Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 MIR9-3-201ENST00000385084 90 ntBASIC2.23□□□□□ -2.05
MS4A4AQ96JQ5 RNA5SP489-201ENST00000410986 109 ntBASIC2.23□□□□□ -2.05
MS4A4AQ96JQ5 AL157398.1-201ENST00000452981 186 ntBASIC2.23□□□□□ -2.05
MS4A4AQ96JQ5 SNORA40.17-201ENST00000517256 115 ntBASIC2.23□□□□□ -2.05
MS4A4AQ96JQ5 uc_338.10-201ENST00000621872 182 ntBASIC2.23□□□□□ -2.05
MS4A4AQ96JQ5 Y_RNA.355-201ENST00000365462 98 ntBASIC2.22□□□□□ -2.05
MS4A4AQ96JQ5 RNU6-520P-201ENST00000384717 104 ntBASIC2.22□□□□□ -2.05
MS4A4AQ96JQ5 MIR517B-201ENST00000385102 67 ntBASIC2.22□□□□□ -2.05
MS4A4AQ96JQ5 SNORA25.15-201ENST00000516487 89 ntBASIC2.21□□□□□ -2.06
MS4A4AQ96JQ5 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC2.21□□□□□ -2.06
MS4A4AQ96JQ5 MIR499A-201ENST00000384903 122 ntBASIC2.2□□□□□ -2.06
MS4A4AQ96JQ5 AL356379.1-201ENST00000414105 126 ntBASIC2.2□□□□□ -2.06
MS4A4AQ96JQ5 AC104435.1-201ENST00000483483 166 ntBASIC2.2□□□□□ -2.06
MS4A4AQ96JQ5 RNU1-40P-201ENST00000516816 164 ntBASIC2.2□□□□□ -2.06
MS4A4AQ96JQ5 RNU1-97P-201ENST00000516872 164 ntBASIC2.2□□□□□ -2.06
MS4A4AQ96JQ5 RNA5SP402-201ENST00000517148 110 ntBASIC2.2□□□□□ -2.06
MS4A4AQ96JQ5 AC084768.2-201ENST00000622736 221 ntBASIC2.2□□□□□ -2.06
MS4A4AQ96JQ5 RNU6-698P-201ENST00000363523 107 ntBASIC2.19□□□□□ -2.06
MS4A4AQ96JQ5 RNU6-726P-201ENST00000364680 107 ntBASIC2.19□□□□□ -2.06
MS4A4AQ96JQ5 RNU6-34P-201ENST00000364874 107 ntBASIC2.19□□□□□ -2.06
MS4A4AQ96JQ5 SNORA8.2-201ENST00000384372 139 ntBASIC2.19□□□□□ -2.06
MS4A4AQ96JQ5 MIR630-201ENST00000384957 97 ntBASIC2.19□□□□□ -2.06
MS4A4AQ96JQ5 AC079804.2-201ENST00000490376 200 ntBASIC2.19□□□□□ -2.06
MS4A4AQ96JQ5 RNU6-1110P-201ENST00000516462 101 ntBASIC2.19□□□□□ -2.06
MS4A4AQ96JQ5 MIR8081-201ENST00000611533 95 ntBASIC2.19□□□□□ -2.06
MS4A4AQ96JQ5 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.19□□□□□ -2.06
MS4A4AQ96JQ5 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
MS4A4AQ96JQ5 SNORD113-4-201ENST00000364802 75 ntBASIC2.18□□□□□ -2.06
MS4A4AQ96JQ5 SNORA75.1-201ENST00000391130 148 ntBASIC2.18□□□□□ -2.06
MS4A4AQ96JQ5 TRMT112P2-201ENST00000512910 132 ntBASIC2.18□□□□□ -2.06
MS4A4AQ96JQ5 MIR4303-201ENST00000581299 66 ntBASIC2.18□□□□□ -2.06
MS4A4AQ96JQ5 AL096840.1-201ENST00000603287 93 ntBASIC2.18□□□□□ -2.06
MS4A4AQ96JQ5 MIR222-201ENST00000384992 110 ntBASIC2.17□□□□□ -2.06
MS4A4AQ96JQ5 AC021146.9-201ENST00000512503 156 ntBASIC2.17□□□□□ -2.06
MS4A4AQ96JQ5 MIR4255-201ENST00000579351 72 ntBASIC2.17□□□□□ -2.06
MS4A4AQ96JQ5 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.17□□□□□ -2.06
MS4A4AQ96JQ5 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
MS4A4AQ96JQ5 RNA5SP47-201ENST00000517230 109 ntBASIC2.16□□□□□ -2.06
MS4A4AQ96JQ5 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
MS4A4AQ96JQ5 Y_RNA.118-201ENST00000363300 101 ntBASIC2.15□□□□□ -2.07
MS4A4AQ96JQ5 MIR676-201ENST00000390702 67 ntBASIC2.15□□□□□ -2.07
MS4A4AQ96JQ5 SNORA67.5-201ENST00000391036 107 ntBASIC2.15□□□□□ -2.07
MS4A4AQ96JQ5 FABP5P4-201ENST00000437203 171 ntBASIC2.15□□□□□ -2.07
MS4A4AQ96JQ5 AL049779.4-201ENST00000604500 156 ntBASIC2.15□□□□□ -2.07
MS4A4AQ96JQ5 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC2.14□□□□□ -2.07
MS4A4AQ96JQ5 SNORD18A-201ENST00000363753 72 ntBASIC2.14□□□□□ -2.07
MS4A4AQ96JQ5 MIR758-201ENST00000390227 88 ntBASIC2.14□□□□□ -2.07
MS4A4AQ96JQ5 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
MS4A4AQ96JQ5 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
MS4A4AQ96JQ5 RNU6-716P-201ENST00000365621 103 ntBASIC2.13□□□□□ -2.07
MS4A4AQ96JQ5 SNORD105-201ENST00000386910 85 ntBASIC2.13□□□□□ -2.07
MS4A4AQ96JQ5 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC2.13□□□□□ -2.07
MS4A4AQ96JQ5 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
MS4A4AQ96JQ5 AC002429.1-201ENST00000437672 148 ntBASIC2.12□□□□□ -2.07
MS4A4AQ96JQ5 U7.7-201ENST00000459276 60 ntBASIC2.12□□□□□ -2.07
MS4A4AQ96JQ5 RNU7-119P-201ENST00000459279 63 ntBASIC2.12□□□□□ -2.07
MS4A4AQ96JQ5 RNU7-174P-201ENST00000516248 59 ntBASIC2.12□□□□□ -2.07
MS4A4AQ96JQ5 RNA5SP82-201ENST00000516707 92 ntBASIC2.12□□□□□ -2.07
MS4A4AQ96JQ5 RNU5B-6P-201ENST00000516765 68 ntBASIC2.12□□□□□ -2.07
MS4A4AQ96JQ5 MIR6840-201ENST00000611937 71 ntBASIC2.12□□□□□ -2.07
MS4A4AQ96JQ5 MIR6895-201ENST00000613497 78 ntBASIC2.12□□□□□ -2.07
MS4A4AQ96JQ5 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC2.12□□□□□ -2.07
MS4A4AQ96JQ5 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
MS4A4AQ96JQ5 RNA5SP160-201ENST00000364866 120 ntBASIC2.11□□□□□ -2.07
MS4A4AQ96JQ5 U2.7-201ENST00000619197 100 ntBASIC2.11□□□□□ -2.07
MS4A4AQ96JQ5 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
MS4A4AQ96JQ5 MIRLET7G-201ENST00000362280 84 ntBASIC2.1□□□□□ -2.07
MS4A4AQ96JQ5 Y_RNA.379-201ENST00000365653 102 ntBASIC2.1□□□□□ -2.07
MS4A4AQ96JQ5 SNORD89-201ENST00000390981 114 ntBASIC2.1□□□□□ -2.07
MS4A4AQ96JQ5 RNU6-269P-201ENST00000391077 97 ntBASIC2.1□□□□□ -2.07
MS4A4AQ96JQ5 SCARNA16.5-201ENST00000517114 183 ntBASIC2.1□□□□□ -2.07
MS4A4AQ96JQ5 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
MS4A4AQ96JQ5 MIR489-201ENST00000384923 84 ntBASIC2.09□□□□□ -2.07
MS4A4AQ96JQ5 RNU7-95P-201ENST00000459222 64 ntBASIC2.09□□□□□ -2.07
MS4A4AQ96JQ5 RNU1-92P-201ENST00000517017 135 ntBASIC2.09□□□□□ -2.07
MS4A4AQ96JQ5 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
MS4A4AQ96JQ5 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
MS4A4AQ96JQ5 RNU6-1312P-201ENST00000362425 108 ntBASIC2.08□□□□□ -2.08
MS4A4AQ96JQ5 SNORA63.6-201ENST00000364921 119 ntBASIC2.08□□□□□ -2.08
MS4A4AQ96JQ5 snoU13.13-201ENST00000458842 104 ntBASIC2.08□□□□□ -2.08
MS4A4AQ96JQ5 Y_RNA.407-201ENST00000383986 113 ntBASIC2.07□□□□□ -2.08
MS4A4AQ96JQ5 SCARNA17.3-201ENST00000516381 125 ntBASIC2.07□□□□□ -2.08
MS4A4AQ96JQ5 MIR3678-201ENST00000578455 94 ntBASIC2.07□□□□□ -2.08
MS4A4AQ96JQ5 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.07□□□□□ -2.08
MS4A4AQ96JQ5 Y_RNA.125-201ENST00000363371 111 ntBASIC2.06□□□□□ -2.08
MS4A4AQ96JQ5 RNA5SP484-201ENST00000458857 111 ntBASIC2.06□□□□□ -2.08
MS4A4AQ96JQ5 Y_RNA.633-201ENST00000459107 95 ntBASIC2.06□□□□□ -2.08
MS4A4AQ96JQ5 MIR144-201ENST00000384886 86 ntBASIC2.05□□□□□ -2.08
MS4A4AQ96JQ5 MIR517C-201ENST00000385103 95 ntBASIC2.05□□□□□ -2.08
MS4A4AQ96JQ5 BX248123.2-201ENST00000606318 124 ntBASIC2.05□□□□□ -2.08
MS4A4AQ96JQ5 SNORA25-201ENST00000384384 134 ntBASIC2.04□□□□□ -2.08
MS4A4AQ96JQ5 RNU6ATAC29P-201ENST00000408088 125 ntBASIC2.04□□□□□ -2.08
MS4A4AQ96JQ5 MIR5694-201ENST00000581190 76 ntBASIC2.04□□□□□ -2.08
MS4A4AQ96JQ5 MIR502-201ENST00000606349 86 ntBASIC2.04□□□□□ -2.08
MS4A4AQ96JQ5 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
MS4A4AQ96JQ5 U4.4-201ENST00000620626 117 ntBASIC2.03□□□□□ -2.08
MS4A4AQ96JQ5 AL162376.1-201ENST00000624117 175 ntBASIC2.03□□□□□ -2.08
MS4A4AQ96JQ5 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
MS4A4AQ96JQ5 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
MS4A4AQ96JQ5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 201.4 ms