Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
KRTAP4-3Q9BYR4 MIRLET7A2-201ENST00000362105 72 ntBASIC0.74□□□□□ -2.29
KRTAP4-3Q9BYR4 RNU6-230P-201ENST00000362457 104 ntBASIC0.74□□□□□ -2.29
KRTAP4-3Q9BYR4 RNU6-1277P-201ENST00000364561 107 ntBASIC0.74□□□□□ -2.29
KRTAP4-3Q9BYR4 RNU6-929P-201ENST00000384429 107 ntBASIC0.74□□□□□ -2.29
KRTAP4-3Q9BYR4 RNU6-1340P-201ENST00000384438 107 ntBASIC0.74□□□□□ -2.29
KRTAP4-3Q9BYR4 SNORA26.7-201ENST00000391288 122 ntBASIC0.74□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR1287-201ENST00000408492 90 ntBASIC0.74□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR1185-1-201ENST00000408598 86 ntBASIC0.74□□□□□ -2.29
KRTAP4-3Q9BYR4 RNA5SP484-201ENST00000458857 111 ntBASIC0.74□□□□□ -2.29
KRTAP4-3Q9BYR4 RNA5SP385-201ENST00000515947 110 ntBASIC0.74□□□□□ -2.29
KRTAP4-3Q9BYR4 RNU6-803P-201ENST00000516034 102 ntBASIC0.74□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR1273D-201ENST00000577266 86 ntBASIC0.74□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR5094-201ENST00000578766 85 ntBASIC0.74□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR5092-201ENST00000583139 88 ntBASIC0.74□□□□□ -2.29
KRTAP4-3Q9BYR4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC0.74□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR5739-201ENST00000619803 80 ntBASIC0.74□□□□□ -2.29
KRTAP4-3Q9BYR4 uc_338.16-201ENST00000621804 95 ntBASIC0.74□□□□□ -2.29
KRTAP4-3Q9BYR4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC0.74□□□□□ -2.29
KRTAP4-3Q9BYR4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC0.74□□□□□ -2.29
KRTAP4-3Q9BYR4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC0.74□□□□□ -2.29
KRTAP4-3Q9BYR4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
KRTAP4-3Q9BYR4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
KRTAP4-3Q9BYR4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
KRTAP4-3Q9BYR4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 SNORD114-1-201ENST00000362705 72 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 Y_RNA.164-201ENST00000363709 102 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 Y_RNA.355-201ENST00000365462 98 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 RNY1P8-201ENST00000383970 114 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 Y_RNA.434-201ENST00000384090 100 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 SNORA8.2-201ENST00000384372 139 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 RNA5SP181-201ENST00000410246 98 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 RN7SKP123-201ENST00000410732 291 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 snoU13.23-201ENST00000458863 104 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 snoU13.25-201ENST00000458945 104 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 RNA5SP310-201ENST00000459084 116 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 AC092185.1-201ENST00000491371 97 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 CKS1BP2-201ENST00000497342 240 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 RNU6-732P-201ENST00000516033 103 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 SCARNA17.1-201ENST00000516211 143 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 SCARNA17.2-201ENST00000516334 143 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 RNY4-201ENST00000516507 96 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 SNORA31.15-201ENST00000516771 132 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 RNU6-782P-201ENST00000516852 104 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 snoU83B.1-201ENST00000517136 88 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 AP003716.2-201ENST00000528260 108 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR4771-2-201ENST00000577758 74 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR4771-1-201ENST00000582617 74 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR5007-201ENST00000583098 95 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR8081-201ENST00000611533 95 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 SCARNA17.4-201ENST00000614296 143 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 5S_rRNA.12-201ENST00000617631 107 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 AL359920.1-201ENST00000618332 176 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 AC084768.2-201ENST00000622736 221 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 AL353746.1-201ENST00000566293 6881 ntBASIC0.73□□□□□ -2.29
KRTAP4-3Q9BYR4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC0.72□□□□□ -2.29
KRTAP4-3Q9BYR4 Y_RNA.174-201ENST00000363781 105 ntBASIC0.72□□□□□ -2.29
KRTAP4-3Q9BYR4 RNU6-726P-201ENST00000364680 107 ntBASIC0.72□□□□□ -2.29
KRTAP4-3Q9BYR4 RNA5SP160-201ENST00000364866 120 ntBASIC0.72□□□□□ -2.29
KRTAP4-3Q9BYR4 RNU6-608P-201ENST00000383927 104 ntBASIC0.72□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR489-201ENST00000384923 84 ntBASIC0.72□□□□□ -2.29
KRTAP4-3Q9BYR4 SNORA49-201ENST00000386157 136 ntBASIC0.72□□□□□ -2.29
KRTAP4-3Q9BYR4 SNORD41-201ENST00000386967 70 ntBASIC0.72□□□□□ -2.29
KRTAP4-3Q9BYR4 HMGN2P23-201ENST00000456759 269 ntBASIC0.72□□□□□ -2.29
KRTAP4-3Q9BYR4 RNU7-102P-201ENST00000458948 62 ntBASIC0.72□□□□□ -2.29
KRTAP4-3Q9BYR4 snoU13.27-201ENST00000459278 104 ntBASIC0.72□□□□□ -2.29
KRTAP4-3Q9BYR4 RNA5SP468-201ENST00000516782 93 ntBASIC0.72□□□□□ -2.29
KRTAP4-3Q9BYR4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC0.72□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR4644-201ENST00000579929 84 ntBASIC0.72□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR4464-201ENST00000580818 92 ntBASIC0.72□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR4676-201ENST00000583078 72 ntBASIC0.72□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR4473-201ENST00000583731 91 ntBASIC0.72□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR4506-201ENST00000584693 77 ntBASIC0.72□□□□□ -2.29
KRTAP4-3Q9BYR4 MIR5002-201ENST00000584713 97 ntBASIC0.72□□□□□ -2.29
KRTAP4-3Q9BYR4 TP73-AS1.1-201ENST00000611447 161 ntBASIC0.72□□□□□ -2.29
KRTAP4-3Q9BYR4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC0.72□□□□□ -2.29
KRTAP4-3Q9BYR4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.72□□□□□ -2.29
KRTAP4-3Q9BYR4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC0.72□□□□□ -2.29
KRTAP4-3Q9BYR4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC0.72□□□□□ -2.29
KRTAP4-3Q9BYR4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 RNA5SP93-201ENST00000362525 114 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU6-1233P-201ENST00000362922 102 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 RNA5SP264-201ENST00000363115 107 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 SNORD118-201ENST00000363593 134 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 SNORA7.1-201ENST00000363750 139 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU6-912P-201ENST00000363800 104 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 SNORD115-23-201ENST00000364461 82 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU6-934P-201ENST00000365154 107 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 SNORA25B-201ENST00000365507 128 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR218-1-201ENST00000384999 110 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR561-201ENST00000385216 97 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU6-695P-201ENST00000391157 104 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 SNORD19-201ENST00000391191 68 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR1254-1-201ENST00000408257 97 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR548L-201ENST00000408303 86 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR548Q-201ENST00000408404 100 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 Y_RNA.613-201ENST00000410726 97 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms