Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 MIR664B-201ENST00000626756 61 ntBASIC-2.39□□□□□ -2.79
CHMP4BQ9H444 AC021753.1-201ENST00000635724 168 ntBASIC-2.39□□□□□ -2.79
CHMP4BQ9H444 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.4□□□□□ -2.79
CHMP4BQ9H444 Y_RNA.527-201ENST00000384573 102 ntBASIC-2.4□□□□□ -2.79
CHMP4BQ9H444 MIR507-201ENST00000385234 94 ntBASIC-2.4□□□□□ -2.79
CHMP4BQ9H444 MIR4643-201ENST00000577473 78 ntBASIC-2.4□□□□□ -2.79
CHMP4BQ9H444 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.41□□□□□ -2.8
CHMP4BQ9H444 Y_RNA.190-201ENST00000363964 101 ntBASIC-2.41□□□□□ -2.8
CHMP4BQ9H444 Y_RNA.356-201ENST00000365475 113 ntBASIC-2.41□□□□□ -2.8
CHMP4BQ9H444 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.41□□□□□ -2.8
CHMP4BQ9H444 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.41□□□□□ -2.8
CHMP4BQ9H444 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-2.41□□□□□ -2.8
CHMP4BQ9H444 Y_RNA.690-201ENST00000516603 95 ntBASIC-2.41□□□□□ -2.8
CHMP4BQ9H444 U6.96-201ENST00000636425 70 ntBASIC-2.41□□□□□ -2.8
CHMP4BQ9H444 U6atac.1-201ENST00000616025 117 ntBASIC-2.42□□□□□ -2.8
CHMP4BQ9H444 AC090617.8-201ENST00000623339 167 ntBASIC-2.42□□□□□ -2.8
CHMP4BQ9H444 SNORD42.2-201ENST00000365570 69 ntBASIC-2.43□□□□□ -2.8
CHMP4BQ9H444 MTND1P19-201ENST00000511780 315 ntBASIC-2.43□□□□□ -2.8
CHMP4BQ9H444 RNU6-75P-201ENST00000515944 104 ntBASIC-2.43□□□□□ -2.8
CHMP4BQ9H444 AC139792.2-201ENST00000624218 587 ntBASIC-2.43□□□□□ -2.8
CHMP4BQ9H444 U6.106-201ENST00000636360 105 ntBASIC-2.43□□□□□ -2.8
CHMP4BQ9H444 Y_RNA.162-201ENST00000363683 102 ntBASIC-2.44□□□□□ -2.8
CHMP4BQ9H444 SNORA26.4-201ENST00000391188 123 ntBASIC-2.44□□□□□ -2.8
CHMP4BQ9H444 RNU6-980P-201ENST00000516925 103 ntBASIC-2.44□□□□□ -2.8
CHMP4BQ9H444 MIR3139-201ENST00000579145 76 ntBASIC-2.44□□□□□ -2.8
CHMP4BQ9H444 MIR6844-201ENST00000637122 62 ntBASIC-2.44□□□□□ -2.8
CHMP4BQ9H444 MIR1207-201ENST00000408249 87 ntBASIC-2.45□□□□□ -2.8
CHMP4BQ9H444 RNU5E-3P-201ENST00000515913 68 ntBASIC-2.45□□□□□ -2.8
CHMP4BQ9H444 RNU6-988P-201ENST00000519081 107 ntBASIC-2.45□□□□□ -2.8
CHMP4BQ9H444 AP002795.1-201ENST00000534879 84 ntBASIC-2.45□□□□□ -2.8
CHMP4BQ9H444 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.45□□□□□ -2.8
CHMP4BQ9H444 RNU6-990P-201ENST00000364385 104 ntBASIC-2.46□□□□□ -2.8
CHMP4BQ9H444 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-2.46□□□□□ -2.8
CHMP4BQ9H444 MIRLET7F1-201ENST00000362202 87 ntBASIC-2.47□□□□□ -2.8
CHMP4BQ9H444 Y_RNA.75-201ENST00000362927 97 ntBASIC-2.47□□□□□ -2.8
CHMP4BQ9H444 Y_RNA.153-201ENST00000363615 91 ntBASIC-2.47□□□□□ -2.8
CHMP4BQ9H444 Y_RNA.441-201ENST00000384123 112 ntBASIC-2.47□□□□□ -2.8
CHMP4BQ9H444 RNU6-1234P-201ENST00000516877 103 ntBASIC-2.47□□□□□ -2.8
CHMP4BQ9H444 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.48□□□□□ -2.81
CHMP4BQ9H444 RNU6-495P-201ENST00000362995 107 ntBASIC-2.48□□□□□ -2.81
CHMP4BQ9H444 Y_RNA.346-201ENST00000365385 112 ntBASIC-2.48□□□□□ -2.81
CHMP4BQ9H444 RNU6-168P-201ENST00000516189 101 ntBASIC-2.48□□□□□ -2.81
CHMP4BQ9H444 Y_RNA.158-201ENST00000363651 101 ntBASIC-2.49□□□□□ -2.81
CHMP4BQ9H444 SNORD115-33-201ENST00000363723 82 ntBASIC-2.49□□□□□ -2.81
CHMP4BQ9H444 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.49□□□□□ -2.81
CHMP4BQ9H444 SNORD115-27-201ENST00000364430 82 ntBASIC-2.49□□□□□ -2.81
CHMP4BQ9H444 MIR548H3-201ENST00000408771 118 ntBASIC-2.49□□□□□ -2.81
CHMP4BQ9H444 RPL35AP4-201ENST00000412007 102 ntBASIC-2.49□□□□□ -2.81
CHMP4BQ9H444 Y_RNA.686-201ENST00000516548 134 ntBASIC-2.49□□□□□ -2.81
CHMP4BQ9H444 Y_RNA.337-201ENST00000365312 102 ntBASIC-2.5□□□□□ -2.81
CHMP4BQ9H444 RNU6-65P-201ENST00000516332 98 ntBASIC-2.5□□□□□ -2.81
CHMP4BQ9H444 RNU6-1018P-201ENST00000516577 106 ntBASIC-2.5□□□□□ -2.81
CHMP4BQ9H444 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.5□□□□□ -2.81
CHMP4BQ9H444 RNU6-1009P-201ENST00000390996 107 ntBASIC-2.51□□□□□ -2.81
CHMP4BQ9H444 AC090616.4-201ENST00000448026 115 ntBASIC-2.51□□□□□ -2.81
CHMP4BQ9H444 RNU6-875P-201ENST00000516488 106 ntBASIC-2.51□□□□□ -2.81
CHMP4BQ9H444 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-2.51□□□□□ -2.81
CHMP4BQ9H444 Y_RNA.54-201ENST00000362766 105 ntBASIC-2.52□□□□□ -2.81
CHMP4BQ9H444 RNU6-363P-201ENST00000362895 105 ntBASIC-2.52□□□□□ -2.81
CHMP4BQ9H444 Y_RNA.277-201ENST00000364754 102 ntBASIC-2.52□□□□□ -2.81
CHMP4BQ9H444 MIR4536-1-201ENST00000583537 88 ntBASIC-2.52□□□□□ -2.81
CHMP4BQ9H444 MIR4795-201ENST00000584182 89 ntBASIC-2.52□□□□□ -2.81
CHMP4BQ9H444 MIR4723-201ENST00000585070 81 ntBASIC-2.52□□□□□ -2.81
CHMP4BQ9H444 RNU6-1290P-201ENST00000362957 109 ntBASIC-2.53□□□□□ -2.81
CHMP4BQ9H444 RNY4P28-201ENST00000365281 93 ntBASIC-2.53□□□□□ -2.81
CHMP4BQ9H444 MT-TM-201ENST00000387377 68 ntBASIC-2.53□□□□□ -2.81
CHMP4BQ9H444 MIR759-201ENST00000390224 91 ntBASIC-2.53□□□□□ -2.81
CHMP4BQ9H444 Y_RNA.698-201ENST00000516798 118 ntBASIC-2.53□□□□□ -2.81
CHMP4BQ9H444 MIR3646-201ENST00000578301 84 ntBASIC-2.53□□□□□ -2.81
CHMP4BQ9H444 RNA5SP405-201ENST00000363059 114 ntBASIC-2.54□□□□□ -2.82
CHMP4BQ9H444 Y_RNA.213-201ENST00000364178 111 ntBASIC-2.54□□□□□ -2.82
CHMP4BQ9H444 RNU6-119P-201ENST00000364882 107 ntBASIC-2.54□□□□□ -2.82
CHMP4BQ9H444 Y_RNA.633-201ENST00000459107 95 ntBASIC-2.54□□□□□ -2.82
CHMP4BQ9H444 Y_RNA.352-201ENST00000365439 102 ntBASIC-2.55□□□□□ -2.82
CHMP4BQ9H444 RNU6-713P-201ENST00000384761 107 ntBASIC-2.55□□□□□ -2.82
CHMP4BQ9H444 SNORA63.2-201ENST00000362603 126 ntBASIC-2.56□□□□□ -2.82
CHMP4BQ9H444 RNU6-924P-201ENST00000362926 108 ntBASIC-2.56□□□□□ -2.82
CHMP4BQ9H444 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.56□□□□□ -2.82
CHMP4BQ9H444 Y_RNA.528-201ENST00000384575 108 ntBASIC-2.56□□□□□ -2.82
CHMP4BQ9H444 MIR4680-201ENST00000580906 66 ntBASIC-2.56□□□□□ -2.82
CHMP4BQ9H444 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-2.56□□□□□ -2.82
CHMP4BQ9H444 AL442128.1-201ENST00000615151 90 ntBASIC-2.56□□□□□ -2.82
CHMP4BQ9H444 Y_RNA.155-201ENST00000363632 101 ntBASIC-2.57□□□□□ -2.82
CHMP4BQ9H444 RNU6-409P-201ENST00000384114 104 ntBASIC-2.57□□□□□ -2.82
CHMP4BQ9H444 RNU6-474P-201ENST00000384243 107 ntBASIC-2.57□□□□□ -2.82
CHMP4BQ9H444 MIR3140-201ENST00000583685 90 ntBASIC-2.57□□□□□ -2.82
CHMP4BQ9H444 Y_RNA.198-201ENST00000364013 98 ntBASIC-2.58□□□□□ -2.82
CHMP4BQ9H444 Y_RNA.419-201ENST00000384041 102 ntBASIC-2.58□□□□□ -2.82
CHMP4BQ9H444 AC025521.1-201ENST00000621624 286 ntBASIC-2.58□□□□□ -2.82
CHMP4BQ9H444 MIR548D2-201ENST00000384955 97 ntBASIC-2.59□□□□□ -2.82
CHMP4BQ9H444 AL353691.2-201ENST00000443795 59 ntBASIC-2.59□□□□□ -2.82
CHMP4BQ9H444 Y_RNA.461-201ENST00000384263 103 ntBASIC-2.6□□□□□ -2.83
CHMP4BQ9H444 Y_RNA.483-201ENST00000384380 101 ntBASIC-2.6□□□□□ -2.83
CHMP4BQ9H444 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.6□□□□□ -2.83
CHMP4BQ9H444 SNORD127-201ENST00000458892 86 ntBASIC-2.6□□□□□ -2.83
CHMP4BQ9H444 Y_RNA.512-201ENST00000384518 102 ntBASIC-2.61□□□□□ -2.83
CHMP4BQ9H444 MIR548A1-201ENST00000385041 97 ntBASIC-2.61□□□□□ -2.83
CHMP4BQ9H444 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.61□□□□□ -2.83
CHMP4BQ9H444 RNU6-400P-201ENST00000391173 106 ntBASIC-2.61□□□□□ -2.83
CHMP4BQ9H444 RNU7-24P-201ENST00000458867 62 ntBASIC-2.61□□□□□ -2.83
Retrieved 100 of 98,524 protein–RNA pairs in 271.4 ms