Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 MIR548O2-201ENST00000616090 70 ntBASIC1.47□□□□□ -2.17
IFT43Q96FT9 RNU6-495P-201ENST00000362995 107 ntBASIC1.46□□□□□ -2.18
IFT43Q96FT9 Y_RNA.226-201ENST00000364337 114 ntBASIC1.46□□□□□ -2.18
IFT43Q96FT9 Y_RNA.386-201ENST00000383913 105 ntBASIC1.46□□□□□ -2.18
IFT43Q96FT9 AC025627.3-201ENST00000582078 182 ntBASIC1.46□□□□□ -2.18
IFT43Q96FT9 AC244669.1-204ENST00000621564 178 ntBASIC1.46□□□□□ -2.18
IFT43Q96FT9 SNORD115-22-201ENST00000364456 82 ntBASIC1.45□□□□□ -2.18
IFT43Q96FT9 SNORA25.8-201ENST00000364831 128 ntBASIC1.45□□□□□ -2.18
IFT43Q96FT9 Y_RNA.327-201ENST00000365201 102 ntBASIC1.45□□□□□ -2.18
IFT43Q96FT9 SNORD41.1-201ENST00000391000 69 ntBASIC1.45□□□□□ -2.18
IFT43Q96FT9 MIR26B-201ENST00000362251 77 ntBASIC1.44□□□□□ -2.18
IFT43Q96FT9 SNORD114-24-201ENST00000365029 72 ntBASIC1.44□□□□□ -2.18
IFT43Q96FT9 SNORD45A-201ENST00000384512 84 ntBASIC1.44□□□□□ -2.18
IFT43Q96FT9 RNU6-881P-201ENST00000516813 102 ntBASIC1.44□□□□□ -2.18
IFT43Q96FT9 RNU1-92P-201ENST00000517017 135 ntBASIC1.44□□□□□ -2.18
IFT43Q96FT9 RNA5SP404-201ENST00000517118 132 ntBASIC1.44□□□□□ -2.18
IFT43Q96FT9 RNU1-124P-201ENST00000363861 145 ntBASIC1.43□□□□□ -2.18
IFT43Q96FT9 MIR573-201ENST00000384964 99 ntBASIC1.43□□□□□ -2.18
IFT43Q96FT9 MIR548L-201ENST00000408303 86 ntBASIC1.43□□□□□ -2.18
IFT43Q96FT9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.43□□□□□ -2.18
IFT43Q96FT9 MIR8070-201ENST00000616510 88 ntBASIC1.43□□□□□ -2.18
IFT43Q96FT9 MIR1265-201ENST00000408444 86 ntBASIC1.42□□□□□ -2.18
IFT43Q96FT9 RNU6-955P-201ENST00000410497 104 ntBASIC1.42□□□□□ -2.18
IFT43Q96FT9 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.42□□□□□ -2.18
IFT43Q96FT9 MIR3612-201ENST00000579753 87 ntBASIC1.42□□□□□ -2.18
IFT43Q96FT9 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
IFT43Q96FT9 SNORD18A-201ENST00000363753 72 ntBASIC1.41□□□□□ -2.18
IFT43Q96FT9 RNU6-1335P-201ENST00000365426 107 ntBASIC1.41□□□□□ -2.18
IFT43Q96FT9 RNU6-1039P-201ENST00000383931 107 ntBASIC1.41□□□□□ -2.18
IFT43Q96FT9 MIR499A-201ENST00000384903 122 ntBASIC1.41□□□□□ -2.18
IFT43Q96FT9 RNU6-604P-201ENST00000390917 100 ntBASIC1.41□□□□□ -2.18
IFT43Q96FT9 MIR1287-201ENST00000408492 90 ntBASIC1.41□□□□□ -2.18
IFT43Q96FT9 RNA5SP47-201ENST00000517230 109 ntBASIC1.41□□□□□ -2.18
IFT43Q96FT9 MIR3678-201ENST00000578455 94 ntBASIC1.41□□□□□ -2.18
IFT43Q96FT9 RNU6-1216P-201ENST00000362590 107 ntBASIC1.4□□□□□ -2.19
IFT43Q96FT9 SNORD113.1-201ENST00000363280 73 ntBASIC1.4□□□□□ -2.19
IFT43Q96FT9 RNU6-471P-201ENST00000383944 106 ntBASIC1.4□□□□□ -2.19
IFT43Q96FT9 RNA5SP255-201ENST00000516370 107 ntBASIC1.4□□□□□ -2.19
IFT43Q96FT9 AC068338.1-201ENST00000565567 176 ntBASIC1.4□□□□□ -2.19
IFT43Q96FT9 AL353770.2-201ENST00000620024 78 ntBASIC1.4□□□□□ -2.19
IFT43Q96FT9 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
IFT43Q96FT9 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
IFT43Q96FT9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
IFT43Q96FT9 RNU6-726P-201ENST00000364680 107 ntBASIC1.39□□□□□ -2.19
IFT43Q96FT9 RNU6-630P-201ENST00000391258 106 ntBASIC1.39□□□□□ -2.19
IFT43Q96FT9 AC093423.1-201ENST00000440817 142 ntBASIC1.39□□□□□ -2.19
IFT43Q96FT9 NAMPTP3-201ENST00000569273 224 ntBASIC1.39□□□□□ -2.19
IFT43Q96FT9 AC005520.4-201ENST00000604337 90 ntBASIC1.39□□□□□ -2.19
IFT43Q96FT9 MIR6509-201ENST00000614603 85 ntBASIC1.39□□□□□ -2.19
IFT43Q96FT9 Y_RNA.205-201ENST00000364128 113 ntBASIC1.38□□□□□ -2.19
IFT43Q96FT9 RNU6-54P-201ENST00000365563 107 ntBASIC1.37□□□□□ -2.19
IFT43Q96FT9 RNU6V-201ENST00000384105 107 ntBASIC1.37□□□□□ -2.19
IFT43Q96FT9 MIR618-201ENST00000385287 98 ntBASIC1.37□□□□□ -2.19
IFT43Q96FT9 MT-TY-201ENST00000387409 66 ntBASIC1.37□□□□□ -2.19
IFT43Q96FT9 SNORA25.4-201ENST00000363666 124 ntBASIC1.36□□□□□ -2.19
IFT43Q96FT9 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
IFT43Q96FT9 Y_RNA.443-201ENST00000384135 111 ntBASIC1.36□□□□□ -2.19
IFT43Q96FT9 SCARNA16.5-201ENST00000517114 183 ntBASIC1.36□□□□□ -2.19
IFT43Q96FT9 MIR4460-201ENST00000577862 86 ntBASIC1.36□□□□□ -2.19
IFT43Q96FT9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
IFT43Q96FT9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.34□□□□□ -2.19
IFT43Q96FT9 RNU6-716P-201ENST00000365621 103 ntBASIC1.34□□□□□ -2.19
IFT43Q96FT9 SNORD116-24-201ENST00000384549 92 ntBASIC1.34□□□□□ -2.19
IFT43Q96FT9 SNORD99-201ENST00000408612 74 ntBASIC1.34□□□□□ -2.19
IFT43Q96FT9 MIR6078-201ENST00000611069 100 ntBASIC1.34□□□□□ -2.19
IFT43Q96FT9 RNU1-141P-201ENST00000364623 158 ntBASIC1.33□□□□□ -2.2
IFT43Q96FT9 SNORA8.2-201ENST00000384372 139 ntBASIC1.33□□□□□ -2.2
IFT43Q96FT9 MIR758-201ENST00000390227 88 ntBASIC1.33□□□□□ -2.2
IFT43Q96FT9 MIR1276-201ENST00000408707 83 ntBASIC1.33□□□□□ -2.2
IFT43Q96FT9 AC011195.1-201ENST00000578177 177 ntBASIC1.33□□□□□ -2.2
IFT43Q96FT9 MIR3660-201ENST00000584845 100 ntBASIC1.33□□□□□ -2.2
IFT43Q96FT9 RNU6-260P-201ENST00000384092 107 ntBASIC1.32□□□□□ -2.2
IFT43Q96FT9 SNORD42B-201ENST00000458893 67 ntBASIC1.32□□□□□ -2.2
IFT43Q96FT9 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.32□□□□□ -2.2
IFT43Q96FT9 MIR6504-201ENST00000613520 61 ntBASIC1.32□□□□□ -2.2
IFT43Q96FT9 AC073869.9-201ENST00000641610 120 ntBASIC1.32□□□□□ -2.2
IFT43Q96FT9 MIR18A-201ENST00000362310 71 ntBASIC1.31□□□□□ -2.2
IFT43Q96FT9 RNU4-45P-201ENST00000365469 141 ntBASIC1.31□□□□□ -2.2
IFT43Q96FT9 MIR203A-201ENST00000384836 110 ntBASIC1.31□□□□□ -2.2
IFT43Q96FT9 MIR7-2-201ENST00000384970 110 ntBASIC1.31□□□□□ -2.2
IFT43Q96FT9 RNU6-269P-201ENST00000391077 97 ntBASIC1.31□□□□□ -2.2
IFT43Q96FT9 MTND4LP1-201ENST00000446263 157 ntBASIC1.31□□□□□ -2.2
IFT43Q96FT9 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.31□□□□□ -2.2
IFT43Q96FT9 MIR3657-201ENST00000584818 117 ntBASIC1.31□□□□□ -2.2
IFT43Q96FT9 MIR6828-201ENST00000636181 60 ntBASIC1.31□□□□□ -2.2
IFT43Q96FT9 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
IFT43Q96FT9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.31□□□□□ -2.2
IFT43Q96FT9 SNORD114-4-201ENST00000363962 75 ntBASIC1.3□□□□□ -2.2
IFT43Q96FT9 SNORA40.6-201ENST00000391153 128 ntBASIC1.3□□□□□ -2.2
IFT43Q96FT9 RNU6-982P-201ENST00000516216 102 ntBASIC1.28□□□□□ -2.2
IFT43Q96FT9 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.28□□□□□ -2.2
IFT43Q96FT9 AC103706.3-201ENST00000636297 85 ntBASIC1.28□□□□□ -2.2
IFT43Q96FT9 RNU6-939P-201ENST00000384634 107 ntBASIC1.27□□□□□ -2.21
IFT43Q96FT9 AC069503.3-201ENST00000618674 145 ntBASIC1.27□□□□□ -2.21
IFT43Q96FT9 AL162376.1-201ENST00000624117 175 ntBASIC1.27□□□□□ -2.21
IFT43Q96FT9 SNORA2.1-201ENST00000363089 137 ntBASIC1.26□□□□□ -2.21
IFT43Q96FT9 RNU6-668P-201ENST00000364180 107 ntBASIC1.26□□□□□ -2.21
IFT43Q96FT9 RNA5SP227-201ENST00000516184 113 ntBASIC1.26□□□□□ -2.21
IFT43Q96FT9 MIR4511-201ENST00000582784 87 ntBASIC1.26□□□□□ -2.21
IFT43Q96FT9 RNA5SP102-201ENST00000516865 106 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 179.9 ms