Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 AC068338.1-201ENST00000565567 176 ntBASIC1.4□□□□□ -2.19
VTI1AQ96AJ9 MIR3660-201ENST00000584845 100 ntBASIC1.4□□□□□ -2.19
VTI1AQ96AJ9 RNU2-59P-201ENST00000410482 191 ntBASIC1.39□□□□□ -2.19
VTI1AQ96AJ9 Y_RNA.606-201ENST00000410579 103 ntBASIC1.39□□□□□ -2.19
VTI1AQ96AJ9 AC011195.1-201ENST00000578177 177 ntBASIC1.39□□□□□ -2.19
VTI1AQ96AJ9 U6.81-201ENST00000612550 106 ntBASIC1.39□□□□□ -2.19
VTI1AQ96AJ9 MIR664A-201ENST00000626086 82 ntBASIC1.39□□□□□ -2.19
VTI1AQ96AJ9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.38□□□□□ -2.19
VTI1AQ96AJ9 RNU6-330P-201ENST00000363015 107 ntBASIC1.38□□□□□ -2.19
VTI1AQ96AJ9 Y_RNA.258-201ENST00000364613 105 ntBASIC1.38□□□□□ -2.19
VTI1AQ96AJ9 RNU1-93P-201ENST00000364704 169 ntBASIC1.38□□□□□ -2.19
VTI1AQ96AJ9 RNU6-154P-201ENST00000384306 106 ntBASIC1.38□□□□□ -2.19
VTI1AQ96AJ9 SNORD41.1-201ENST00000391000 69 ntBASIC1.38□□□□□ -2.19
VTI1AQ96AJ9 RNU6-1177P-201ENST00000391058 104 ntBASIC1.38□□□□□ -2.19
VTI1AQ96AJ9 MIR4295-201ENST00000585286 85 ntBASIC1.38□□□□□ -2.19
VTI1AQ96AJ9 Y_RNA.545-201ENST00000384652 105 ntBASIC1.37□□□□□ -2.19
VTI1AQ96AJ9 AC244098.3-201ENST00000424803 96 ntBASIC1.37□□□□□ -2.19
VTI1AQ96AJ9 AC087343.1-201ENST00000477341 475 ntBASIC1.37□□□□□ -2.19
VTI1AQ96AJ9 Y_RNA.36-201ENST00000362602 112 ntBASIC1.36□□□□□ -2.19
VTI1AQ96AJ9 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
VTI1AQ96AJ9 AC022709.1-201ENST00000615967 87 ntBASIC1.36□□□□□ -2.19
VTI1AQ96AJ9 MIR18A-201ENST00000362310 71 ntBASIC1.35□□□□□ -2.19
VTI1AQ96AJ9 RNU6-726P-201ENST00000364680 107 ntBASIC1.35□□□□□ -2.19
VTI1AQ96AJ9 RNU6-716P-201ENST00000365621 103 ntBASIC1.35□□□□□ -2.19
VTI1AQ96AJ9 RNA5SP480-201ENST00000516840 109 ntBASIC1.35□□□□□ -2.19
VTI1AQ96AJ9 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.35□□□□□ -2.19
VTI1AQ96AJ9 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.34□□□□□ -2.19
VTI1AQ96AJ9 RNU6-70P-201ENST00000516438 60 ntBASIC1.34□□□□□ -2.19
VTI1AQ96AJ9 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.34□□□□□ -2.19
VTI1AQ96AJ9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
VTI1AQ96AJ9 MIR548L-201ENST00000408303 86 ntBASIC1.33□□□□□ -2.2
VTI1AQ96AJ9 SCARNA16.5-201ENST00000517114 183 ntBASIC1.33□□□□□ -2.2
VTI1AQ96AJ9 RNU6-1223P-201ENST00000517124 104 ntBASIC1.33□□□□□ -2.2
VTI1AQ96AJ9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.33□□□□□ -2.2
VTI1AQ96AJ9 RNU6-382P-201ENST00000365181 106 ntBASIC1.32□□□□□ -2.2
VTI1AQ96AJ9 RNU6-411P-201ENST00000384451 107 ntBASIC1.32□□□□□ -2.2
VTI1AQ96AJ9 MIR548J-201ENST00000408833 112 ntBASIC1.32□□□□□ -2.2
VTI1AQ96AJ9 AC073261.1-201ENST00000429409 121 ntBASIC1.32□□□□□ -2.2
VTI1AQ96AJ9 OR2A41P-201ENST00000473586 105 ntBASIC1.32□□□□□ -2.2
VTI1AQ96AJ9 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
VTI1AQ96AJ9 MIR548O2-201ENST00000616090 70 ntBASIC1.32□□□□□ -2.2
VTI1AQ96AJ9 MIR4773-1-201ENST00000637203 78 ntBASIC1.32□□□□□ -2.2
VTI1AQ96AJ9 AC093423.1-201ENST00000440817 142 ntBASIC1.31□□□□□ -2.2
VTI1AQ96AJ9 Y_RNA.681-201ENST00000516445 113 ntBASIC1.31□□□□□ -2.2
VTI1AQ96AJ9 RNU6-1015P-201ENST00000517121 99 ntBASIC1.31□□□□□ -2.2
VTI1AQ96AJ9 MIR151B-201ENST00000584249 96 ntBASIC1.31□□□□□ -2.2
VTI1AQ96AJ9 MIR6788-201ENST00000618842 66 ntBASIC1.31□□□□□ -2.2
VTI1AQ96AJ9 RNU6-681P-201ENST00000364012 104 ntBASIC1.3□□□□□ -2.2
VTI1AQ96AJ9 SNORA8.1-201ENST00000384250 140 ntBASIC1.3□□□□□ -2.2
VTI1AQ96AJ9 MIR6828-201ENST00000636181 60 ntBASIC1.3□□□□□ -2.2
VTI1AQ96AJ9 SNORA36.1-201ENST00000363424 132 ntBASIC1.29□□□□□ -2.2
VTI1AQ96AJ9 MIR216B-201ENST00000390186 82 ntBASIC1.29□□□□□ -2.2
VTI1AQ96AJ9 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.29□□□□□ -2.2
VTI1AQ96AJ9 RNU6-687P-201ENST00000516443 89 ntBASIC1.29□□□□□ -2.2
VTI1AQ96AJ9 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.29□□□□□ -2.2
VTI1AQ96AJ9 AL353765.1-201ENST00000605514 183 ntBASIC1.29□□□□□ -2.2
VTI1AQ96AJ9 RNU6-54P-201ENST00000365563 107 ntBASIC1.28□□□□□ -2.2
VTI1AQ96AJ9 RNU6-269P-201ENST00000391077 97 ntBASIC1.28□□□□□ -2.2
VTI1AQ96AJ9 RNU7-74P-201ENST00000459104 62 ntBASIC1.28□□□□□ -2.2
VTI1AQ96AJ9 MIR598-201ENST00000384868 97 ntBASIC1.27□□□□□ -2.21
VTI1AQ96AJ9 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.27□□□□□ -2.21
VTI1AQ96AJ9 RNU6-495P-201ENST00000362995 107 ntBASIC1.26□□□□□ -2.21
VTI1AQ96AJ9 Y_RNA.540-201ENST00000384638 111 ntBASIC1.26□□□□□ -2.21
VTI1AQ96AJ9 RNA5SP222-201ENST00000411039 105 ntBASIC1.26□□□□□ -2.21
VTI1AQ96AJ9 RNA5SP94-201ENST00000516917 108 ntBASIC1.26□□□□□ -2.21
VTI1AQ96AJ9 NAMPTP3-201ENST00000569273 224 ntBASIC1.26□□□□□ -2.21
VTI1AQ96AJ9 SNORD114-26-201ENST00000363543 72 ntBASIC1.25□□□□□ -2.21
VTI1AQ96AJ9 RNY1P8-201ENST00000383970 114 ntBASIC1.25□□□□□ -2.21
VTI1AQ96AJ9 RNU6V-201ENST00000384105 107 ntBASIC1.25□□□□□ -2.21
VTI1AQ96AJ9 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
VTI1AQ96AJ9 RNU6-587P-201ENST00000391282 106 ntBASIC1.25□□□□□ -2.21
VTI1AQ96AJ9 SNORD75.2-201ENST00000408784 58 ntBASIC1.25□□□□□ -2.21
VTI1AQ96AJ9 MIR3675-201ENST00000583661 73 ntBASIC1.25□□□□□ -2.21
VTI1AQ96AJ9 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.25□□□□□ -2.21
VTI1AQ96AJ9 MIR6767-201ENST00000637302 66 ntBASIC1.25□□□□□ -2.21
VTI1AQ96AJ9 RNU1-141P-201ENST00000364623 158 ntBASIC1.24□□□□□ -2.21
VTI1AQ96AJ9 RNU6-1241P-201ENST00000384536 107 ntBASIC1.24□□□□□ -2.21
VTI1AQ96AJ9 RNU6-274P-201ENST00000459566 107 ntBASIC1.24□□□□□ -2.21
VTI1AQ96AJ9 AC139453.2-201ENST00000487255 133 ntBASIC1.24□□□□□ -2.21
VTI1AQ96AJ9 PVT1_3.1-201ENST00000620853 95 ntBASIC1.24□□□□□ -2.21
VTI1AQ96AJ9 AL162376.1-201ENST00000624117 175 ntBASIC1.24□□□□□ -2.21
VTI1AQ96AJ9 RNU4-45P-201ENST00000365469 141 ntBASIC1.23□□□□□ -2.21
VTI1AQ96AJ9 MT-TY-201ENST00000387409 66 ntBASIC1.23□□□□□ -2.21
VTI1AQ96AJ9 RNU7-24P-201ENST00000458867 62 ntBASIC1.23□□□□□ -2.21
VTI1AQ96AJ9 RNA5SP227-201ENST00000516184 113 ntBASIC1.23□□□□□ -2.21
VTI1AQ96AJ9 SNORA8.2-201ENST00000384372 139 ntBASIC1.22□□□□□ -2.21
VTI1AQ96AJ9 RNA5SP484-201ENST00000458857 111 ntBASIC1.22□□□□□ -2.21
VTI1AQ96AJ9 SNORD42B-201ENST00000458893 67 ntBASIC1.22□□□□□ -2.21
VTI1AQ96AJ9 RNA5SP268-201ENST00000516828 124 ntBASIC1.22□□□□□ -2.21
VTI1AQ96AJ9 MIR4460-201ENST00000577862 86 ntBASIC1.22□□□□□ -2.21
VTI1AQ96AJ9 MIR1285-1-201ENST00000408593 84 ntBASIC1.21□□□□□ -2.22
VTI1AQ96AJ9 RNU6-634P-201ENST00000459134 106 ntBASIC1.21□□□□□ -2.22
VTI1AQ96AJ9 MIR7107-201ENST00000611489 80 ntBASIC1.21□□□□□ -2.22
VTI1AQ96AJ9 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
VTI1AQ96AJ9 RNA5SP436-201ENST00000516020 115 ntBASIC1.19□□□□□ -2.22
VTI1AQ96AJ9 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.19□□□□□ -2.22
VTI1AQ96AJ9 RNU6-752P-201ENST00000516376 102 ntBASIC1.19□□□□□ -2.22
VTI1AQ96AJ9 MIR6779-201ENST00000617283 64 ntBASIC1.19□□□□□ -2.22
VTI1AQ96AJ9 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
VTI1AQ96AJ9 RNA5SP325-201ENST00000363756 130 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms