Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 RNU6-788P-201ENST00000390967 104 ntBASIC1.31□□□□□ -2.2
TRIM56Q9BRZ2 RNU6-634P-201ENST00000459134 106 ntBASIC1.31□□□□□ -2.2
TRIM56Q9BRZ2 RNA5SP102-201ENST00000516865 106 ntBASIC1.31□□□□□ -2.2
TRIM56Q9BRZ2 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.31□□□□□ -2.2
TRIM56Q9BRZ2 MIR3675-201ENST00000583661 73 ntBASIC1.31□□□□□ -2.2
TRIM56Q9BRZ2 AL078603.1-201ENST00000603824 313 ntBASIC1.31□□□□□ -2.2
TRIM56Q9BRZ2 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
TRIM56Q9BRZ2 MIR4773-1-201ENST00000637203 78 ntBASIC1.31□□□□□ -2.2
TRIM56Q9BRZ2 RNU4-45P-201ENST00000365469 141 ntBASIC1.3□□□□□ -2.2
TRIM56Q9BRZ2 RNU6-939P-201ENST00000384634 107 ntBASIC1.3□□□□□ -2.2
TRIM56Q9BRZ2 MIR3612-201ENST00000579753 87 ntBASIC1.3□□□□□ -2.2
TRIM56Q9BRZ2 MIR4452-201ENST00000583004 71 ntBASIC1.3□□□□□ -2.2
TRIM56Q9BRZ2 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.3□□□□□ -2.2
TRIM56Q9BRZ2 AL353770.2-201ENST00000620024 78 ntBASIC1.3□□□□□ -2.2
TRIM56Q9BRZ2 MIR664A-201ENST00000626086 82 ntBASIC1.3□□□□□ -2.2
TRIM56Q9BRZ2 RNU6-330P-201ENST00000363015 107 ntBASIC1.29□□□□□ -2.2
TRIM56Q9BRZ2 SNORD18A-201ENST00000363753 72 ntBASIC1.29□□□□□ -2.2
TRIM56Q9BRZ2 RNU6-1241P-201ENST00000384536 107 ntBASIC1.29□□□□□ -2.2
TRIM56Q9BRZ2 MIR519E-201ENST00000385075 84 ntBASIC1.29□□□□□ -2.2
TRIM56Q9BRZ2 SNORD41.1-201ENST00000391000 69 ntBASIC1.29□□□□□ -2.2
TRIM56Q9BRZ2 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.29□□□□□ -2.2
TRIM56Q9BRZ2 RNU6-539P-201ENST00000516665 103 ntBASIC1.28□□□□□ -2.2
TRIM56Q9BRZ2 RNU6-590P-201ENST00000365039 107 ntBASIC1.27□□□□□ -2.21
TRIM56Q9BRZ2 RNU6-382P-201ENST00000365181 106 ntBASIC1.27□□□□□ -2.21
TRIM56Q9BRZ2 SNORD75.2-201ENST00000408784 58 ntBASIC1.27□□□□□ -2.21
TRIM56Q9BRZ2 RNA5SP47-201ENST00000517230 109 ntBASIC1.27□□□□□ -2.21
TRIM56Q9BRZ2 MIR3678-201ENST00000578455 94 ntBASIC1.27□□□□□ -2.21
TRIM56Q9BRZ2 MIR4661-201ENST00000582720 75 ntBASIC1.27□□□□□ -2.21
TRIM56Q9BRZ2 MIR3660-201ENST00000584845 100 ntBASIC1.27□□□□□ -2.21
TRIM56Q9BRZ2 MIR548O2-201ENST00000616090 70 ntBASIC1.27□□□□□ -2.21
TRIM56Q9BRZ2 MIR150-201ENST00000385048 84 ntBASIC1.26□□□□□ -2.21
TRIM56Q9BRZ2 SNORA40.6-201ENST00000391153 128 ntBASIC1.26□□□□□ -2.21
TRIM56Q9BRZ2 RNU7-24P-201ENST00000458867 62 ntBASIC1.26□□□□□ -2.21
TRIM56Q9BRZ2 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.26□□□□□ -2.21
TRIM56Q9BRZ2 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.26□□□□□ -2.21
TRIM56Q9BRZ2 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.25□□□□□ -2.21
TRIM56Q9BRZ2 SNORD114-22-201ENST00000365423 72 ntBASIC1.25□□□□□ -2.21
TRIM56Q9BRZ2 RNU6-1335P-201ENST00000365426 107 ntBASIC1.25□□□□□ -2.21
TRIM56Q9BRZ2 SCARNA16.5-201ENST00000517114 183 ntBASIC1.25□□□□□ -2.21
TRIM56Q9BRZ2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.25□□□□□ -2.21
TRIM56Q9BRZ2 MIR6078-201ENST00000611069 100 ntBASIC1.25□□□□□ -2.21
TRIM56Q9BRZ2 MIR8053-201ENST00000613344 75 ntBASIC1.25□□□□□ -2.21
TRIM56Q9BRZ2 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.25□□□□□ -2.21
TRIM56Q9BRZ2 Y_RNA.258-201ENST00000364613 105 ntBASIC1.24□□□□□ -2.21
TRIM56Q9BRZ2 RNU6-726P-201ENST00000364680 107 ntBASIC1.24□□□□□ -2.21
TRIM56Q9BRZ2 AC244098.3-201ENST00000424803 96 ntBASIC1.24□□□□□ -2.21
TRIM56Q9BRZ2 RNU6-42P-201ENST00000384165 107 ntBASIC1.23□□□□□ -2.21
TRIM56Q9BRZ2 AL691482.2-201ENST00000457453 84 ntBASIC1.23□□□□□ -2.21
TRIM56Q9BRZ2 MIR6734-201ENST00000621166 68 ntBASIC1.23□□□□□ -2.21
TRIM56Q9BRZ2 RNU6-495P-201ENST00000362995 107 ntBASIC1.22□□□□□ -2.21
TRIM56Q9BRZ2 RNU6-649P-201ENST00000384463 107 ntBASIC1.22□□□□□ -2.21
TRIM56Q9BRZ2 MIR96-201ENST00000362288 78 ntBASIC1.21□□□□□ -2.22
TRIM56Q9BRZ2 RNU6-716P-201ENST00000365621 103 ntBASIC1.21□□□□□ -2.22
TRIM56Q9BRZ2 SNORD99-201ENST00000408612 74 ntBASIC1.21□□□□□ -2.22
TRIM56Q9BRZ2 RNA5SP220-201ENST00000516298 104 ntBASIC1.21□□□□□ -2.22
TRIM56Q9BRZ2 AC011195.1-201ENST00000578177 177 ntBASIC1.21□□□□□ -2.22
TRIM56Q9BRZ2 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
TRIM56Q9BRZ2 SNORD45.1-201ENST00000363181 77 ntBASIC1.2□□□□□ -2.22
TRIM56Q9BRZ2 SNORD30.1-201ENST00000391309 70 ntBASIC1.2□□□□□ -2.22
TRIM56Q9BRZ2 MIR4460-201ENST00000577862 86 ntBASIC1.2□□□□□ -2.22
TRIM56Q9BRZ2 MIR18A-201ENST00000362310 71 ntBASIC1.19□□□□□ -2.22
TRIM56Q9BRZ2 RNU6V-201ENST00000384105 107 ntBASIC1.19□□□□□ -2.22
TRIM56Q9BRZ2 RNU6-895P-201ENST00000384125 103 ntBASIC1.19□□□□□ -2.22
TRIM56Q9BRZ2 MIR7-2-201ENST00000384970 110 ntBASIC1.19□□□□□ -2.22
TRIM56Q9BRZ2 MIR1285-1-201ENST00000408593 84 ntBASIC1.19□□□□□ -2.22
TRIM56Q9BRZ2 AC093423.1-201ENST00000440817 142 ntBASIC1.19□□□□□ -2.22
TRIM56Q9BRZ2 AL353765.1-201ENST00000605514 183 ntBASIC1.19□□□□□ -2.22
TRIM56Q9BRZ2 RNU6-54P-201ENST00000365563 107 ntBASIC1.18□□□□□ -2.22
TRIM56Q9BRZ2 SNORA8.2-201ENST00000384372 139 ntBASIC1.18□□□□□ -2.22
TRIM56Q9BRZ2 RNU6-540P-201ENST00000384622 101 ntBASIC1.18□□□□□ -2.22
TRIM56Q9BRZ2 MT-TY-201ENST00000387409 66 ntBASIC1.18□□□□□ -2.22
TRIM56Q9BRZ2 RNU6-663P-201ENST00000391105 106 ntBASIC1.18□□□□□ -2.22
TRIM56Q9BRZ2 MIR6828-201ENST00000636181 60 ntBASIC1.18□□□□□ -2.22
TRIM56Q9BRZ2 SNORD114-27-201ENST00000363766 70 ntBASIC1.17□□□□□ -2.22
TRIM56Q9BRZ2 SNORD115-31-201ENST00000365318 82 ntBASIC1.17□□□□□ -2.22
TRIM56Q9BRZ2 RNU6-1039P-201ENST00000383931 107 ntBASIC1.17□□□□□ -2.22
TRIM56Q9BRZ2 RNA5SP227-201ENST00000516184 113 ntBASIC1.17□□□□□ -2.22
TRIM56Q9BRZ2 RNU1-141P-201ENST00000364623 158 ntBASIC1.16□□□□□ -2.22
TRIM56Q9BRZ2 Y_RNA.540-201ENST00000384638 111 ntBASIC1.16□□□□□ -2.22
TRIM56Q9BRZ2 RNU6-604P-201ENST00000390917 100 ntBASIC1.16□□□□□ -2.22
TRIM56Q9BRZ2 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.16□□□□□ -2.22
TRIM56Q9BRZ2 NAMPTP3-201ENST00000569273 224 ntBASIC1.16□□□□□ -2.22
TRIM56Q9BRZ2 MIR6509-201ENST00000614603 85 ntBASIC1.16□□□□□ -2.22
TRIM56Q9BRZ2 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.15□□□□□ -2.23
TRIM56Q9BRZ2 RNU6-881P-201ENST00000516813 102 ntBASIC1.15□□□□□ -2.23
TRIM56Q9BRZ2 AL162376.1-201ENST00000624117 175 ntBASIC1.15□□□□□ -2.23
TRIM56Q9BRZ2 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.15□□□□□ -2.23
TRIM56Q9BRZ2 RNU6-269P-201ENST00000391077 97 ntBASIC1.14□□□□□ -2.23
TRIM56Q9BRZ2 AC073869.9-201ENST00000641610 120 ntBASIC1.14□□□□□ -2.23
TRIM56Q9BRZ2 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
TRIM56Q9BRZ2 SNORD114-4-201ENST00000363962 75 ntBASIC1.13□□□□□ -2.23
TRIM56Q9BRZ2 SNORD115-22-201ENST00000364456 82 ntBASIC1.13□□□□□ -2.23
TRIM56Q9BRZ2 RNU1-93P-201ENST00000364704 169 ntBASIC1.13□□□□□ -2.23
TRIM56Q9BRZ2 SNORD45A-201ENST00000384512 84 ntBASIC1.13□□□□□ -2.23
TRIM56Q9BRZ2 MIR520E-201ENST00000384867 87 ntBASIC1.13□□□□□ -2.23
TRIM56Q9BRZ2 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.13□□□□□ -2.23
TRIM56Q9BRZ2 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.13□□□□□ -2.23
TRIM56Q9BRZ2 RNA5SP480-201ENST00000516840 109 ntBASIC1.13□□□□□ -2.23
TRIM56Q9BRZ2 AC069503.3-201ENST00000618674 145 ntBASIC1.13□□□□□ -2.23
TRIM56Q9BRZ2 U6.111-201ENST00000636093 83 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 182.3 ms