Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
SEC61A2Q9H9S3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.02□□□□□ -2.25
SEC61A2Q9H9S3 RNA5SP255-201ENST00000516370 107 ntBASIC1.01□□□□□ -2.25
SEC61A2Q9H9S3 RNA5SP47-201ENST00000517230 109 ntBASIC1.01□□□□□ -2.25
SEC61A2Q9H9S3 NAMPTP3-201ENST00000569273 224 ntBASIC1.01□□□□□ -2.25
SEC61A2Q9H9S3 AC025627.3-201ENST00000582078 182 ntBASIC1.01□□□□□ -2.25
SEC61A2Q9H9S3 MIR3675-201ENST00000583661 73 ntBASIC1.01□□□□□ -2.25
SEC61A2Q9H9S3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1□□□□□ -2.25
SEC61A2Q9H9S3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
SEC61A2Q9H9S3 RNU1-124P-201ENST00000363861 145 ntBASIC1□□□□□ -2.25
SEC61A2Q9H9S3 RNU6-54P-201ENST00000365563 107 ntBASIC1□□□□□ -2.25
SEC61A2Q9H9S3 RNU6-274P-201ENST00000459566 107 ntBASIC1□□□□□ -2.25
SEC61A2Q9H9S3 RNU6-871P-201ENST00000516122 100 ntBASIC1□□□□□ -2.25
SEC61A2Q9H9S3 RNU6-726P-201ENST00000364680 107 ntBASIC0.99□□□□□ -2.25
SEC61A2Q9H9S3 RNU6-939P-201ENST00000384634 107 ntBASIC0.99□□□□□ -2.25
SEC61A2Q9H9S3 RNU6-634P-201ENST00000459134 106 ntBASIC0.99□□□□□ -2.25
SEC61A2Q9H9S3 SNORD45.1-201ENST00000363181 77 ntBASIC0.98□□□□□ -2.25
SEC61A2Q9H9S3 SNORD114-27-201ENST00000363766 70 ntBASIC0.98□□□□□ -2.25
SEC61A2Q9H9S3 SNORD115-31-201ENST00000365318 82 ntBASIC0.98□□□□□ -2.25
SEC61A2Q9H9S3 RNU6V-201ENST00000384105 107 ntBASIC0.98□□□□□ -2.25
SEC61A2Q9H9S3 SNORD41.1-201ENST00000391000 69 ntBASIC0.98□□□□□ -2.25
SEC61A2Q9H9S3 AC244098.3-201ENST00000424803 96 ntBASIC0.98□□□□□ -2.25
SEC61A2Q9H9S3 AL691482.2-201ENST00000457453 84 ntBASIC0.98□□□□□ -2.25
SEC61A2Q9H9S3 MIR4295-201ENST00000585286 85 ntBASIC0.98□□□□□ -2.25
SEC61A2Q9H9S3 MIR548O2-201ENST00000616090 70 ntBASIC0.98□□□□□ -2.25
SEC61A2Q9H9S3 MIR18A-201ENST00000362310 71 ntBASIC0.97□□□□□ -2.25
SEC61A2Q9H9S3 MIR203A-201ENST00000384836 110 ntBASIC0.97□□□□□ -2.25
SEC61A2Q9H9S3 MIR618-201ENST00000385287 98 ntBASIC0.97□□□□□ -2.25
SEC61A2Q9H9S3 MIR8070-201ENST00000616510 88 ntBASIC0.97□□□□□ -2.25
SEC61A2Q9H9S3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
SEC61A2Q9H9S3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.96□□□□□ -2.26
SEC61A2Q9H9S3 SNORD45A-201ENST00000384512 84 ntBASIC0.96□□□□□ -2.26
SEC61A2Q9H9S3 MIR216B-201ENST00000390186 82 ntBASIC0.96□□□□□ -2.26
SEC61A2Q9H9S3 RNU6-269P-201ENST00000391077 97 ntBASIC0.96□□□□□ -2.26
SEC61A2Q9H9S3 SNORD75.2-201ENST00000408784 58 ntBASIC0.96□□□□□ -2.26
SEC61A2Q9H9S3 RNA5SP222-201ENST00000411039 105 ntBASIC0.96□□□□□ -2.26
SEC61A2Q9H9S3 RNU7-74P-201ENST00000459104 62 ntBASIC0.96□□□□□ -2.26
SEC61A2Q9H9S3 AC087343.1-201ENST00000477341 475 ntBASIC0.96□□□□□ -2.26
SEC61A2Q9H9S3 SCARNA16.5-201ENST00000517114 183 ntBASIC0.96□□□□□ -2.26
SEC61A2Q9H9S3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.96□□□□□ -2.26
SEC61A2Q9H9S3 MIR96-201ENST00000362288 78 ntBASIC0.95□□□□□ -2.26
SEC61A2Q9H9S3 RNU6-495P-201ENST00000362995 107 ntBASIC0.95□□□□□ -2.26
SEC61A2Q9H9S3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
SEC61A2Q9H9S3 RNU6-540P-201ENST00000384622 101 ntBASIC0.95□□□□□ -2.26
SEC61A2Q9H9S3 RNU6-604P-201ENST00000390917 100 ntBASIC0.95□□□□□ -2.26
SEC61A2Q9H9S3 SNORD30.1-201ENST00000391309 70 ntBASIC0.95□□□□□ -2.26
SEC61A2Q9H9S3 OR2A41P-201ENST00000473586 105 ntBASIC0.95□□□□□ -2.26
SEC61A2Q9H9S3 Y_RNA.676-201ENST00000516393 96 ntBASIC0.95□□□□□ -2.26
SEC61A2Q9H9S3 RNA5SP102-201ENST00000516865 106 ntBASIC0.95□□□□□ -2.26
SEC61A2Q9H9S3 MIR4460-201ENST00000577862 86 ntBASIC0.95□□□□□ -2.26
SEC61A2Q9H9S3 SNORA36.1-201ENST00000363424 132 ntBASIC0.94□□□□□ -2.26
SEC61A2Q9H9S3 RNU6-649P-201ENST00000384463 107 ntBASIC0.94□□□□□ -2.26
SEC61A2Q9H9S3 SNORD42B-201ENST00000458893 67 ntBASIC0.94□□□□□ -2.26
SEC61A2Q9H9S3 RNA5SP227-201ENST00000516184 113 ntBASIC0.94□□□□□ -2.26
SEC61A2Q9H9S3 RNU5B-6P-201ENST00000516765 68 ntBASIC0.94□□□□□ -2.26
SEC61A2Q9H9S3 SNORD114-21-201ENST00000606412 72 ntBASIC0.94□□□□□ -2.26
SEC61A2Q9H9S3 AC103810.9-201ENST00000606688 112 ntBASIC0.94□□□□□ -2.26
SEC61A2Q9H9S3 MIR6509-201ENST00000614603 85 ntBASIC0.94□□□□□ -2.26
SEC61A2Q9H9S3 RNU1-141P-201ENST00000364623 158 ntBASIC0.93□□□□□ -2.26
SEC61A2Q9H9S3 RNY1P8-201ENST00000383970 114 ntBASIC0.93□□□□□ -2.26
SEC61A2Q9H9S3 RNU6-788P-201ENST00000390967 104 ntBASIC0.93□□□□□ -2.26
SEC61A2Q9H9S3 AC093423.1-201ENST00000440817 142 ntBASIC0.93□□□□□ -2.26
SEC61A2Q9H9S3 RNA5SP484-201ENST00000458857 111 ntBASIC0.93□□□□□ -2.26
SEC61A2Q9H9S3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.93□□□□□ -2.26
SEC61A2Q9H9S3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
SEC61A2Q9H9S3 SNORD115-22-201ENST00000364456 82 ntBASIC0.92□□□□□ -2.26
SEC61A2Q9H9S3 RNU6-1039P-201ENST00000383931 107 ntBASIC0.92□□□□□ -2.26
SEC61A2Q9H9S3 RNU6-895P-201ENST00000384125 103 ntBASIC0.92□□□□□ -2.26
SEC61A2Q9H9S3 MIR6767-201ENST00000637302 66 ntBASIC0.92□□□□□ -2.26
SEC61A2Q9H9S3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
SEC61A2Q9H9S3 MT-TY-201ENST00000387409 66 ntBASIC0.91□□□□□ -2.26
SEC61A2Q9H9S3 RNU6-663P-201ENST00000391105 106 ntBASIC0.91□□□□□ -2.26
SEC61A2Q9H9S3 MIR1276-201ENST00000408707 83 ntBASIC0.91□□□□□ -2.26
SEC61A2Q9H9S3 RNU7-24P-201ENST00000458867 62 ntBASIC0.91□□□□□ -2.26
SEC61A2Q9H9S3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.91□□□□□ -2.26
SEC61A2Q9H9S3 RNU6-752P-201ENST00000516376 102 ntBASIC0.91□□□□□ -2.26
SEC61A2Q9H9S3 RNU6-539P-201ENST00000516665 103 ntBASIC0.91□□□□□ -2.26
SEC61A2Q9H9S3 RNA5SP268-201ENST00000516828 124 ntBASIC0.91□□□□□ -2.26
SEC61A2Q9H9S3 RNA5SP94-201ENST00000516917 108 ntBASIC0.91□□□□□ -2.26
SEC61A2Q9H9S3 SNORA36.2-201ENST00000384004 127 ntBASIC0.9□□□□□ -2.27
SEC61A2Q9H9S3 RNU6-881P-201ENST00000516813 102 ntBASIC0.9□□□□□ -2.27
SEC61A2Q9H9S3 AL353765.1-201ENST00000605514 183 ntBASIC0.9□□□□□ -2.27
SEC61A2Q9H9S3 MIR6828-201ENST00000636181 60 ntBASIC0.9□□□□□ -2.27
SEC61A2Q9H9S3 SNORA8.2-201ENST00000384372 139 ntBASIC0.89□□□□□ -2.27
SEC61A2Q9H9S3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.89□□□□□ -2.27
SEC61A2Q9H9S3 AC018659.1-201ENST00000551083 169 ntBASIC0.89□□□□□ -2.27
SEC61A2Q9H9S3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.88□□□□□ -2.27
SEC61A2Q9H9S3 MIR7107-201ENST00000611489 80 ntBASIC0.88□□□□□ -2.27
SEC61A2Q9H9S3 MIR8053-201ENST00000613344 75 ntBASIC0.88□□□□□ -2.27
SEC61A2Q9H9S3 AL162376.1-201ENST00000624117 175 ntBASIC0.88□□□□□ -2.27
SEC61A2Q9H9S3 SNORD113.1-201ENST00000363280 73 ntBASIC0.87□□□□□ -2.27
SEC61A2Q9H9S3 RNU6-990P-201ENST00000364385 104 ntBASIC0.87□□□□□ -2.27
SEC61A2Q9H9S3 RNU4-38P-201ENST00000364472 129 ntBASIC0.87□□□□□ -2.27
SEC61A2Q9H9S3 RNU6-982P-201ENST00000516216 102 ntBASIC0.87□□□□□ -2.27
SEC61A2Q9H9S3 RNA5SP147-201ENST00000516493 109 ntBASIC0.87□□□□□ -2.27
SEC61A2Q9H9S3 MIR4752-201ENST00000579672 72 ntBASIC0.87□□□□□ -2.27
SEC61A2Q9H9S3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
SEC61A2Q9H9S3 RNU6-1187P-201ENST00000364771 110 ntBASIC0.86□□□□□ -2.27
SEC61A2Q9H9S3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.86□□□□□ -2.27
SEC61A2Q9H9S3 MIR3657-201ENST00000584818 117 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms