Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 MIR7974-201ENST00000615835 79 ntBASIC1.21□□□□□ -2.22
PTPN18Q99952 Y_RNA.32-201ENST00000362589 110 ntBASIC1.2□□□□□ -2.22
PTPN18Q99952 SNORD114-24-201ENST00000365029 72 ntBASIC1.2□□□□□ -2.22
PTPN18Q99952 MIR520F-201ENST00000384824 87 ntBASIC1.2□□□□□ -2.22
PTPN18Q99952 MIR19B1-201ENST00000384829 87 ntBASIC1.2□□□□□ -2.22
PTPN18Q99952 SNORD124-201ENST00000459577 104 ntBASIC1.2□□□□□ -2.22
PTPN18Q99952 RNU6-871P-201ENST00000516122 100 ntBASIC1.2□□□□□ -2.22
PTPN18Q99952 MIR451A-201ENST00000385059 72 ntBASIC1.19□□□□□ -2.22
PTPN18Q99952 RNU6-70P-201ENST00000516438 60 ntBASIC1.19□□□□□ -2.22
PTPN18Q99952 RNU6-135P-201ENST00000516769 101 ntBASIC1.19□□□□□ -2.22
PTPN18Q99952 RNU6-1015P-201ENST00000517121 99 ntBASIC1.19□□□□□ -2.22
PTPN18Q99952 U6.81-201ENST00000612550 106 ntBASIC1.19□□□□□ -2.22
PTPN18Q99952 AL136317.1-201ENST00000612653 226 ntBASIC1.19□□□□□ -2.22
PTPN18Q99952 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.19□□□□□ -2.22
PTPN18Q99952 RNU6-590P-201ENST00000365039 107 ntBASIC1.18□□□□□ -2.22
PTPN18Q99952 MIR216A-201ENST00000385063 110 ntBASIC1.18□□□□□ -2.22
PTPN18Q99952 SNORD89-201ENST00000390981 114 ntBASIC1.18□□□□□ -2.22
PTPN18Q99952 RNU6-634P-201ENST00000459134 106 ntBASIC1.18□□□□□ -2.22
PTPN18Q99952 U7.7-201ENST00000459276 60 ntBASIC1.18□□□□□ -2.22
PTPN18Q99952 AC002350.1-201ENST00000490759 375 ntBASIC1.18□□□□□ -2.22
PTPN18Q99952 RNU6-539P-201ENST00000516665 103 ntBASIC1.18□□□□□ -2.22
PTPN18Q99952 MIR4484-201ENST00000582855 83 ntBASIC1.18□□□□□ -2.22
PTPN18Q99952 Y_RNA.30-201ENST00000362572 97 ntBASIC1.17□□□□□ -2.22
PTPN18Q99952 RNU1-124P-201ENST00000363861 145 ntBASIC1.17□□□□□ -2.22
PTPN18Q99952 RNU4-38P-201ENST00000364472 129 ntBASIC1.17□□□□□ -2.22
PTPN18Q99952 RNU6-154P-201ENST00000384306 106 ntBASIC1.17□□□□□ -2.22
PTPN18Q99952 MIR216B-201ENST00000390186 82 ntBASIC1.17□□□□□ -2.22
PTPN18Q99952 RNU7-13P-201ENST00000516413 62 ntBASIC1.17□□□□□ -2.22
PTPN18Q99952 RNU6-1057P-201ENST00000517162 102 ntBASIC1.17□□□□□ -2.22
PTPN18Q99952 RNU7-161P-201ENST00000517289 62 ntBASIC1.17□□□□□ -2.22
PTPN18Q99952 MIR3920-201ENST00000581751 86 ntBASIC1.17□□□□□ -2.22
PTPN18Q99952 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
PTPN18Q99952 SNORD115-24-201ENST00000363528 82 ntBASIC1.16□□□□□ -2.22
PTPN18Q99952 RNU6-1126P-201ENST00000384002 107 ntBASIC1.16□□□□□ -2.22
PTPN18Q99952 MIR532-201ENST00000385025 91 ntBASIC1.16□□□□□ -2.22
PTPN18Q99952 RNU6-587P-201ENST00000391282 106 ntBASIC1.16□□□□□ -2.22
PTPN18Q99952 RNU6-824P-201ENST00000363724 104 ntBASIC1.15□□□□□ -2.23
PTPN18Q99952 MIR2113-201ENST00000459007 91 ntBASIC1.15□□□□□ -2.23
PTPN18Q99952 MIR548AG2-201ENST00000581228 64 ntBASIC1.15□□□□□ -2.23
PTPN18Q99952 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
PTPN18Q99952 Y_RNA.371-201ENST00000365591 113 ntBASIC1.14□□□□□ -2.23
PTPN18Q99952 MIR617-201ENST00000385030 97 ntBASIC1.14□□□□□ -2.23
PTPN18Q99952 RNU6-1177P-201ENST00000391058 104 ntBASIC1.14□□□□□ -2.23
PTPN18Q99952 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.14□□□□□ -2.23
PTPN18Q99952 MIR4639-201ENST00000584938 69 ntBASIC1.14□□□□□ -2.23
PTPN18Q99952 MIR6857-201ENST00000613267 93 ntBASIC1.14□□□□□ -2.23
PTPN18Q99952 RNA5SP117-201ENST00000365294 118 ntBASIC1.13□□□□□ -2.23
PTPN18Q99952 SNORA8.1-201ENST00000384250 140 ntBASIC1.13□□□□□ -2.23
PTPN18Q99952 SNORD105-201ENST00000386910 85 ntBASIC1.13□□□□□ -2.23
PTPN18Q99952 RNU7-24P-201ENST00000458867 62 ntBASIC1.13□□□□□ -2.23
PTPN18Q99952 MIR3675-201ENST00000583661 73 ntBASIC1.13□□□□□ -2.23
PTPN18Q99952 RNU6-330P-201ENST00000363015 107 ntBASIC1.12□□□□□ -2.23
PTPN18Q99952 RNU6-1241P-201ENST00000384536 107 ntBASIC1.12□□□□□ -2.23
PTPN18Q99952 SNORD41.1-201ENST00000391000 69 ntBASIC1.12□□□□□ -2.23
PTPN18Q99952 RNU6-1052P-201ENST00000411398 104 ntBASIC1.12□□□□□ -2.23
PTPN18Q99952 RNU6-752P-201ENST00000516376 102 ntBASIC1.12□□□□□ -2.23
PTPN18Q99952 RNU6-719P-201ENST00000516671 104 ntBASIC1.12□□□□□ -2.23
PTPN18Q99952 MIR4698-201ENST00000577795 80 ntBASIC1.12□□□□□ -2.23
PTPN18Q99952 MIR664A-201ENST00000626086 82 ntBASIC1.12□□□□□ -2.23
PTPN18Q99952 SNORD28-201ENST00000384706 75 ntBASIC1.11□□□□□ -2.23
PTPN18Q99952 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
PTPN18Q99952 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.11□□□□□ -2.23
PTPN18Q99952 AC067863.3-201ENST00000624172 122 ntBASIC1.11□□□□□ -2.23
PTPN18Q99952 RNU7-74P-201ENST00000459104 62 ntBASIC1.1□□□□□ -2.23
PTPN18Q99952 MIR4714-201ENST00000580728 77 ntBASIC1.1□□□□□ -2.23
PTPN18Q99952 MIR4661-201ENST00000582720 75 ntBASIC1.1□□□□□ -2.23
PTPN18Q99952 MIR548O2-201ENST00000616090 70 ntBASIC1.1□□□□□ -2.23
PTPN18Q99952 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.1□□□□□ -2.23
PTPN18Q99952 RNU6-540P-201ENST00000384622 101 ntBASIC1.09□□□□□ -2.23
PTPN18Q99952 MIR519E-201ENST00000385075 84 ntBASIC1.09□□□□□ -2.23
PTPN18Q99952 AC025627.3-201ENST00000582078 182 ntBASIC1.09□□□□□ -2.23
PTPN18Q99952 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.09□□□□□ -2.23
PTPN18Q99952 RNU6-495P-201ENST00000362995 107 ntBASIC1.08□□□□□ -2.24
PTPN18Q99952 Y_RNA.258-201ENST00000364613 105 ntBASIC1.08□□□□□ -2.24
PTPN18Q99952 MIR644A-201ENST00000385262 94 ntBASIC1.08□□□□□ -2.24
PTPN18Q99952 SNORD75.2-201ENST00000408784 58 ntBASIC1.08□□□□□ -2.24
PTPN18Q99952 AC093423.1-201ENST00000440817 142 ntBASIC1.08□□□□□ -2.24
PTPN18Q99952 RNA5SP47-201ENST00000517230 109 ntBASIC1.08□□□□□ -2.24
PTPN18Q99952 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
PTPN18Q99952 RNU6-382P-201ENST00000365181 106 ntBASIC1.07□□□□□ -2.24
PTPN18Q99952 MIR1285-1-201ENST00000408593 84 ntBASIC1.07□□□□□ -2.24
PTPN18Q99952 RNU7-104P-201ENST00000459398 79 ntBASIC1.07□□□□□ -2.24
PTPN18Q99952 MIR8053-201ENST00000613344 75 ntBASIC1.07□□□□□ -2.24
PTPN18Q99952 AC244669.1-204ENST00000621564 178 ntBASIC1.07□□□□□ -2.24
PTPN18Q99952 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
PTPN18Q99952 SNORD18A-201ENST00000363753 72 ntBASIC1.06□□□□□ -2.24
PTPN18Q99952 MIR573-201ENST00000384964 99 ntBASIC1.06□□□□□ -2.24
PTPN18Q99952 MIR154-201ENST00000385243 84 ntBASIC1.06□□□□□ -2.24
PTPN18Q99952 RNU6-274P-201ENST00000459566 107 ntBASIC1.06□□□□□ -2.24
PTPN18Q99952 OR2A41P-201ENST00000473586 105 ntBASIC1.06□□□□□ -2.24
PTPN18Q99952 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.06□□□□□ -2.24
PTPN18Q99952 RNU6-469P-201ENST00000516253 101 ntBASIC1.06□□□□□ -2.24
PTPN18Q99952 RNA5SP255-201ENST00000516370 107 ntBASIC1.06□□□□□ -2.24
PTPN18Q99952 RNU6-726P-201ENST00000364680 107 ntBASIC1.05□□□□□ -2.24
PTPN18Q99952 SNORD115-31-201ENST00000365318 82 ntBASIC1.05□□□□□ -2.24
PTPN18Q99952 RNU6-649P-201ENST00000384463 107 ntBASIC1.05□□□□□ -2.24
PTPN18Q99952 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.05□□□□□ -2.24
PTPN18Q99952 Y_RNA.386-201ENST00000383913 105 ntBASIC1.04□□□□□ -2.24
PTPN18Q99952 MIR3678-201ENST00000578455 94 ntBASIC1.04□□□□□ -2.24
PTPN18Q99952 MIR6828-201ENST00000636181 60 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms