Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.52□□□□□ -2.49
SSX3Q99909 SNORD50.2-201ENST00000365465 70 ntBASIC-0.53□□□□□ -2.49
SSX3Q99909 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.53□□□□□ -2.49
SSX3Q99909 MIR548A3-201ENST00000385297 97 ntBASIC-0.53□□□□□ -2.49
SSX3Q99909 RNU6-75P-201ENST00000515944 104 ntBASIC-0.53□□□□□ -2.49
SSX3Q99909 SNORD33.1-201ENST00000516213 88 ntBASIC-0.53□□□□□ -2.49
SSX3Q99909 MIR5009-201ENST00000578736 100 ntBASIC-0.53□□□□□ -2.49
SSX3Q99909 U6.95-201ENST00000636931 70 ntBASIC-0.53□□□□□ -2.49
SSX3Q99909 RNA5SP275-201ENST00000363936 118 ntBASIC-0.54□□□□□ -2.5
SSX3Q99909 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.54□□□□□ -2.5
SSX3Q99909 AL513043.2-201ENST00000573941 143 ntBASIC-0.54□□□□□ -2.5
SSX3Q99909 RNU6-455P-201ENST00000384681 107 ntBASIC-0.55□□□□□ -2.5
SSX3Q99909 U3.27-201ENST00000391237 200 ntBASIC-0.55□□□□□ -2.5
SSX3Q99909 MIR3613-201ENST00000579844 87 ntBASIC-0.55□□□□□ -2.5
SSX3Q99909 MIR604-201ENST00000384880 94 ntBASIC-0.56□□□□□ -2.5
SSX3Q99909 AC096531.1-201ENST00000419107 107 ntBASIC-0.56□□□□□ -2.5
SSX3Q99909 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.56□□□□□ -2.5
SSX3Q99909 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.56□□□□□ -2.5
SSX3Q99909 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.57□□□□□ -2.5
SSX3Q99909 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.57□□□□□ -2.5
SSX3Q99909 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.57□□□□□ -2.5
SSX3Q99909 SNORD14C-201ENST00000365382 88 ntBASIC-0.57□□□□□ -2.5
SSX3Q99909 RNA5SP451-201ENST00000410588 110 ntBASIC-0.57□□□□□ -2.5
SSX3Q99909 Z95118.1-201ENST00000421372 247 ntBASIC-0.57□□□□□ -2.5
SSX3Q99909 RNU6-758P-201ENST00000516292 89 ntBASIC-0.57□□□□□ -2.5
SSX3Q99909 RNU6-659P-201ENST00000516454 104 ntBASIC-0.57□□□□□ -2.5
SSX3Q99909 AP000676.1-201ENST00000533307 52 ntBASIC-0.57□□□□□ -2.5
SSX3Q99909 AL590491.3-201ENST00000610731 82 ntBASIC-0.57□□□□□ -2.5
SSX3Q99909 SNORD114-4-201ENST00000363962 75 ntBASIC-0.58□□□□□ -2.5
SSX3Q99909 RNU6-54P-201ENST00000365563 107 ntBASIC-0.58□□□□□ -2.5
SSX3Q99909 RNU6-813P-201ENST00000384691 107 ntBASIC-0.58□□□□□ -2.5
SSX3Q99909 RNU6-762P-201ENST00000517107 102 ntBASIC-0.58□□□□□ -2.5
SSX3Q99909 MIR6086-201ENST00000638065 55 ntBASIC-0.58□□□□□ -2.5
SSX3Q99909 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.59□□□□□ -2.5
SSX3Q99909 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.59□□□□□ -2.5
SSX3Q99909 RNU4-36P-201ENST00000364294 144 ntBASIC-0.59□□□□□ -2.5
SSX3Q99909 RNU6-644P-201ENST00000391155 98 ntBASIC-0.59□□□□□ -2.5
SSX3Q99909 RNU7-85P-201ENST00000458851 63 ntBASIC-0.59□□□□□ -2.5
SSX3Q99909 SNORD126-201ENST00000459475 77 ntBASIC-0.59□□□□□ -2.5
SSX3Q99909 AC103810.7-201ENST00000607821 91 ntBASIC-0.59□□□□□ -2.5
SSX3Q99909 RNU6-209P-201ENST00000384118 107 ntBASIC-0.6□□□□□ -2.51
SSX3Q99909 SNORD2-201ENST00000459163 69 ntBASIC-0.6□□□□□ -2.51
SSX3Q99909 FGF7P7-201ENST00000514120 227 ntBASIC-0.6□□□□□ -2.51
SSX3Q99909 RNA5SP66-201ENST00000517178 101 ntBASIC-0.6□□□□□ -2.51
SSX3Q99909 MIR3671-201ENST00000580455 88 ntBASIC-0.6□□□□□ -2.51
SSX3Q99909 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.61□□□□□ -2.51
SSX3Q99909 MIR548U-201ENST00000390728 81 ntBASIC-0.61□□□□□ -2.51
SSX3Q99909 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.61□□□□□ -2.51
SSX3Q99909 RNU6-719P-201ENST00000516671 104 ntBASIC-0.61□□□□□ -2.51
SSX3Q99909 SNORD114-11-201ENST00000363738 75 ntBASIC-0.62□□□□□ -2.51
SSX3Q99909 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.62□□□□□ -2.51
SSX3Q99909 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.62□□□□□ -2.51
SSX3Q99909 AC108676.2-201ENST00000605225 163 ntBASIC-0.62□□□□□ -2.51
SSX3Q99909 RNA5SP368-201ENST00000364298 116 ntBASIC-0.63□□□□□ -2.51
SSX3Q99909 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.63□□□□□ -2.51
SSX3Q99909 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.63□□□□□ -2.51
SSX3Q99909 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.63□□□□□ -2.51
SSX3Q99909 SNORA32.3-201ENST00000384772 121 ntBASIC-0.63□□□□□ -2.51
SSX3Q99909 MIR9-2-201ENST00000384838 87 ntBASIC-0.63□□□□□ -2.51
SSX3Q99909 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.63□□□□□ -2.51
SSX3Q99909 RNU6-412P-201ENST00000516434 106 ntBASIC-0.63□□□□□ -2.51
SSX3Q99909 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.63□□□□□ -2.51
SSX3Q99909 MIR3668-201ENST00000582138 75 ntBASIC-0.63□□□□□ -2.51
SSX3Q99909 SNORD115-25-201ENST00000362619 82 ntBASIC-0.64□□□□□ -2.51
SSX3Q99909 RNU6-132P-201ENST00000383863 107 ntBASIC-0.64□□□□□ -2.51
SSX3Q99909 SNORD116-14-201ENST00000383894 92 ntBASIC-0.64□□□□□ -2.51
SSX3Q99909 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.64□□□□□ -2.51
SSX3Q99909 SNORD116-17-201ENST00000383929 92 ntBASIC-0.64□□□□□ -2.51
SSX3Q99909 SNORD116-15-201ENST00000384445 92 ntBASIC-0.64□□□□□ -2.51
SSX3Q99909 RNU6-900P-201ENST00000384498 102 ntBASIC-0.64□□□□□ -2.51
SSX3Q99909 RNU6-880P-201ENST00000384526 107 ntBASIC-0.64□□□□□ -2.51
SSX3Q99909 RNU6-901P-201ENST00000384593 106 ntBASIC-0.64□□□□□ -2.51
SSX3Q99909 SNORD116-19-201ENST00000384729 92 ntBASIC-0.64□□□□□ -2.51
SSX3Q99909 RNA5SP25-201ENST00000410815 110 ntBASIC-0.64□□□□□ -2.51
SSX3Q99909 RNA5SP476-201ENST00000516613 103 ntBASIC-0.64□□□□□ -2.51
SSX3Q99909 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.64□□□□□ -2.51
SSX3Q99909 SNORD95.1-201ENST00000364099 68 ntBASIC-0.65□□□□□ -2.51
SSX3Q99909 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.65□□□□□ -2.51
SSX3Q99909 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.65□□□□□ -2.51
SSX3Q99909 RNU6-795P-201ENST00000516323 103 ntBASIC-0.65□□□□□ -2.51
SSX3Q99909 MIR3133-201ENST00000583157 78 ntBASIC-0.65□□□□□ -2.51
SSX3Q99909 SNORD116-21-201ENST00000384507 92 ntBASIC-0.66□□□□□ -2.52
SSX3Q99909 SNORA49-201ENST00000386157 136 ntBASIC-0.66□□□□□ -2.52
SSX3Q99909 MIR548I1-201ENST00000408810 149 ntBASIC-0.66□□□□□ -2.52
SSX3Q99909 RNU6-519P-201ENST00000410590 108 ntBASIC-0.66□□□□□ -2.52
SSX3Q99909 AC114755.3-201ENST00000481111 251 ntBASIC-0.66□□□□□ -2.52
SSX3Q99909 MIR3064-201ENST00000581130 66 ntBASIC-0.66□□□□□ -2.52
SSX3Q99909 MIR4777-201ENST00000583710 86 ntBASIC-0.66□□□□□ -2.52
SSX3Q99909 AC093726.3-201ENST00000637588 150 ntBASIC-0.66□□□□□ -2.52
SSX3Q99909 SNORA63.2-201ENST00000362603 126 ntBASIC-0.67□□□□□ -2.52
SSX3Q99909 MIR196A2-201ENST00000385189 110 ntBASIC-0.67□□□□□ -2.52
SSX3Q99909 MIR548E-201ENST00000408287 88 ntBASIC-0.67□□□□□ -2.52
SSX3Q99909 AL445193.1-201ENST00000441183 141 ntBASIC-0.67□□□□□ -2.52
SSX3Q99909 SNORD42B-201ENST00000458893 67 ntBASIC-0.67□□□□□ -2.52
SSX3Q99909 SNORD4B-201ENST00000459083 72 ntBASIC-0.67□□□□□ -2.52
SSX3Q99909 MIR548Z-201ENST00000584743 97 ntBASIC-0.67□□□□□ -2.52
SSX3Q99909 AC104996.3-201ENST00000590718 94 ntBASIC-0.67□□□□□ -2.52
SSX3Q99909 MIR548AZ-201ENST00000616567 95 ntBASIC-0.67□□□□□ -2.52
SSX3Q99909 RNU6-704P-201ENST00000364162 103 ntBASIC-0.68□□□□□ -2.52
SSX3Q99909 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.68□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms