Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.16□□□□□ -2.44
SHROOM3Q8TF72 AL157777.2-201ENST00000258070 137 ntBASIC-0.17□□□□□ -2.44
SHROOM3Q8TF72 SNORD114-29-201ENST00000364819 70 ntBASIC-0.17□□□□□ -2.44
SHROOM3Q8TF72 U8.6-201ENST00000364939 135 ntBASIC-0.17□□□□□ -2.44
SHROOM3Q8TF72 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.17□□□□□ -2.44
SHROOM3Q8TF72 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.17□□□□□ -2.44
SHROOM3Q8TF72 RNU6-287P-201ENST00000516230 98 ntBASIC-0.17□□□□□ -2.44
SHROOM3Q8TF72 MIR3668-201ENST00000582138 75 ntBASIC-0.17□□□□□ -2.44
SHROOM3Q8TF72 SNORA18.1-201ENST00000363418 128 ntBASIC-0.17□□□□□ -2.44
SHROOM3Q8TF72 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.17□□□□□ -2.44
SHROOM3Q8TF72 SNORD14C-201ENST00000365382 88 ntBASIC-0.17□□□□□ -2.44
SHROOM3Q8TF72 SNORD50.2-201ENST00000365465 70 ntBASIC-0.17□□□□□ -2.44
SHROOM3Q8TF72 RNU6-65P-201ENST00000516332 98 ntBASIC-0.17□□□□□ -2.44
SHROOM3Q8TF72 MIR4696-201ENST00000581431 70 ntBASIC-0.17□□□□□ -2.44
SHROOM3Q8TF72 SNORD114-28-201ENST00000363610 72 ntBASIC-0.18□□□□□ -2.44
SHROOM3Q8TF72 SNORD114-11-201ENST00000363738 75 ntBASIC-0.18□□□□□ -2.44
SHROOM3Q8TF72 RNU6-154P-201ENST00000384306 106 ntBASIC-0.18□□□□□ -2.44
SHROOM3Q8TF72 SNORD4A-201ENST00000459174 72 ntBASIC-0.18□□□□□ -2.44
SHROOM3Q8TF72 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.18□□□□□ -2.44
SHROOM3Q8TF72 RNU6-774P-201ENST00000363238 107 ntBASIC-0.19□□□□□ -2.44
SHROOM3Q8TF72 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.19□□□□□ -2.44
SHROOM3Q8TF72 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.19□□□□□ -2.44
SHROOM3Q8TF72 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.19□□□□□ -2.44
SHROOM3Q8TF72 MIR548A1-201ENST00000385041 97 ntBASIC-0.19□□□□□ -2.44
SHROOM3Q8TF72 MIR876-201ENST00000401147 81 ntBASIC-0.19□□□□□ -2.44
SHROOM3Q8TF72 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.19□□□□□ -2.44
SHROOM3Q8TF72 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.19□□□□□ -2.44
SHROOM3Q8TF72 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.19□□□□□ -2.44
SHROOM3Q8TF72 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.19□□□□□ -2.44
SHROOM3Q8TF72 MIR4460-201ENST00000577862 86 ntBASIC-0.19□□□□□ -2.44
SHROOM3Q8TF72 MIR4694-201ENST00000578534 80 ntBASIC-0.19□□□□□ -2.44
SHROOM3Q8TF72 MIR548AE1-201ENST00000583292 70 ntBASIC-0.19□□□□□ -2.44
SHROOM3Q8TF72 MIR3666-201ENST00000607845 111 ntBASIC-0.19□□□□□ -2.44
SHROOM3Q8TF72 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.2□□□□□ -2.44
SHROOM3Q8TF72 RNU6-811P-201ENST00000384069 107 ntBASIC-0.2□□□□□ -2.44
SHROOM3Q8TF72 RNU7-85P-201ENST00000458851 63 ntBASIC-0.2□□□□□ -2.44
SHROOM3Q8TF72 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.2□□□□□ -2.44
SHROOM3Q8TF72 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.2□□□□□ -2.44
SHROOM3Q8TF72 RNU6-704P-201ENST00000364162 103 ntBASIC-0.21□□□□□ -2.44
SHROOM3Q8TF72 MIR601-201ENST00000385256 79 ntBASIC-0.21□□□□□ -2.44
SHROOM3Q8TF72 MT-TR-201ENST00000387439 65 ntBASIC-0.21□□□□□ -2.44
SHROOM3Q8TF72 MIR548U-201ENST00000390728 81 ntBASIC-0.21□□□□□ -2.44
SHROOM3Q8TF72 MTATP6P29-201ENST00000415057 132 ntBASIC-0.21□□□□□ -2.44
SHROOM3Q8TF72 AL158147.1-201ENST00000443970 75 ntBASIC-0.21□□□□□ -2.44
SHROOM3Q8TF72 RNU6-175P-201ENST00000516896 107 ntBASIC-0.21□□□□□ -2.44
SHROOM3Q8TF72 RNU6-86P-201ENST00000606534 107 ntBASIC-0.21□□□□□ -2.44
SHROOM3Q8TF72 RNU6-132P-201ENST00000383863 107 ntBASIC-0.21□□□□□ -2.44
SHROOM3Q8TF72 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.21□□□□□ -2.44
SHROOM3Q8TF72 RNU6-880P-201ENST00000384526 107 ntBASIC-0.21□□□□□ -2.44
SHROOM3Q8TF72 RNA5SP300-201ENST00000391197 107 ntBASIC-0.21□□□□□ -2.44
SHROOM3Q8TF72 RNA5SP451-201ENST00000410588 110 ntBASIC-0.21□□□□□ -2.44
SHROOM3Q8TF72 MIR3914-2-201ENST00000637339 95 ntBASIC-0.21□□□□□ -2.44
SHROOM3Q8TF72 SNORD114-4-201ENST00000363962 75 ntBASIC-0.22□□□□□ -2.44
SHROOM3Q8TF72 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.22□□□□□ -2.44
SHROOM3Q8TF72 AC109327.2-201ENST00000448339 378 ntBASIC-0.22□□□□□ -2.44
SHROOM3Q8TF72 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.22□□□□□ -2.44
SHROOM3Q8TF72 AC068339.1-201ENST00000526965 141 ntBASIC-0.22□□□□□ -2.44
SHROOM3Q8TF72 RNY1P9-201ENST00000532431 109 ntBASIC-0.22□□□□□ -2.44
SHROOM3Q8TF72 MIR4263-201ENST00000584745 83 ntBASIC-0.22□□□□□ -2.44
SHROOM3Q8TF72 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.23□□□□□ -2.45
SHROOM3Q8TF72 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.23□□□□□ -2.45
SHROOM3Q8TF72 AC008267.6-201ENST00000441664 139 ntBASIC-0.23□□□□□ -2.45
SHROOM3Q8TF72 AP000676.1-201ENST00000533307 52 ntBASIC-0.23□□□□□ -2.45
SHROOM3Q8TF72 RN7SL660P-201ENST00000614852 299 ntBASIC-0.23□□□□□ -2.45
SHROOM3Q8TF72 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.23□□□□□ -2.45
SHROOM3Q8TF72 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.23□□□□□ -2.45
SHROOM3Q8TF72 RNU6-455P-201ENST00000384681 107 ntBASIC-0.23□□□□□ -2.45
SHROOM3Q8TF72 SNORA49-201ENST00000386157 136 ntBASIC-0.23□□□□□ -2.45
SHROOM3Q8TF72 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.23□□□□□ -2.45
SHROOM3Q8TF72 AL353813.1-201ENST00000440700 253 ntBASIC-0.23□□□□□ -2.45
SHROOM3Q8TF72 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.23□□□□□ -2.45
SHROOM3Q8TF72 U6.95-201ENST00000636931 70 ntBASIC-0.23□□□□□ -2.45
SHROOM3Q8TF72 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.24□□□□□ -2.45
SHROOM3Q8TF72 RNU6-746P-201ENST00000384112 109 ntBASIC-0.24□□□□□ -2.45
SHROOM3Q8TF72 SNX3P1X-201ENST00000414887 175 ntBASIC-0.24□□□□□ -2.45
SHROOM3Q8TF72 SNORA25.13-201ENST00000516395 103 ntBASIC-0.24□□□□□ -2.45
SHROOM3Q8TF72 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.24□□□□□ -2.45
SHROOM3Q8TF72 AL391099.1-201ENST00000624635 187 ntBASIC-0.24□□□□□ -2.45
SHROOM3Q8TF72 SNORA32.1-201ENST00000364514 115 ntBASIC-0.25□□□□□ -2.45
SHROOM3Q8TF72 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.25□□□□□ -2.45
SHROOM3Q8TF72 MT-TQ-201ENST00000387372 72 ntBASIC-0.25□□□□□ -2.45
SHROOM3Q8TF72 RNA5SP292-201ENST00000390974 118 ntBASIC-0.25□□□□□ -2.45
SHROOM3Q8TF72 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.25□□□□□ -2.45
SHROOM3Q8TF72 SNORA63.2-201ENST00000362603 126 ntBASIC-0.25□□□□□ -2.45
SHROOM3Q8TF72 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.25□□□□□ -2.45
SHROOM3Q8TF72 SNORD116-10-201ENST00000363791 102 ntBASIC-0.25□□□□□ -2.45
SHROOM3Q8TF72 SNORD116-14-201ENST00000383894 92 ntBASIC-0.25□□□□□ -2.45
SHROOM3Q8TF72 SNORD116-17-201ENST00000383929 92 ntBASIC-0.25□□□□□ -2.45
SHROOM3Q8TF72 SNORD116-15-201ENST00000384445 92 ntBASIC-0.25□□□□□ -2.45
SHROOM3Q8TF72 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.25□□□□□ -2.45
SHROOM3Q8TF72 SNORD116-19-201ENST00000384729 92 ntBASIC-0.25□□□□□ -2.45
SHROOM3Q8TF72 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.25□□□□□ -2.45
SHROOM3Q8TF72 MIR548E-201ENST00000408287 88 ntBASIC-0.25□□□□□ -2.45
SHROOM3Q8TF72 AC097510.1-201ENST00000510945 133 ntBASIC-0.25□□□□□ -2.45
SHROOM3Q8TF72 RNU6-659P-201ENST00000516454 104 ntBASIC-0.25□□□□□ -2.45
SHROOM3Q8TF72 MIR4777-201ENST00000583710 86 ntBASIC-0.25□□□□□ -2.45
SHROOM3Q8TF72 SNORD4B-201ENST00000459083 72 ntBASIC-0.26□□□□□ -2.45
SHROOM3Q8TF72 RNU6-320P-201ENST00000516511 106 ntBASIC-0.26□□□□□ -2.45
SHROOM3Q8TF72 MIR3133-201ENST00000583157 78 ntBASIC-0.26□□□□□ -2.45
SHROOM3Q8TF72 MIR4439-201ENST00000583746 80 ntBASIC-0.26□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 232 ms