Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 MIR4696-201ENST00000581431 70 ntBASIC0.74□□□□□ -2.29
SNED1Q8TER0 uc_338.16-201ENST00000621804 95 ntBASIC0.74□□□□□ -2.29
SNED1Q8TER0 SNORA63.2-201ENST00000362603 126 ntBASIC0.73□□□□□ -2.29
SNED1Q8TER0 RNU6-161P-201ENST00000363051 106 ntBASIC0.73□□□□□ -2.29
SNED1Q8TER0 Y_RNA.174-201ENST00000363781 105 ntBASIC0.73□□□□□ -2.29
SNED1Q8TER0 SNORD101-201ENST00000384027 73 ntBASIC0.73□□□□□ -2.29
SNED1Q8TER0 MIR608-201ENST00000384820 100 ntBASIC0.73□□□□□ -2.29
SNED1Q8TER0 MIR942-201ENST00000401111 86 ntBASIC0.73□□□□□ -2.29
SNED1Q8TER0 Y_RNA.596-201ENST00000410462 109 ntBASIC0.73□□□□□ -2.29
SNED1Q8TER0 SNORD124-201ENST00000459577 104 ntBASIC0.73□□□□□ -2.29
SNED1Q8TER0 U6.100-201ENST00000636230 99 ntBASIC0.73□□□□□ -2.29
SNED1Q8TER0 SNORD105-201ENST00000386910 85 ntBASIC0.72□□□□□ -2.29
SNED1Q8TER0 AC244505.6-201ENST00000452829 130 ntBASIC0.72□□□□□ -2.29
SNED1Q8TER0 MIR4662A-201ENST00000637499 67 ntBASIC0.72□□□□□ -2.29
SNED1Q8TER0 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.72□□□□□ -2.29
SNED1Q8TER0 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
SNED1Q8TER0 Y_RNA.32-201ENST00000362589 110 ntBASIC0.72□□□□□ -2.29
SNED1Q8TER0 SNORD115-24-201ENST00000363528 82 ntBASIC0.72□□□□□ -2.29
SNED1Q8TER0 RNU6-478P-201ENST00000363904 110 ntBASIC0.72□□□□□ -2.29
SNED1Q8TER0 MIR146A-201ENST00000385201 99 ntBASIC0.72□□□□□ -2.29
SNED1Q8TER0 RNU6-1052P-201ENST00000411398 104 ntBASIC0.72□□□□□ -2.29
SNED1Q8TER0 AC002350.1-201ENST00000490759 375 ntBASIC0.72□□□□□ -2.29
SNED1Q8TER0 PSMC1P5-201ENST00000512850 177 ntBASIC0.72□□□□□ -2.29
SNED1Q8TER0 RNU6-719P-201ENST00000516671 104 ntBASIC0.72□□□□□ -2.29
SNED1Q8TER0 MIR4712-201ENST00000583750 82 ntBASIC0.72□□□□□ -2.29
SNED1Q8TER0 RNU6-1094P-201ENST00000362416 104 ntBASIC0.71□□□□□ -2.3
SNED1Q8TER0 RNU6-315P-201ENST00000362666 107 ntBASIC0.71□□□□□ -2.3
SNED1Q8TER0 RNU6-686P-201ENST00000364839 107 ntBASIC0.71□□□□□ -2.3
SNED1Q8TER0 RNY4P3-201ENST00000365254 95 ntBASIC0.71□□□□□ -2.3
SNED1Q8TER0 RNU6-1051P-201ENST00000365471 102 ntBASIC0.71□□□□□ -2.3
SNED1Q8TER0 MIR644A-201ENST00000385262 94 ntBASIC0.71□□□□□ -2.3
SNED1Q8TER0 RNU6-380P-201ENST00000410207 107 ntBASIC0.71□□□□□ -2.3
SNED1Q8TER0 RNU6-1108P-201ENST00000516308 104 ntBASIC0.71□□□□□ -2.3
SNED1Q8TER0 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.71□□□□□ -2.3
SNED1Q8TER0 Y_RNA.207-201ENST00000364142 106 ntBASIC0.7□□□□□ -2.3
SNED1Q8TER0 SNORD90-201ENST00000391145 111 ntBASIC0.7□□□□□ -2.3
SNED1Q8TER0 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.7□□□□□ -2.3
SNED1Q8TER0 snoU13.17-201ENST00000458802 104 ntBASIC0.7□□□□□ -2.3
SNED1Q8TER0 RNU6-287P-201ENST00000516230 98 ntBASIC0.7□□□□□ -2.3
SNED1Q8TER0 RNU6-557P-201ENST00000516842 110 ntBASIC0.7□□□□□ -2.3
SNED1Q8TER0 RNU6-1057P-201ENST00000517162 102 ntBASIC0.7□□□□□ -2.3
SNED1Q8TER0 MTRNR2L2-201ENST00000604882 87 ntBASIC0.7□□□□□ -2.3
SNED1Q8TER0 RNU6-208P-201ENST00000362431 107 ntBASIC0.69□□□□□ -2.3
SNED1Q8TER0 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.69□□□□□ -2.3
SNED1Q8TER0 SNORD77.2-201ENST00000391045 68 ntBASIC0.69□□□□□ -2.3
SNED1Q8TER0 FGF7P7-201ENST00000514120 227 ntBASIC0.69□□□□□ -2.3
SNED1Q8TER0 Y_RNA.660-201ENST00000516002 120 ntBASIC0.69□□□□□ -2.3
SNED1Q8TER0 RNU6-469P-201ENST00000516253 101 ntBASIC0.69□□□□□ -2.3
SNED1Q8TER0 RNU7-13P-201ENST00000516413 62 ntBASIC0.69□□□□□ -2.3
SNED1Q8TER0 RNA5SP285-201ENST00000516619 119 ntBASIC0.69□□□□□ -2.3
SNED1Q8TER0 AC025627.3-201ENST00000582078 182 ntBASIC0.69□□□□□ -2.3
SNED1Q8TER0 MIR3140-201ENST00000583685 90 ntBASIC0.69□□□□□ -2.3
SNED1Q8TER0 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.68□□□□□ -2.3
SNED1Q8TER0 MIRLET7A1-201ENST00000362295 80 ntBASIC0.68□□□□□ -2.3
SNED1Q8TER0 RNU6-776P-201ENST00000364403 104 ntBASIC0.68□□□□□ -2.3
SNED1Q8TER0 Y_RNA.264-201ENST00000364665 102 ntBASIC0.68□□□□□ -2.3
SNED1Q8TER0 RNU6-1022P-201ENST00000365049 104 ntBASIC0.68□□□□□ -2.3
SNED1Q8TER0 RNU6-1265P-201ENST00000516342 103 ntBASIC0.68□□□□□ -2.3
SNED1Q8TER0 U7.4-201ENST00000614961 63 ntBASIC0.68□□□□□ -2.3
SNED1Q8TER0 RNA5SP403-201ENST00000363598 108 ntBASIC0.67□□□□□ -2.3
SNED1Q8TER0 SNORD115-44-201ENST00000365391 82 ntBASIC0.67□□□□□ -2.3
SNED1Q8TER0 RNU6-935P-201ENST00000410371 100 ntBASIC0.67□□□□□ -2.3
SNED1Q8TER0 RNU7-104P-201ENST00000459398 79 ntBASIC0.67□□□□□ -2.3
SNED1Q8TER0 RNU7-161P-201ENST00000517289 62 ntBASIC0.67□□□□□ -2.3
SNED1Q8TER0 AC067863.3-201ENST00000624172 122 ntBASIC0.67□□□□□ -2.3
SNED1Q8TER0 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
SNED1Q8TER0 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.66□□□□□ -2.3
SNED1Q8TER0 RNU5F-1-201ENST00000362507 117 ntBASIC0.66□□□□□ -2.3
SNED1Q8TER0 RNU6-1335P-201ENST00000365426 107 ntBASIC0.66□□□□□ -2.3
SNED1Q8TER0 Y_RNA.371-201ENST00000365591 113 ntBASIC0.66□□□□□ -2.3
SNED1Q8TER0 RNU6-110P-201ENST00000384508 104 ntBASIC0.66□□□□□ -2.3
SNED1Q8TER0 MIR451A-201ENST00000385059 72 ntBASIC0.66□□□□□ -2.3
SNED1Q8TER0 MIR889-201ENST00000401280 79 ntBASIC0.66□□□□□ -2.3
SNED1Q8TER0 MIR1265-201ENST00000408444 86 ntBASIC0.66□□□□□ -2.3
SNED1Q8TER0 RNA5SP255-201ENST00000516370 107 ntBASIC0.66□□□□□ -2.3
SNED1Q8TER0 RNU6-135P-201ENST00000516769 101 ntBASIC0.66□□□□□ -2.3
SNED1Q8TER0 MIR3678-201ENST00000578455 94 ntBASIC0.66□□□□□ -2.3
SNED1Q8TER0 MIR3612-201ENST00000579753 87 ntBASIC0.66□□□□□ -2.3
SNED1Q8TER0 YWHAEP2-201ENST00000580066 112 ntBASIC0.66□□□□□ -2.3
SNED1Q8TER0 MIR3920-201ENST00000581751 86 ntBASIC0.66□□□□□ -2.3
SNED1Q8TER0 YWHAEP3-201ENST00000582767 121 ntBASIC0.66□□□□□ -2.3
SNED1Q8TER0 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.66□□□□□ -2.3
SNED1Q8TER0 AC244669.1-204ENST00000621564 178 ntBASIC0.66□□□□□ -2.3
SNED1Q8TER0 Y_RNA.12-201ENST00000362393 112 ntBASIC0.65□□□□□ -2.3
SNED1Q8TER0 SNORD28-201ENST00000384706 75 ntBASIC0.65□□□□□ -2.3
SNED1Q8TER0 AC145423.2-201ENST00000610631 239 ntBASIC0.65□□□□□ -2.3
SNED1Q8TER0 RNU6-1229P-201ENST00000364295 107 ntBASIC0.64□□□□□ -2.31
SNED1Q8TER0 RNU6-1296P-201ENST00000383879 107 ntBASIC0.64□□□□□ -2.31
SNED1Q8TER0 MIR573-201ENST00000384964 99 ntBASIC0.64□□□□□ -2.31
SNED1Q8TER0 U3.27-201ENST00000391237 200 ntBASIC0.64□□□□□ -2.31
SNED1Q8TER0 MIR548L-201ENST00000408303 86 ntBASIC0.64□□□□□ -2.31
SNED1Q8TER0 SNORD99-201ENST00000408612 74 ntBASIC0.64□□□□□ -2.31
SNED1Q8TER0 MIR2113-201ENST00000459007 91 ntBASIC0.64□□□□□ -2.31
SNED1Q8TER0 RNU6-229P-201ENST00000516614 102 ntBASIC0.64□□□□□ -2.31
SNED1Q8TER0 RNU6-807P-201ENST00000516805 107 ntBASIC0.64□□□□□ -2.31
SNED1Q8TER0 AC011195.1-201ENST00000578177 177 ntBASIC0.64□□□□□ -2.31
SNED1Q8TER0 MIR4639-201ENST00000584938 69 ntBASIC0.64□□□□□ -2.31
SNED1Q8TER0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
SNED1Q8TER0 RNU6-1126P-201ENST00000384002 107 ntBASIC0.64□□□□□ -2.31
SNED1Q8TER0 AC097510.1-201ENST00000510945 133 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 177.3 ms