Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.46□□□□□ -2.64
CLDND2Q8NHS1 MIR1263-201ENST00000408324 86 ntBASIC-1.46□□□□□ -2.64
CLDND2Q8NHS1 RNA5SP136-201ENST00000410906 107 ntBASIC-1.46□□□□□ -2.64
CLDND2Q8NHS1 RNU7-121P-201ENST00000516604 62 ntBASIC-1.46□□□□□ -2.64
CLDND2Q8NHS1 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.46□□□□□ -2.64
CLDND2Q8NHS1 MIR4723-201ENST00000585070 81 ntBASIC-1.46□□□□□ -2.64
CLDND2Q8NHS1 AC025521.1-201ENST00000621624 286 ntBASIC-1.46□□□□□ -2.64
CLDND2Q8NHS1 SNORA63.2-201ENST00000362603 126 ntBASIC-1.47□□□□□ -2.64
CLDND2Q8NHS1 SNORD58.1-201ENST00000391313 66 ntBASIC-1.47□□□□□ -2.64
CLDND2Q8NHS1 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.47□□□□□ -2.64
CLDND2Q8NHS1 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.47□□□□□ -2.64
CLDND2Q8NHS1 AC130289.1-201ENST00000577321 73 ntBASIC-1.47□□□□□ -2.64
CLDND2Q8NHS1 AL353803.5-201ENST00000599815 141 ntBASIC-1.47□□□□□ -2.64
CLDND2Q8NHS1 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.47□□□□□ -2.64
CLDND2Q8NHS1 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.48□□□□□ -2.65
CLDND2Q8NHS1 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.49□□□□□ -2.65
CLDND2Q8NHS1 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.49□□□□□ -2.65
CLDND2Q8NHS1 MIR4464-201ENST00000580818 92 ntBASIC-1.49□□□□□ -2.65
CLDND2Q8NHS1 MIR3140-201ENST00000583685 90 ntBASIC-1.49□□□□□ -2.65
CLDND2Q8NHS1 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.49□□□□□ -2.65
CLDND2Q8NHS1 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.5□□□□□ -2.65
CLDND2Q8NHS1 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.5□□□□□ -2.65
CLDND2Q8NHS1 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.5□□□□□ -2.65
CLDND2Q8NHS1 SNORD50.2-201ENST00000365465 70 ntBASIC-1.5□□□□□ -2.65
CLDND2Q8NHS1 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.5□□□□□ -2.65
CLDND2Q8NHS1 RNA5SP461-201ENST00000516451 104 ntBASIC-1.5□□□□□ -2.65
CLDND2Q8NHS1 MIR548U-201ENST00000390728 81 ntBASIC-1.51□□□□□ -2.65
CLDND2Q8NHS1 RNU6-816P-201ENST00000390914 107 ntBASIC-1.51□□□□□ -2.65
CLDND2Q8NHS1 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.51□□□□□ -2.65
CLDND2Q8NHS1 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.51□□□□□ -2.65
CLDND2Q8NHS1 RNU7-85P-201ENST00000458851 63 ntBASIC-1.51□□□□□ -2.65
CLDND2Q8NHS1 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.51□□□□□ -2.65
CLDND2Q8NHS1 RNU4-71P-201ENST00000516258 113 ntBASIC-1.51□□□□□ -2.65
CLDND2Q8NHS1 MIR6888-201ENST00000621977 67 ntBASIC-1.51□□□□□ -2.65
CLDND2Q8NHS1 AC090617.8-201ENST00000623339 167 ntBASIC-1.51□□□□□ -2.65
CLDND2Q8NHS1 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.52□□□□□ -2.65
CLDND2Q8NHS1 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.52□□□□□ -2.65
CLDND2Q8NHS1 RNU6-132P-201ENST00000383863 107 ntBASIC-1.52□□□□□ -2.65
CLDND2Q8NHS1 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.52□□□□□ -2.65
CLDND2Q8NHS1 AL445584.3-201ENST00000617173 78 ntBASIC-1.52□□□□□ -2.65
CLDND2Q8NHS1 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.53□□□□□ -2.65
CLDND2Q8NHS1 RNU6-915P-201ENST00000364943 103 ntBASIC-1.53□□□□□ -2.65
CLDND2Q8NHS1 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.53□□□□□ -2.65
CLDND2Q8NHS1 MIR548A1-201ENST00000385041 97 ntBASIC-1.53□□□□□ -2.65
CLDND2Q8NHS1 SNORD75.2-201ENST00000408784 58 ntBASIC-1.53□□□□□ -2.65
CLDND2Q8NHS1 RNU7-24P-201ENST00000458867 62 ntBASIC-1.53□□□□□ -2.65
CLDND2Q8NHS1 AC132825.6-201ENST00000638861 357 ntBASIC-1.53□□□□□ -2.65
CLDND2Q8NHS1 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.54□□□□□ -2.66
CLDND2Q8NHS1 RNY4P6-201ENST00000363667 96 ntBASIC-1.54□□□□□ -2.66
CLDND2Q8NHS1 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.54□□□□□ -2.66
CLDND2Q8NHS1 RNU6-460P-201ENST00000391158 108 ntBASIC-1.54□□□□□ -2.66
CLDND2Q8NHS1 HLA-S-202ENST00000425174 53 ntBASIC-1.54□□□□□ -2.66
CLDND2Q8NHS1 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.54□□□□□ -2.66
CLDND2Q8NHS1 AC068339.1-201ENST00000526965 141 ntBASIC-1.54□□□□□ -2.66
CLDND2Q8NHS1 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.54□□□□□ -2.66
CLDND2Q8NHS1 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.54□□□□□ -2.66
CLDND2Q8NHS1 RNU6-924P-201ENST00000362926 108 ntBASIC-1.55□□□□□ -2.66
CLDND2Q8NHS1 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.55□□□□□ -2.66
CLDND2Q8NHS1 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.55□□□□□ -2.66
CLDND2Q8NHS1 AL513043.2-201ENST00000573941 143 ntBASIC-1.55□□□□□ -2.66
CLDND2Q8NHS1 MIR3064-201ENST00000581130 66 ntBASIC-1.55□□□□□ -2.66
CLDND2Q8NHS1 AC138207.3-201ENST00000585289 166 ntBASIC-1.55□□□□□ -2.66
CLDND2Q8NHS1 RNU4-11P-201ENST00000365287 132 ntBASIC-1.56□□□□□ -2.66
CLDND2Q8NHS1 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.56□□□□□ -2.66
CLDND2Q8NHS1 SNORA24B-201ENST00000384176 131 ntBASIC-1.56□□□□□ -2.66
CLDND2Q8NHS1 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.56□□□□□ -2.66
CLDND2Q8NHS1 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.56□□□□□ -2.66
CLDND2Q8NHS1 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.56□□□□□ -2.66
CLDND2Q8NHS1 AC022559.1-201ENST00000520905 205 ntBASIC-1.56□□□□□ -2.66
CLDND2Q8NHS1 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.57□□□□□ -2.66
CLDND2Q8NHS1 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.58□□□□□ -2.66
CLDND2Q8NHS1 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.58□□□□□ -2.66
CLDND2Q8NHS1 MIR577-201ENST00000385196 96 ntBASIC-1.58□□□□□ -2.66
CLDND2Q8NHS1 MIR548F4-201ENST00000408515 105 ntBASIC-1.58□□□□□ -2.66
CLDND2Q8NHS1 MIR1255B2-201ENST00000408618 67 ntBASIC-1.58□□□□□ -2.66
CLDND2Q8NHS1 RNU7-197P-201ENST00000458836 62 ntBASIC-1.58□□□□□ -2.66
CLDND2Q8NHS1 RNU6-479P-201ENST00000516348 105 ntBASIC-1.58□□□□□ -2.66
CLDND2Q8NHS1 MIR4801-201ENST00000582704 82 ntBASIC-1.58□□□□□ -2.66
CLDND2Q8NHS1 AC104996.3-201ENST00000590718 94 ntBASIC-1.58□□□□□ -2.66
CLDND2Q8NHS1 U4.2-201ENST00000618561 85 ntBASIC-1.58□□□□□ -2.66
CLDND2Q8NHS1 SNORD115-33-201ENST00000363723 82 ntBASIC-1.59□□□□□ -2.66
CLDND2Q8NHS1 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.59□□□□□ -2.66
CLDND2Q8NHS1 RNU6-260P-201ENST00000384092 107 ntBASIC-1.59□□□□□ -2.66
CLDND2Q8NHS1 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.59□□□□□ -2.66
CLDND2Q8NHS1 RNA5SP180-201ENST00000516181 101 ntBASIC-1.59□□□□□ -2.66
CLDND2Q8NHS1 AC026421.1-201ENST00000519101 163 ntBASIC-1.59□□□□□ -2.66
CLDND2Q8NHS1 AC006254.2-201ENST00000603259 279 ntBASIC-1.59□□□□□ -2.66
CLDND2Q8NHS1 MIR365A-201ENST00000362260 87 ntBASIC-1.6□□□□□ -2.67
CLDND2Q8NHS1 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.6□□□□□ -2.67
CLDND2Q8NHS1 SNORA33.1-201ENST00000364957 130 ntBASIC-1.6□□□□□ -2.67
CLDND2Q8NHS1 RNU6-746P-201ENST00000384112 109 ntBASIC-1.6□□□□□ -2.67
CLDND2Q8NHS1 RNU6-576P-201ENST00000390854 102 ntBASIC-1.6□□□□□ -2.67
CLDND2Q8NHS1 SNORA26.4-201ENST00000391188 123 ntBASIC-1.6□□□□□ -2.67
CLDND2Q8NHS1 RNU4-61P-201ENST00000411243 107 ntBASIC-1.6□□□□□ -2.67
CLDND2Q8NHS1 MTCYBP6-201ENST00000441810 138 ntBASIC-1.6□□□□□ -2.67
CLDND2Q8NHS1 snoU13.17-201ENST00000458802 104 ntBASIC-1.6□□□□□ -2.67
CLDND2Q8NHS1 RNU7-134P-201ENST00000458997 64 ntBASIC-1.6□□□□□ -2.67
CLDND2Q8NHS1 SNORD63.1-201ENST00000516178 80 ntBASIC-1.6□□□□□ -2.67
CLDND2Q8NHS1 RNA5SP147-201ENST00000516493 109 ntBASIC-1.6□□□□□ -2.67
CLDND2Q8NHS1 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.61□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 218.9 ms