Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RNA5SP136-201ENST00000410906 107 ntBASIC-1.15□□□□□ -2.59
ECHDC3Q96DC8 RNU6-54P-201ENST00000365563 107 ntBASIC-1.16□□□□□ -2.6
ECHDC3Q96DC8 MIR518B-201ENST00000385127 83 ntBASIC-1.16□□□□□ -2.6
ECHDC3Q96DC8 MIR759-201ENST00000390224 91 ntBASIC-1.16□□□□□ -2.6
ECHDC3Q96DC8 MTCYBP9-201ENST00000431021 303 ntBASIC-1.16□□□□□ -2.6
ECHDC3Q96DC8 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.17□□□□□ -2.6
ECHDC3Q96DC8 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.17□□□□□ -2.6
ECHDC3Q96DC8 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.17□□□□□ -2.6
ECHDC3Q96DC8 RNU6-738P-201ENST00000384531 106 ntBASIC-1.17□□□□□ -2.6
ECHDC3Q96DC8 MIR568-201ENST00000385036 95 ntBASIC-1.17□□□□□ -2.6
ECHDC3Q96DC8 RNU6-721P-201ENST00000410155 105 ntBASIC-1.17□□□□□ -2.6
ECHDC3Q96DC8 HLA-S-202ENST00000425174 53 ntBASIC-1.17□□□□□ -2.6
ECHDC3Q96DC8 AC072026.1-201ENST00000605023 201 ntBASIC-1.17□□□□□ -2.6
ECHDC3Q96DC8 AC062037.2-201ENST00000610137 73 ntBASIC-1.17□□□□□ -2.6
ECHDC3Q96DC8 SNORD114-4-201ENST00000363962 75 ntBASIC-1.18□□□□□ -2.6
ECHDC3Q96DC8 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.18□□□□□ -2.6
ECHDC3Q96DC8 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.18□□□□□ -2.6
ECHDC3Q96DC8 AC097510.1-201ENST00000510945 133 ntBASIC-1.18□□□□□ -2.6
ECHDC3Q96DC8 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.18□□□□□ -2.6
ECHDC3Q96DC8 AC141273.2-201ENST00000618989 130 ntBASIC-1.18□□□□□ -2.6
ECHDC3Q96DC8 MTND5P18-201ENST00000445624 1801 ntBASIC-1.18□□□□□ -2.6
ECHDC3Q96DC8 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.19□□□□□ -2.6
ECHDC3Q96DC8 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.19□□□□□ -2.6
ECHDC3Q96DC8 SNORA20.1-201ENST00000364790 130 ntBASIC-1.19□□□□□ -2.6
ECHDC3Q96DC8 MIR451A-201ENST00000385059 72 ntBASIC-1.19□□□□□ -2.6
ECHDC3Q96DC8 RNU6-75P-201ENST00000515944 104 ntBASIC-1.19□□□□□ -2.6
ECHDC3Q96DC8 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.19□□□□□ -2.6
ECHDC3Q96DC8 SNORA81.3-201ENST00000517283 198 ntBASIC-1.19□□□□□ -2.6
ECHDC3Q96DC8 MIR3179-1-201ENST00000578940 84 ntBASIC-1.19□□□□□ -2.6
ECHDC3Q96DC8 MIR3179-2-201ENST00000579107 84 ntBASIC-1.19□□□□□ -2.6
ECHDC3Q96DC8 MIR3179-3-201ENST00000579566 84 ntBASIC-1.19□□□□□ -2.6
ECHDC3Q96DC8 AL442128.1-201ENST00000615151 90 ntBASIC-1.19□□□□□ -2.6
ECHDC3Q96DC8 MIR3179-4-201ENST00000617599 84 ntBASIC-1.19□□□□□ -2.6
ECHDC3Q96DC8 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.2□□□□□ -2.6
ECHDC3Q96DC8 RNU6-647P-201ENST00000364243 107 ntBASIC-1.2□□□□□ -2.6
ECHDC3Q96DC8 RNU6-915P-201ENST00000364943 103 ntBASIC-1.2□□□□□ -2.6
ECHDC3Q96DC8 RNU6-409P-201ENST00000384114 104 ntBASIC-1.2□□□□□ -2.6
ECHDC3Q96DC8 SNORD42B-201ENST00000458893 67 ntBASIC-1.2□□□□□ -2.6
ECHDC3Q96DC8 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.2□□□□□ -2.6
ECHDC3Q96DC8 AC140658.3-201ENST00000567603 271 ntBASIC-1.2□□□□□ -2.6
ECHDC3Q96DC8 AC138207.3-201ENST00000585289 166 ntBASIC-1.2□□□□□ -2.6
ECHDC3Q96DC8 RNU4-11P-201ENST00000365287 132 ntBASIC-1.21□□□□□ -2.6
ECHDC3Q96DC8 RNU6-460P-201ENST00000391158 108 ntBASIC-1.21□□□□□ -2.6
ECHDC3Q96DC8 RNU6-762P-201ENST00000517107 102 ntBASIC-1.21□□□□□ -2.6
ECHDC3Q96DC8 MIR5704-201ENST00000584029 77 ntBASIC-1.21□□□□□ -2.6
ECHDC3Q96DC8 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.22□□□□□ -2.6
ECHDC3Q96DC8 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.22□□□□□ -2.6
ECHDC3Q96DC8 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.22□□□□□ -2.6
ECHDC3Q96DC8 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.22□□□□□ -2.6
ECHDC3Q96DC8 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.22□□□□□ -2.6
ECHDC3Q96DC8 SNORD22.1-201ENST00000516331 125 ntBASIC-1.22□□□□□ -2.6
ECHDC3Q96DC8 MIR6854-201ENST00000614935 69 ntBASIC-1.22□□□□□ -2.6
ECHDC3Q96DC8 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.23□□□□□ -2.61
ECHDC3Q96DC8 SNORD74.6-201ENST00000364796 70 ntBASIC-1.23□□□□□ -2.61
ECHDC3Q96DC8 MIR1263-201ENST00000408324 86 ntBASIC-1.23□□□□□ -2.61
ECHDC3Q96DC8 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.24□□□□□ -2.61
ECHDC3Q96DC8 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.24□□□□□ -2.61
ECHDC3Q96DC8 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.24□□□□□ -2.61
ECHDC3Q96DC8 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.24□□□□□ -2.61
ECHDC3Q96DC8 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.24□□□□□ -2.61
ECHDC3Q96DC8 MIR1302-3-201ENST00000408128 138 ntBASIC-1.24□□□□□ -2.61
ECHDC3Q96DC8 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.24□□□□□ -2.61
ECHDC3Q96DC8 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.24□□□□□ -2.61
ECHDC3Q96DC8 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.24□□□□□ -2.61
ECHDC3Q96DC8 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.24□□□□□ -2.61
ECHDC3Q96DC8 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.24□□□□□ -2.61
ECHDC3Q96DC8 AP001340.1-201ENST00000624405 217 ntBASIC-1.24□□□□□ -2.61
ECHDC3Q96DC8 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.25□□□□□ -2.61
ECHDC3Q96DC8 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.25□□□□□ -2.61
ECHDC3Q96DC8 RNU6-732P-201ENST00000516033 103 ntBASIC-1.25□□□□□ -2.61
ECHDC3Q96DC8 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.25□□□□□ -2.61
ECHDC3Q96DC8 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.25□□□□□ -2.61
ECHDC3Q96DC8 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.26□□□□□ -2.61
ECHDC3Q96DC8 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.26□□□□□ -2.61
ECHDC3Q96DC8 RNU6-540P-201ENST00000384622 101 ntBASIC-1.26□□□□□ -2.61
ECHDC3Q96DC8 RNU6-592P-201ENST00000411333 103 ntBASIC-1.26□□□□□ -2.61
ECHDC3Q96DC8 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.26□□□□□ -2.61
ECHDC3Q96DC8 MIR5591-201ENST00000578248 65 ntBASIC-1.26□□□□□ -2.61
ECHDC3Q96DC8 MIR6773-201ENST00000612812 74 ntBASIC-1.26□□□□□ -2.61
ECHDC3Q96DC8 MIR8068-201ENST00000618032 68 ntBASIC-1.26□□□□□ -2.61
ECHDC3Q96DC8 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.27□□□□□ -2.61
ECHDC3Q96DC8 MIR6129-201ENST00000616087 109 ntBASIC-1.27□□□□□ -2.61
ECHDC3Q96DC8 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.28□□□□□ -2.61
ECHDC3Q96DC8 SNORD115-23-201ENST00000364461 82 ntBASIC-1.28□□□□□ -2.61
ECHDC3Q96DC8 AC022137.1-201ENST00000483735 151 ntBASIC-1.28□□□□□ -2.61
ECHDC3Q96DC8 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.29□□□□□ -2.62
ECHDC3Q96DC8 SNORD50.2-201ENST00000365465 70 ntBASIC-1.29□□□□□ -2.62
ECHDC3Q96DC8 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.29□□□□□ -2.62
ECHDC3Q96DC8 RNU6-816P-201ENST00000390914 107 ntBASIC-1.29□□□□□ -2.62
ECHDC3Q96DC8 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.29□□□□□ -2.62
ECHDC3Q96DC8 RNU6-337P-201ENST00000391243 106 ntBASIC-1.29□□□□□ -2.62
ECHDC3Q96DC8 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.29□□□□□ -2.62
ECHDC3Q96DC8 AL158147.1-201ENST00000443970 75 ntBASIC-1.29□□□□□ -2.62
ECHDC3Q96DC8 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.29□□□□□ -2.62
ECHDC3Q96DC8 RNA5SP272-201ENST00000516095 111 ntBASIC-1.29□□□□□ -2.62
ECHDC3Q96DC8 RNU6-781P-201ENST00000516377 101 ntBASIC-1.29□□□□□ -2.62
ECHDC3Q96DC8 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.29□□□□□ -2.62
ECHDC3Q96DC8 AC025521.1-201ENST00000621624 286 ntBASIC-1.29□□□□□ -2.62
ECHDC3Q96DC8 MIRLET7B-201ENST00000385140 83 ntBASIC-1.3□□□□□ -2.62
ECHDC3Q96DC8 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.3□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms