□ -2.52
HMG20AQ9NP66 SNORD4B-201ENST00000459083 72 ntBASIC-0.72□□□□□ -2.52
HMG20AQ9NP66 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.72□□□□□ -2.52
HMG20AQ9NP66 SNORA63.2-201ENST00000362603 126 ntBASIC-0.73□□□□□ -2.53
HMG20AQ9NP66 RNU6-973P-201ENST00000364690 107 ntBASIC-0.73□□□□□ -2.53
HMG20AQ9NP66 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.73□□□□□ -2.53
HMG20AQ9NP66 RNA5SP292-201ENST00000390974 118 ntBASIC-0.73□□□□□ -2.53
HMG20AQ9NP66 SNORD2-201ENST00000459163 69 ntBASIC-0.73□□□□□ -2.53
HMG20AQ9NP66 MIR4439-201ENST00000583746 80 ntBASIC-0.73□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms