Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 AL096840.1-201ENST00000603287 93 ntBASIC2.67□□□□□ -1.98
TRIM41Q8WV44 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TRIM41Q8WV44 Y_RNA.443-201ENST00000384135 111 ntBASIC2.66□□□□□ -1.98
TRIM41Q8WV44 RNU1-78P-201ENST00000391248 165 ntBASIC2.66□□□□□ -1.98
TRIM41Q8WV44 RNU7-21P-201ENST00000459430 62 ntBASIC2.66□□□□□ -1.98
TRIM41Q8WV44 SNORD115-44-201ENST00000365391 82 ntBASIC2.65□□□□□ -1.99
TRIM41Q8WV44 MIR520F-201ENST00000384824 87 ntBASIC2.65□□□□□ -1.99
TRIM41Q8WV44 MIR9-2-201ENST00000384838 87 ntBASIC2.65□□□□□ -1.99
TRIM41Q8WV44 U3.27-201ENST00000391237 200 ntBASIC2.65□□□□□ -1.99
TRIM41Q8WV44 MIR1323-201ENST00000408090 73 ntBASIC2.65□□□□□ -1.99
TRIM41Q8WV44 AC244098.3-201ENST00000424803 96 ntBASIC2.65□□□□□ -1.99
TRIM41Q8WV44 RNU4ATAC11P-201ENST00000515939 126 ntBASIC2.65□□□□□ -1.99
TRIM41Q8WV44 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
TRIM41Q8WV44 MIR1-1-201ENST00000362147 71 ntBASIC2.64□□□□□ -1.99
TRIM41Q8WV44 Y_RNA.32-201ENST00000362589 110 ntBASIC2.64□□□□□ -1.99
TRIM41Q8WV44 SNORD115-24-201ENST00000363528 82 ntBASIC2.64□□□□□ -1.99
TRIM41Q8WV44 Y_RNA.258-201ENST00000364613 105 ntBASIC2.64□□□□□ -1.99
TRIM41Q8WV44 SNORA80D-201ENST00000384488 135 ntBASIC2.64□□□□□ -1.99
TRIM41Q8WV44 SNORD113.1-201ENST00000363280 73 ntBASIC2.63□□□□□ -1.99
TRIM41Q8WV44 SNORA25.4-201ENST00000363666 124 ntBASIC2.63□□□□□ -1.99
TRIM41Q8WV44 RNA5SP331-201ENST00000364986 107 ntBASIC2.63□□□□□ -1.99
TRIM41Q8WV44 AL691482.2-201ENST00000457453 84 ntBASIC2.63□□□□□ -1.99
TRIM41Q8WV44 RNU7-90P-201ENST00000459216 62 ntBASIC2.63□□□□□ -1.99
TRIM41Q8WV44 SNORA31.14-201ENST00000516728 116 ntBASIC2.63□□□□□ -1.99
TRIM41Q8WV44 RNU6-1216P-201ENST00000362590 107 ntBASIC2.62□□□□□ -1.99
TRIM41Q8WV44 RNU7-56P-201ENST00000458744 62 ntBASIC2.61□□□□□ -1.99
TRIM41Q8WV44 MIR4422-201ENST00000581938 83 ntBASIC2.61□□□□□ -1.99
TRIM41Q8WV44 RNU6-369P-201ENST00000362515 102 ntBASIC2.6□□□□□ -1.99
TRIM41Q8WV44 AC067940.1-201ENST00000458411 300 ntBASIC2.6□□□□□ -1.99
TRIM41Q8WV44 RNU7-104P-201ENST00000459398 79 ntBASIC2.6□□□□□ -1.99
TRIM41Q8WV44 AC008834.1-201ENST00000511612 175 ntBASIC2.6□□□□□ -1.99
TRIM41Q8WV44 MIR924-201ENST00000638017 53 ntBASIC2.6□□□□□ -1.99
TRIM41Q8WV44 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
TRIM41Q8WV44 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.59□□□□□ -1.99
TRIM41Q8WV44 RNU6-752P-201ENST00000516376 102 ntBASIC2.58□□□□□ -2
TRIM41Q8WV44 MIR517C-201ENST00000385103 95 ntBASIC2.56□□□□□ -2
TRIM41Q8WV44 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.56□□□□□ -2
TRIM41Q8WV44 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.56□□□□□ -2
TRIM41Q8WV44 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.55□□□□□ -2
TRIM41Q8WV44 Y_RNA.174-201ENST00000363781 105 ntBASIC2.55□□□□□ -2
TRIM41Q8WV44 uc_338.16-201ENST00000621804 95 ntBASIC2.55□□□□□ -2
TRIM41Q8WV44 RNU6-1126P-201ENST00000384002 107 ntBASIC2.54□□□□□ -2
TRIM41Q8WV44 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.54□□□□□ -2
TRIM41Q8WV44 SNORD79.1-201ENST00000516069 84 ntBASIC2.54□□□□□ -2
TRIM41Q8WV44 MIR548AG2-201ENST00000581228 64 ntBASIC2.54□□□□□ -2
TRIM41Q8WV44 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
TRIM41Q8WV44 SNORD116-24-201ENST00000384549 92 ntBASIC2.53□□□□□ -2
TRIM41Q8WV44 MIR203A-201ENST00000384836 110 ntBASIC2.53□□□□□ -2
TRIM41Q8WV44 MIR222-201ENST00000384992 110 ntBASIC2.53□□□□□ -2
TRIM41Q8WV44 MTND4LP19-201ENST00000403051 166 ntBASIC2.53□□□□□ -2
TRIM41Q8WV44 RNU7-161P-201ENST00000517289 62 ntBASIC2.53□□□□□ -2
TRIM41Q8WV44 NAMPTP3-201ENST00000569273 224 ntBASIC2.53□□□□□ -2
TRIM41Q8WV44 RNU6-902P-201ENST00000517212 91 ntBASIC2.52□□□□□ -2.01
TRIM41Q8WV44 AL136317.1-201ENST00000612653 226 ntBASIC2.52□□□□□ -2.01
TRIM41Q8WV44 RNA5SP403-201ENST00000363598 108 ntBASIC2.51□□□□□ -2.01
TRIM41Q8WV44 SNORD75.2-201ENST00000408784 58 ntBASIC2.51□□□□□ -2.01
TRIM41Q8WV44 SNORA70.22-201ENST00000517160 124 ntBASIC2.51□□□□□ -2.01
TRIM41Q8WV44 SNORA31.24-201ENST00000517232 57 ntBASIC2.51□□□□□ -2.01
TRIM41Q8WV44 MIR3122-201ENST00000577243 73 ntBASIC2.51□□□□□ -2.01
TRIM41Q8WV44 MIR3920-201ENST00000581751 86 ntBASIC2.51□□□□□ -2.01
TRIM41Q8WV44 MIR6509-201ENST00000614603 85 ntBASIC2.51□□□□□ -2.01
TRIM41Q8WV44 MIR1304-201ENST00000408243 91 ntBASIC2.5□□□□□ -2.01
TRIM41Q8WV44 RNU6-982P-201ENST00000516216 102 ntBASIC2.5□□□□□ -2.01
TRIM41Q8WV44 MIR216B-201ENST00000390186 82 ntBASIC2.48□□□□□ -2.01
TRIM41Q8WV44 AC067863.3-201ENST00000624172 122 ntBASIC2.48□□□□□ -2.01
TRIM41Q8WV44 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.48□□□□□ -2.01
TRIM41Q8WV44 RNU6-716P-201ENST00000365621 103 ntBASIC2.47□□□□□ -2.01
TRIM41Q8WV44 RNA5SP117-201ENST00000365294 118 ntBASIC2.46□□□□□ -2.02
TRIM41Q8WV44 MIR617-201ENST00000385030 97 ntBASIC2.46□□□□□ -2.02
TRIM41Q8WV44 MIR1827-201ENST00000408549 66 ntBASIC2.46□□□□□ -2.02
TRIM41Q8WV44 RNU6-1039P-201ENST00000383931 107 ntBASIC2.45□□□□□ -2.02
TRIM41Q8WV44 MIR644A-201ENST00000385262 94 ntBASIC2.45□□□□□ -2.02
TRIM41Q8WV44 MIR320A-201ENST00000385302 82 ntBASIC2.45□□□□□ -2.02
TRIM41Q8WV44 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC2.45□□□□□ -2.02
TRIM41Q8WV44 RNU6-54P-201ENST00000365563 107 ntBASIC2.44□□□□□ -2.02
TRIM41Q8WV44 MIR548L-201ENST00000408303 86 ntBASIC2.44□□□□□ -2.02
TRIM41Q8WV44 MIR4511-201ENST00000582784 87 ntBASIC2.44□□□□□ -2.02
TRIM41Q8WV44 AC103706.3-201ENST00000636297 85 ntBASIC2.44□□□□□ -2.02
TRIM41Q8WV44 RNU6-495P-201ENST00000362995 107 ntBASIC2.43□□□□□ -2.02
TRIM41Q8WV44 SNORD12-201ENST00000391002 90 ntBASIC2.43□□□□□ -2.02
TRIM41Q8WV44 MTND4LP1-201ENST00000446263 157 ntBASIC2.43□□□□□ -2.02
TRIM41Q8WV44 RNU6-668P-201ENST00000364180 107 ntBASIC2.42□□□□□ -2.02
TRIM41Q8WV44 MIR519E-201ENST00000385075 84 ntBASIC2.42□□□□□ -2.02
TRIM41Q8WV44 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
TRIM41Q8WV44 RNU6-469P-201ENST00000516253 101 ntBASIC2.41□□□□□ -2.02
TRIM41Q8WV44 AC069503.3-201ENST00000618674 145 ntBASIC2.41□□□□□ -2.02
TRIM41Q8WV44 SNORD89-201ENST00000390981 114 ntBASIC2.4□□□□□ -2.03
TRIM41Q8WV44 RNU7-24P-201ENST00000458867 62 ntBASIC2.4□□□□□ -2.03
TRIM41Q8WV44 MIR8087-201ENST00000612745 78 ntBASIC2.4□□□□□ -2.03
TRIM41Q8WV44 RNU6-1187P-201ENST00000364771 110 ntBASIC2.39□□□□□ -2.03
TRIM41Q8WV44 RNU6-499P-201ENST00000365615 107 ntBASIC2.39□□□□□ -2.03
TRIM41Q8WV44 RNU6V-201ENST00000384105 107 ntBASIC2.39□□□□□ -2.03
TRIM41Q8WV44 MIR548O2-201ENST00000616090 70 ntBASIC2.39□□□□□ -2.03
TRIM41Q8WV44 SNORA40.6-201ENST00000391153 128 ntBASIC2.38□□□□□ -2.03
TRIM41Q8WV44 AC002350.1-201ENST00000490759 375 ntBASIC2.37□□□□□ -2.03
TRIM41Q8WV44 MIR4723-201ENST00000585070 81 ntBASIC2.37□□□□□ -2.03
TRIM41Q8WV44 AC002429.1-201ENST00000437672 148 ntBASIC2.36□□□□□ -2.03
TRIM41Q8WV44 AC244669.1-204ENST00000621564 178 ntBASIC2.35□□□□□ -2.03
TRIM41Q8WV44 RNU6-987P-201ENST00000384759 104 ntBASIC2.34□□□□□ -2.03
TRIM41Q8WV44 RNU6ATAC2P-201ENST00000387943 126 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms