Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 RNA5SP338-201ENST00000410495 85 ntBASIC3.5□□□□□ -1.85
SCAF1Q9H7N4 AL591704.2-201ENST00000421658 181 ntBASIC3.5□□□□□ -1.85
SCAF1Q9H7N4 HMGN2P38-201ENST00000423806 265 ntBASIC3.5□□□□□ -1.85
SCAF1Q9H7N4 AC108667.1-201ENST00000428618 249 ntBASIC3.5□□□□□ -1.85
SCAF1Q9H7N4 snoU13.9-201ENST00000458927 103 ntBASIC3.5□□□□□ -1.85
SCAF1Q9H7N4 SCARNA17.3-201ENST00000516381 125 ntBASIC3.5□□□□□ -1.85
SCAF1Q9H7N4 MIR4639-201ENST00000584938 69 ntBASIC3.5□□□□□ -1.85
SCAF1Q9H7N4 U6.96-201ENST00000636425 70 ntBASIC3.5□□□□□ -1.85
SCAF1Q9H7N4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SCAF1Q9H7N4 RNU6-246P-201ENST00000384702 107 ntBASIC3.49□□□□□ -1.85
SCAF1Q9H7N4 MIR517C-201ENST00000385103 95 ntBASIC3.49□□□□□ -1.85
SCAF1Q9H7N4 RNA5SP484-201ENST00000458857 111 ntBASIC3.49□□□□□ -1.85
SCAF1Q9H7N4 snoU13.31-201ENST00000607291 104 ntBASIC3.49□□□□□ -1.85
SCAF1Q9H7N4 MIR21-201ENST00000362134 72 ntBASIC3.48□□□□□ -1.85
SCAF1Q9H7N4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SCAF1Q9H7N4 AC090617.8-201ENST00000623339 167 ntBASIC3.48□□□□□ -1.85
SCAF1Q9H7N4 MIR144-201ENST00000384886 86 ntBASIC3.47□□□□□ -1.85
SCAF1Q9H7N4 RNU7-21P-201ENST00000459430 62 ntBASIC3.47□□□□□ -1.85
SCAF1Q9H7N4 AL512310.8-201ENST00000550183 120 ntBASIC3.47□□□□□ -1.85
SCAF1Q9H7N4 MIR5194-201ENST00000582634 120 ntBASIC3.47□□□□□ -1.85
SCAF1Q9H7N4 MIR4448-201ENST00000584360 86 ntBASIC3.47□□□□□ -1.85
SCAF1Q9H7N4 MIR6895-201ENST00000613497 78 ntBASIC3.47□□□□□ -1.85
SCAF1Q9H7N4 MIR6840-201ENST00000611937 71 ntBASIC3.46□□□□□ -1.85
SCAF1Q9H7N4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SCAF1Q9H7N4 AC002350.1-201ENST00000490759 375 ntBASIC3.45□□□□□ -1.86
SCAF1Q9H7N4 MIR519A2-201ENST00000384990 87 ntBASIC3.44□□□□□ -1.86
SCAF1Q9H7N4 RNU6-321P-201ENST00000410912 106 ntBASIC3.44□□□□□ -1.86
SCAF1Q9H7N4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SCAF1Q9H7N4 MIR548E-201ENST00000408287 88 ntBASIC3.44□□□□□ -1.86
SCAF1Q9H7N4 RMST_2.1-201ENST00000617263 136 ntBASIC3.44□□□□□ -1.86
SCAF1Q9H7N4 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.44□□□□□ -1.86
SCAF1Q9H7N4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SCAF1Q9H7N4 SNORA8.2-201ENST00000384372 139 ntBASIC3.42□□□□□ -1.86
SCAF1Q9H7N4 RNU6-469P-201ENST00000516253 101 ntBASIC3.42□□□□□ -1.86
SCAF1Q9H7N4 RNU6-135P-201ENST00000516769 101 ntBASIC3.42□□□□□ -1.86
SCAF1Q9H7N4 MIR548AL-201ENST00000578416 97 ntBASIC3.42□□□□□ -1.86
SCAF1Q9H7N4 MIR4287-201ENST00000579398 78 ntBASIC3.42□□□□□ -1.86
SCAF1Q9H7N4 MIR548AG1-201ENST00000579932 66 ntBASIC3.42□□□□□ -1.86
SCAF1Q9H7N4 MIR5092-201ENST00000583139 88 ntBASIC3.42□□□□□ -1.86
SCAF1Q9H7N4 U6.103-201ENST00000637085 61 ntBASIC3.42□□□□□ -1.86
SCAF1Q9H7N4 AC080100.1-201ENST00000624239 5356 ntBASIC3.41□□□□□ -1.86
SCAF1Q9H7N4 Y_RNA.109-201ENST00000363215 102 ntBASIC3.41□□□□□ -1.86
SCAF1Q9H7N4 RNU6-696P-201ENST00000390834 107 ntBASIC3.41□□□□□ -1.86
SCAF1Q9H7N4 RN7SKP88-201ENST00000516847 250 ntBASIC3.41□□□□□ -1.86
SCAF1Q9H7N4 MIR4713-201ENST00000582691 75 ntBASIC3.41□□□□□ -1.86
SCAF1Q9H7N4 7SK.8-201ENST00000612110 250 ntBASIC3.41□□□□□ -1.86
SCAF1Q9H7N4 7SK.11-201ENST00000615477 250 ntBASIC3.41□□□□□ -1.86
SCAF1Q9H7N4 7SK.13-201ENST00000622040 250 ntBASIC3.41□□□□□ -1.86
SCAF1Q9H7N4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SCAF1Q9H7N4 RNA5SP456-201ENST00000364002 114 ntBASIC3.4□□□□□ -1.87
SCAF1Q9H7N4 Y_RNA.407-201ENST00000383986 113 ntBASIC3.4□□□□□ -1.87
SCAF1Q9H7N4 MIR1255B2-201ENST00000408618 67 ntBASIC3.4□□□□□ -1.87
SCAF1Q9H7N4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.39□□□□□ -1.87
SCAF1Q9H7N4 MIR378A-201ENST00000362177 66 ntBASIC3.39□□□□□ -1.87
SCAF1Q9H7N4 MIR579-201ENST00000385221 98 ntBASIC3.39□□□□□ -1.87
SCAF1Q9H7N4 SNORA26.9-201ENST00000391322 122 ntBASIC3.39□□□□□ -1.87
SCAF1Q9H7N4 SNORD23.1-201ENST00000408212 104 ntBASIC3.39□□□□□ -1.87
SCAF1Q9H7N4 RNU7-90P-201ENST00000459216 62 ntBASIC3.39□□□□□ -1.87
SCAF1Q9H7N4 AC104435.1-201ENST00000483483 166 ntBASIC3.39□□□□□ -1.87
SCAF1Q9H7N4 MIR548AE1-201ENST00000583292 70 ntBASIC3.39□□□□□ -1.87
SCAF1Q9H7N4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SCAF1Q9H7N4 SNORD33-201ENST00000362761 85 ntBASIC3.38□□□□□ -1.87
SCAF1Q9H7N4 MIR5694-201ENST00000581190 76 ntBASIC3.38□□□□□ -1.87
SCAF1Q9H7N4 MIR516B1-201ENST00000385211 90 ntBASIC3.37□□□□□ -1.87
SCAF1Q9H7N4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SCAF1Q9H7N4 RNU1-40P-201ENST00000516816 164 ntBASIC3.36□□□□□ -1.87
SCAF1Q9H7N4 RNU1-97P-201ENST00000516872 164 ntBASIC3.36□□□□□ -1.87
SCAF1Q9H7N4 SNORA80D-201ENST00000384488 135 ntBASIC3.35□□□□□ -1.87
SCAF1Q9H7N4 RNA5SP325-201ENST00000363756 130 ntBASIC3.34□□□□□ -1.87
SCAF1Q9H7N4 RNU6-910P-201ENST00000390844 107 ntBASIC3.34□□□□□ -1.87
SCAF1Q9H7N4 MIR1827-201ENST00000408549 66 ntBASIC3.34□□□□□ -1.87
SCAF1Q9H7N4 TRMT112P2-201ENST00000512910 132 ntBASIC3.34□□□□□ -1.87
SCAF1Q9H7N4 RNA5SP480-201ENST00000516840 109 ntBASIC3.34□□□□□ -1.87
SCAF1Q9H7N4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SCAF1Q9H7N4 SNORA17.3-201ENST00000391159 129 ntBASIC3.33□□□□□ -1.88
SCAF1Q9H7N4 RNA5SP47-201ENST00000517230 109 ntBASIC3.33□□□□□ -1.88
SCAF1Q9H7N4 MIR4473-201ENST00000583731 91 ntBASIC3.33□□□□□ -1.88
SCAF1Q9H7N4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SCAF1Q9H7N4 SNORD18A-201ENST00000363753 72 ntBASIC3.32□□□□□ -1.88
SCAF1Q9H7N4 AC098934.3-201ENST00000430450 190 ntBASIC3.32□□□□□ -1.88
SCAF1Q9H7N4 RNU6-717P-201ENST00000459076 104 ntBASIC3.32□□□□□ -1.88
SCAF1Q9H7N4 AC026436.1-201ENST00000510537 270 ntBASIC3.32□□□□□ -1.88
SCAF1Q9H7N4 MIR6845-201ENST00000613182 61 ntBASIC3.32□□□□□ -1.88
SCAF1Q9H7N4 RNU4-52P-201ENST00000384209 138 ntBASIC3.31□□□□□ -1.88
SCAF1Q9H7N4 MIR1291-201ENST00000627649 87 ntBASIC3.31□□□□□ -1.88
SCAF1Q9H7N4 MIR524-201ENST00000385242 87 ntBASIC3.3□□□□□ -1.88
SCAF1Q9H7N4 AC243829.6-201ENST00000612652 106 ntBASIC3.3□□□□□ -1.88
SCAF1Q9H7N4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SCAF1Q9H7N4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SCAF1Q9H7N4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
SCAF1Q9H7N4 AC245884.12-201ENST00000615364 59 ntBASIC3.28□□□□□ -1.88
SCAF1Q9H7N4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SCAF1Q9H7N4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
SCAF1Q9H7N4 RNU6-1206P-201ENST00000516339 103 ntBASIC3.27□□□□□ -1.89
SCAF1Q9H7N4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC3.27□□□□□ -1.89
SCAF1Q9H7N4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
SCAF1Q9H7N4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC3.25□□□□□ -1.89
SCAF1Q9H7N4 SNORD79.1-201ENST00000516069 84 ntBASIC3.25□□□□□ -1.89
SCAF1Q9H7N4 AC243829.3-201ENST00000622177 108 ntBASIC3.25□□□□□ -1.89
SCAF1Q9H7N4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 304 ms