Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.14□□□□□ -2.59
KIAA1549Q9HCM3 Y_RNA.527-201ENST00000384573 102 ntBASIC-1.14□□□□□ -2.59
KIAA1549Q9HCM3 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.14□□□□□ -2.59
KIAA1549Q9HCM3 RNA5SP86-201ENST00000390869 98 ntBASIC-1.14□□□□□ -2.59
KIAA1549Q9HCM3 RNU6-400P-201ENST00000391173 106 ntBASIC-1.14□□□□□ -2.59
KIAA1549Q9HCM3 RNU6-493P-201ENST00000391321 108 ntBASIC-1.14□□□□□ -2.59
KIAA1549Q9HCM3 MIR548H1-201ENST00000408610 102 ntBASIC-1.14□□□□□ -2.59
KIAA1549Q9HCM3 AC108019.1-201ENST00000512540 175 ntBASIC-1.14□□□□□ -2.59
KIAA1549Q9HCM3 RNU6-718P-201ENST00000516166 105 ntBASIC-1.14□□□□□ -2.59
KIAA1549Q9HCM3 AC120024.2-201ENST00000576526 175 ntBASIC-1.14□□□□□ -2.59
KIAA1549Q9HCM3 MIR4756-201ENST00000577874 78 ntBASIC-1.14□□□□□ -2.59
KIAA1549Q9HCM3 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.14□□□□□ -2.59
KIAA1549Q9HCM3 MIR6874-201ENST00000635894 71 ntBASIC-1.14□□□□□ -2.59
KIAA1549Q9HCM3 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.15□□□□□ -2.59
KIAA1549Q9HCM3 Y_RNA.183-201ENST00000363882 113 ntBASIC-1.15□□□□□ -2.59
KIAA1549Q9HCM3 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.15□□□□□ -2.59
KIAA1549Q9HCM3 Y_RNA.197-201ENST00000364004 102 ntBASIC-1.15□□□□□ -2.59
KIAA1549Q9HCM3 RNU6-326P-201ENST00000365480 107 ntBASIC-1.15□□□□□ -2.59
KIAA1549Q9HCM3 AL121914.1-201ENST00000450188 156 ntBASIC-1.15□□□□□ -2.59
KIAA1549Q9HCM3 RNA5SP180-201ENST00000516181 101 ntBASIC-1.15□□□□□ -2.59
KIAA1549Q9HCM3 RNY3P16-201ENST00000516338 101 ntBASIC-1.15□□□□□ -2.59
KIAA1549Q9HCM3 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.15□□□□□ -2.59
KIAA1549Q9HCM3 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.15□□□□□ -2.59
KIAA1549Q9HCM3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.15□□□□□ -2.59
KIAA1549Q9HCM3 MIR6844-201ENST00000637122 62 ntBASIC-1.15□□□□□ -2.59
KIAA1549Q9HCM3 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.16□□□□□ -2.59
KIAA1549Q9HCM3 Y_RNA.262-201ENST00000364641 102 ntBASIC-1.16□□□□□ -2.59
KIAA1549Q9HCM3 AL035461.1-201ENST00000421490 332 ntBASIC-1.16□□□□□ -2.59
KIAA1549Q9HCM3 RNU6-983P-201ENST00000516004 103 ntBASIC-1.16□□□□□ -2.59
KIAA1549Q9HCM3 RNU6-1143P-201ENST00000516125 104 ntBASIC-1.16□□□□□ -2.59
KIAA1549Q9HCM3 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.16□□□□□ -2.59
KIAA1549Q9HCM3 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.16□□□□□ -2.6
KIAA1549Q9HCM3 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.16□□□□□ -2.6
KIAA1549Q9HCM3 SNORD18B-201ENST00000365659 72 ntBASIC-1.16□□□□□ -2.6
KIAA1549Q9HCM3 RNU6-841P-201ENST00000383872 107 ntBASIC-1.16□□□□□ -2.6
KIAA1549Q9HCM3 MIR1302-11-201ENST00000408051 138 ntBASIC-1.16□□□□□ -2.6
KIAA1549Q9HCM3 MIR1302-9-201ENST00000408365 138 ntBASIC-1.16□□□□□ -2.6
KIAA1549Q9HCM3 MIR1302-10-201ENST00000408734 138 ntBASIC-1.16□□□□□ -2.6
KIAA1549Q9HCM3 SNORD4B-201ENST00000459083 72 ntBASIC-1.16□□□□□ -2.6
KIAA1549Q9HCM3 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.16□□□□□ -2.6
KIAA1549Q9HCM3 MIR1302-2-201ENST00000607096 138 ntBASIC-1.16□□□□□ -2.6
KIAA1549Q9HCM3 Y_RNA.318-201ENST00000365131 97 ntBASIC-1.17□□□□□ -2.6
KIAA1549Q9HCM3 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.17□□□□□ -2.6
KIAA1549Q9HCM3 FGF7P6-202ENST00000451282 293 ntBASIC-1.17□□□□□ -2.6
KIAA1549Q9HCM3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.17□□□□□ -2.6
KIAA1549Q9HCM3 MTND3P22-201ENST00000510932 243 ntBASIC-1.17□□□□□ -2.6
KIAA1549Q9HCM3 SNORD116.3-201ENST00000517176 78 ntBASIC-1.17□□□□□ -2.6
KIAA1549Q9HCM3 MIR3163-201ENST00000581592 73 ntBASIC-1.17□□□□□ -2.6
KIAA1549Q9HCM3 AL160413.1-201ENST00000622780 310 ntBASIC-1.17□□□□□ -2.6
KIAA1549Q9HCM3 RNU6-770P-201ENST00000363929 105 ntBASIC-1.17□□□□□ -2.6
KIAA1549Q9HCM3 RNU6-450P-201ENST00000364654 107 ntBASIC-1.17□□□□□ -2.6
KIAA1549Q9HCM3 Y_RNA.679-201ENST00000516416 91 ntBASIC-1.17□□□□□ -2.6
KIAA1549Q9HCM3 AC113195.1-201ENST00000579952 141 ntBASIC-1.17□□□□□ -2.6
KIAA1549Q9HCM3 MIR5683-201ENST00000636514 76 ntBASIC-1.17□□□□□ -2.6
KIAA1549Q9HCM3 RNU6-238P-201ENST00000363313 106 ntBASIC-1.18□□□□□ -2.6
KIAA1549Q9HCM3 SNORD18.1-201ENST00000363807 70 ntBASIC-1.18□□□□□ -2.6
KIAA1549Q9HCM3 RNU6-382P-201ENST00000365181 106 ntBASIC-1.18□□□□□ -2.6
KIAA1549Q9HCM3 Y_RNA.516-201ENST00000384541 124 ntBASIC-1.18□□□□□ -2.6
KIAA1549Q9HCM3 MT-TL1-201ENST00000386347 75 ntBASIC-1.18□□□□□ -2.6
KIAA1549Q9HCM3 RNU2-38P-201ENST00000410856 79 ntBASIC-1.18□□□□□ -2.6
KIAA1549Q9HCM3 MTND3P2-201ENST00000438452 342 ntBASIC-1.18□□□□□ -2.6
KIAA1549Q9HCM3 MIR3613-201ENST00000579844 87 ntBASIC-1.18□□□□□ -2.6
KIAA1549Q9HCM3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.18□□□□□ -2.6
KIAA1549Q9HCM3 RNU6-824P-201ENST00000363724 104 ntBASIC-1.19□□□□□ -2.6
KIAA1549Q9HCM3 Y_RNA.210-201ENST00000364161 110 ntBASIC-1.19□□□□□ -2.6
KIAA1549Q9HCM3 RNU6-409P-201ENST00000384114 104 ntBASIC-1.19□□□□□ -2.6
KIAA1549Q9HCM3 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.19□□□□□ -2.6
KIAA1549Q9HCM3 RNU6-630P-201ENST00000391258 106 ntBASIC-1.19□□□□□ -2.6
KIAA1549Q9HCM3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.19□□□□□ -2.6
KIAA1549Q9HCM3 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.19□□□□□ -2.6
KIAA1549Q9HCM3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-1.19□□□□□ -2.6
KIAA1549Q9HCM3 MIR548F1-201ENST00000408667 84 ntBASIC-1.19□□□□□ -2.6
KIAA1549Q9HCM3 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.19□□□□□ -2.6
KIAA1549Q9HCM3 AP000770.2-201ENST00000623694 100 ntBASIC-1.19□□□□□ -2.6
KIAA1549Q9HCM3 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.2□□□□□ -2.6
KIAA1549Q9HCM3 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.2□□□□□ -2.6
KIAA1549Q9HCM3 RNU6-696P-201ENST00000390834 107 ntBASIC-1.2□□□□□ -2.6
KIAA1549Q9HCM3 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.2□□□□□ -2.6
KIAA1549Q9HCM3 U4.2-201ENST00000618561 85 ntBASIC-1.2□□□□□ -2.6
KIAA1549Q9HCM3 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.2□□□□□ -2.6
KIAA1549Q9HCM3 RNU5F-1-201ENST00000362507 117 ntBASIC-1.21□□□□□ -2.6
KIAA1549Q9HCM3 SNORD42.2-201ENST00000365570 69 ntBASIC-1.21□□□□□ -2.6
KIAA1549Q9HCM3 MIR1207-201ENST00000408249 87 ntBASIC-1.21□□□□□ -2.6
KIAA1549Q9HCM3 MIR548Q-201ENST00000408404 100 ntBASIC-1.21□□□□□ -2.6
KIAA1549Q9HCM3 MIR548I1-201ENST00000408810 149 ntBASIC-1.21□□□□□ -2.6
KIAA1549Q9HCM3 RNU6-656P-201ENST00000516785 107 ntBASIC-1.21□□□□□ -2.6
KIAA1549Q9HCM3 RNU7-6P-201ENST00000516845 62 ntBASIC-1.21□□□□□ -2.6
KIAA1549Q9HCM3 MIR3064-201ENST00000581130 66 ntBASIC-1.21□□□□□ -2.6
KIAA1549Q9HCM3 MIR548AM-201ENST00000584298 74 ntBASIC-1.21□□□□□ -2.6
KIAA1549Q9HCM3 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.21□□□□□ -2.6
KIAA1549Q9HCM3 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.21□□□□□ -2.6
KIAA1549Q9HCM3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-1.21□□□□□ -2.6
KIAA1549Q9HCM3 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.21□□□□□ -2.6
KIAA1549Q9HCM3 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.21□□□□□ -2.6
KIAA1549Q9HCM3 MIR548D2-201ENST00000384955 97 ntBASIC-1.21□□□□□ -2.6
KIAA1549Q9HCM3 SNORA75.5-201ENST00000391291 81 ntBASIC-1.21□□□□□ -2.6
KIAA1549Q9HCM3 Y_RNA.797-201ENST00000515977 94 ntBASIC-1.21□□□□□ -2.6
KIAA1549Q9HCM3 RNA5SP272-201ENST00000516095 111 ntBASIC-1.21□□□□□ -2.6
KIAA1549Q9HCM3 U4.4-201ENST00000620626 117 ntBASIC-1.21□□□□□ -2.6
KIAA1549Q9HCM3 RNA5SP405-201ENST00000363059 114 ntBASIC-1.22□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 239.5 ms