Protein–RNA interactions for Protein: Q8WWF5

ZNRF4, E3 ubiquitin-protein ligase ZNRF4, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF4Q8WWF5 RNU6-1134P-201ENST00000365156 101 ntBASIC0.28□□□□□ -2.36
ZNRF4Q8WWF5 SNORA2A-201ENST00000383885 135 ntBASIC0.28□□□□□ -2.36
ZNRF4Q8WWF5 RNU6-815P-201ENST00000384080 113 ntBASIC0.28□□□□□ -2.36
ZNRF4Q8WWF5 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.28□□□□□ -2.36
ZNRF4Q8WWF5 SNORD110-201ENST00000408189 75 ntBASIC0.28□□□□□ -2.36
ZNRF4Q8WWF5 AC073261.1-201ENST00000429409 121 ntBASIC0.28□□□□□ -2.36
ZNRF4Q8WWF5 RNU6-844P-201ENST00000517175 102 ntBASIC0.28□□□□□ -2.36
ZNRF4Q8WWF5 MIR3140-201ENST00000583685 90 ntBASIC0.28□□□□□ -2.36
ZNRF4Q8WWF5 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
ZNRF4Q8WWF5 RNU6-1298P-201ENST00000362456 101 ntBASIC0.27□□□□□ -2.37
ZNRF4Q8WWF5 SNORD114-23-201ENST00000363536 72 ntBASIC0.27□□□□□ -2.37
ZNRF4Q8WWF5 SNORD116-22-201ENST00000384430 92 ntBASIC0.27□□□□□ -2.37
ZNRF4Q8WWF5 RNA5SP193-201ENST00000410353 107 ntBASIC0.27□□□□□ -2.37
ZNRF4Q8WWF5 AC093423.1-201ENST00000440817 142 ntBASIC0.27□□□□□ -2.37
ZNRF4Q8WWF5 Y_RNA.694-201ENST00000516677 117 ntBASIC0.27□□□□□ -2.37
ZNRF4Q8WWF5 RNU5B-6P-201ENST00000516765 68 ntBASIC0.27□□□□□ -2.37
ZNRF4Q8WWF5 MIR1273G-201ENST00000577677 100 ntBASIC0.27□□□□□ -2.37
ZNRF4Q8WWF5 MIR4460-201ENST00000577862 86 ntBASIC0.27□□□□□ -2.37
ZNRF4Q8WWF5 MIR5582-201ENST00000579697 68 ntBASIC0.27□□□□□ -2.37
ZNRF4Q8WWF5 MIR4473-201ENST00000583731 91 ntBASIC0.27□□□□□ -2.37
ZNRF4Q8WWF5 MIR499B-201ENST00000636498 73 ntBASIC0.27□□□□□ -2.37
ZNRF4Q8WWF5 MIR924-201ENST00000638017 53 ntBASIC0.27□□□□□ -2.37
ZNRF4Q8WWF5 AC073869.9-201ENST00000641610 120 ntBASIC0.27□□□□□ -2.37
ZNRF4Q8WWF5 RNU6-219P-201ENST00000364728 107 ntBASIC0.26□□□□□ -2.37
ZNRF4Q8WWF5 Y_RNA.620-201ENST00000411009 88 ntBASIC0.26□□□□□ -2.37
ZNRF4Q8WWF5 MTATP6P29-201ENST00000415057 132 ntBASIC0.26□□□□□ -2.37
ZNRF4Q8WWF5 SNORA62.5-201ENST00000516634 120 ntBASIC0.26□□□□□ -2.37
ZNRF4Q8WWF5 YWHAEP2-201ENST00000580066 112 ntBASIC0.26□□□□□ -2.37
ZNRF4Q8WWF5 AC022709.1-201ENST00000615967 87 ntBASIC0.26□□□□□ -2.37
ZNRF4Q8WWF5 MIR6513-201ENST00000621188 64 ntBASIC0.26□□□□□ -2.37
ZNRF4Q8WWF5 AC243829.3-201ENST00000622177 108 ntBASIC0.26□□□□□ -2.37
ZNRF4Q8WWF5 AC010487.4-201ENST00000637027 61 ntBASIC0.26□□□□□ -2.37
ZNRF4Q8WWF5 Y_RNA.17-201ENST00000362433 111 ntBASIC0.25□□□□□ -2.37
ZNRF4Q8WWF5 HMGN2P22-201ENST00000427588 175 ntBASIC0.25□□□□□ -2.37
ZNRF4Q8WWF5 RNU6-863P-201ENST00000515989 104 ntBASIC0.25□□□□□ -2.37
ZNRF4Q8WWF5 RNA5SP134-201ENST00000516492 96 ntBASIC0.25□□□□□ -2.37
ZNRF4Q8WWF5 RNA5SP170-201ENST00000517150 101 ntBASIC0.25□□□□□ -2.37
ZNRF4Q8WWF5 Y_RNA.205-201ENST00000364128 113 ntBASIC0.24□□□□□ -2.37
ZNRF4Q8WWF5 RNU6-1051P-201ENST00000365471 102 ntBASIC0.24□□□□□ -2.37
ZNRF4Q8WWF5 RNU6V-201ENST00000384105 107 ntBASIC0.24□□□□□ -2.37
ZNRF4Q8WWF5 Y_RNA.558-201ENST00000384685 113 ntBASIC0.24□□□□□ -2.37
ZNRF4Q8WWF5 MIR519C-201ENST00000385053 87 ntBASIC0.24□□□□□ -2.37
ZNRF4Q8WWF5 MT-TY-201ENST00000387409 66 ntBASIC0.24□□□□□ -2.37
ZNRF4Q8WWF5 MIR501-201ENST00000390204 84 ntBASIC0.24□□□□□ -2.37
ZNRF4Q8WWF5 MIR1236-201ENST00000408340 102 ntBASIC0.24□□□□□ -2.37
ZNRF4Q8WWF5 Y_RNA.593-201ENST00000410292 98 ntBASIC0.24□□□□□ -2.37
ZNRF4Q8WWF5 MIR4711-201ENST00000578274 70 ntBASIC0.24□□□□□ -2.37
ZNRF4Q8WWF5 MIR4796-201ENST00000580742 81 ntBASIC0.24□□□□□ -2.37
ZNRF4Q8WWF5 AC243829.6-201ENST00000612652 106 ntBASIC0.24□□□□□ -2.37
ZNRF4Q8WWF5 AC090625.1-201ENST00000357130 210 ntBASIC0.23□□□□□ -2.37
ZNRF4Q8WWF5 RNU6-633P-201ENST00000362612 103 ntBASIC0.23□□□□□ -2.37
ZNRF4Q8WWF5 RNA5SP457-201ENST00000363657 124 ntBASIC0.23□□□□□ -2.37
ZNRF4Q8WWF5 RNU6-1327P-201ENST00000365302 105 ntBASIC0.23□□□□□ -2.37
ZNRF4Q8WWF5 RNA5SP128-201ENST00000365305 116 ntBASIC0.23□□□□□ -2.37
ZNRF4Q8WWF5 MIR936-201ENST00000401264 98 ntBASIC0.23□□□□□ -2.37
ZNRF4Q8WWF5 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.23□□□□□ -2.37
ZNRF4Q8WWF5 MIR5706-201ENST00000579841 80 ntBASIC0.23□□□□□ -2.37
ZNRF4Q8WWF5 MIR6779-201ENST00000617283 64 ntBASIC0.23□□□□□ -2.37
ZNRF4Q8WWF5 SNORA9.1-201ENST00000362412 131 ntBASIC0.22□□□□□ -2.37
ZNRF4Q8WWF5 SNORA63.2-201ENST00000362603 126 ntBASIC0.22□□□□□ -2.37
ZNRF4Q8WWF5 Y_RNA.73-201ENST00000362910 113 ntBASIC0.22□□□□□ -2.37
ZNRF4Q8WWF5 RNU6-294P-201ENST00000364999 102 ntBASIC0.22□□□□□ -2.37
ZNRF4Q8WWF5 RNU6-54P-201ENST00000365563 107 ntBASIC0.22□□□□□ -2.37
ZNRF4Q8WWF5 AC108740.1-201ENST00000498629 225 ntBASIC0.22□□□□□ -2.37
ZNRF4Q8WWF5 RNU6-762P-201ENST00000517107 102 ntBASIC0.22□□□□□ -2.37
ZNRF4Q8WWF5 MIR548AE1-201ENST00000583292 70 ntBASIC0.22□□□□□ -2.37
ZNRF4Q8WWF5 AC069503.3-201ENST00000618674 145 ntBASIC0.22□□□□□ -2.37
ZNRF4Q8WWF5 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.21□□□□□ -2.38
ZNRF4Q8WWF5 MIR643-201ENST00000385267 97 ntBASIC0.21□□□□□ -2.38
ZNRF4Q8WWF5 RNU6-127P-201ENST00000390897 107 ntBASIC0.21□□□□□ -2.38
ZNRF4Q8WWF5 Y_RNA.611-201ENST00000410682 108 ntBASIC0.21□□□□□ -2.38
ZNRF4Q8WWF5 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.21□□□□□ -2.38
ZNRF4Q8WWF5 AC069113.3-201ENST00000521019 150 ntBASIC0.21□□□□□ -2.38
ZNRF4Q8WWF5 MIR548O2-201ENST00000616090 70 ntBASIC0.21□□□□□ -2.38
ZNRF4Q8WWF5 MIR548BB-201ENST00000626714 66 ntBASIC0.21□□□□□ -2.38
ZNRF4Q8WWF5 Y_RNA.369-201ENST00000365568 117 ntBASIC0.2□□□□□ -2.38
ZNRF4Q8WWF5 VTRNA1-3-201ENST00000365645 89 ntBASIC0.2□□□□□ -2.38
ZNRF4Q8WWF5 snoU13.17-201ENST00000458802 104 ntBASIC0.2□□□□□ -2.38
ZNRF4Q8WWF5 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
ZNRF4Q8WWF5 PVT1_3.1-201ENST00000620853 95 ntBASIC0.2□□□□□ -2.38
ZNRF4Q8WWF5 MIR494-201ENST00000349529 81 ntBASIC0.19□□□□□ -2.38
ZNRF4Q8WWF5 Y_RNA.125-201ENST00000363371 111 ntBASIC0.19□□□□□ -2.38
ZNRF4Q8WWF5 RNA5SP325-201ENST00000363756 130 ntBASIC0.19□□□□□ -2.38
ZNRF4Q8WWF5 SNORD115-37-201ENST00000363768 82 ntBASIC0.19□□□□□ -2.38
ZNRF4Q8WWF5 RNU6-675P-201ENST00000384236 104 ntBASIC0.19□□□□□ -2.38
ZNRF4Q8WWF5 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
ZNRF4Q8WWF5 U3.27-201ENST00000391237 200 ntBASIC0.19□□□□□ -2.38
ZNRF4Q8WWF5 MIR4677-201ENST00000584153 80 ntBASIC0.19□□□□□ -2.38
ZNRF4Q8WWF5 MIR8087-201ENST00000612745 78 ntBASIC0.19□□□□□ -2.38
ZNRF4Q8WWF5 IGLL4P-201ENST00000614590 133 ntBASIC0.19□□□□□ -2.38
ZNRF4Q8WWF5 Y_RNA.68-201ENST00000362881 102 ntBASIC0.18□□□□□ -2.38
ZNRF4Q8WWF5 Y_RNA.115-201ENST00000363272 98 ntBASIC0.18□□□□□ -2.38
ZNRF4Q8WWF5 RNY1P1-201ENST00000364372 112 ntBASIC0.18□□□□□ -2.38
ZNRF4Q8WWF5 RNU6-497P-201ENST00000365316 104 ntBASIC0.18□□□□□ -2.38
ZNRF4Q8WWF5 Y_RNA.437-201ENST00000384113 113 ntBASIC0.18□□□□□ -2.38
ZNRF4Q8WWF5 SNORA24B-201ENST00000384176 131 ntBASIC0.18□□□□□ -2.38
ZNRF4Q8WWF5 MIR516B1-201ENST00000385211 90 ntBASIC0.18□□□□□ -2.38
ZNRF4Q8WWF5 MIR216B-201ENST00000390186 82 ntBASIC0.18□□□□□ -2.38
ZNRF4Q8WWF5 RNU6-848P-201ENST00000515948 107 ntBASIC0.18□□□□□ -2.38
ZNRF4Q8WWF5 RNU6-617P-201ENST00000516147 107 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 343 ms