Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 MIR520E-201ENST00000384867 87 ntBASIC1.42□□□□□ -2.18
SIX5Q8N196 SNORD99-201ENST00000408612 74 ntBASIC1.42□□□□□ -2.18
SIX5Q8N196 RPS29P1-201ENST00000465274 159 ntBASIC1.42□□□□□ -2.18
SIX5Q8N196 RNU6-70P-201ENST00000516438 60 ntBASIC1.42□□□□□ -2.18
SIX5Q8N196 MIR548AG2-201ENST00000581228 64 ntBASIC1.42□□□□□ -2.18
SIX5Q8N196 PVT1_3.1-201ENST00000620853 95 ntBASIC1.42□□□□□ -2.18
SIX5Q8N196 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.42□□□□□ -2.18
SIX5Q8N196 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SIX5Q8N196 MIR150-201ENST00000385048 84 ntBASIC1.41□□□□□ -2.18
SIX5Q8N196 AC074348.1-201ENST00000426503 132 ntBASIC1.41□□□□□ -2.18
SIX5Q8N196 MIR3134-201ENST00000579433 74 ntBASIC1.41□□□□□ -2.18
SIX5Q8N196 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.41□□□□□ -2.18
SIX5Q8N196 SNORA8.1-201ENST00000384250 140 ntBASIC1.4□□□□□ -2.19
SIX5Q8N196 RNU6-274P-201ENST00000459566 107 ntBASIC1.4□□□□□ -2.19
SIX5Q8N196 Y_RNA.36-201ENST00000362602 112 ntBASIC1.39□□□□□ -2.19
SIX5Q8N196 RNU6-716P-201ENST00000365621 103 ntBASIC1.39□□□□□ -2.19
SIX5Q8N196 RNU6-939P-201ENST00000384634 107 ntBASIC1.39□□□□□ -2.19
SIX5Q8N196 Y_RNA.606-201ENST00000410579 103 ntBASIC1.39□□□□□ -2.19
SIX5Q8N196 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.39□□□□□ -2.19
SIX5Q8N196 RNU6-1223P-201ENST00000517124 104 ntBASIC1.39□□□□□ -2.19
SIX5Q8N196 RNA5SP47-201ENST00000517230 109 ntBASIC1.39□□□□□ -2.19
SIX5Q8N196 U6.81-201ENST00000612550 106 ntBASIC1.39□□□□□ -2.19
SIX5Q8N196 RNU6-824P-201ENST00000363724 104 ntBASIC1.38□□□□□ -2.19
SIX5Q8N196 RNU4-45P-201ENST00000365469 141 ntBASIC1.38□□□□□ -2.19
SIX5Q8N196 MIR598-201ENST00000384868 97 ntBASIC1.38□□□□□ -2.19
SIX5Q8N196 MIR519E-201ENST00000385075 84 ntBASIC1.38□□□□□ -2.19
SIX5Q8N196 MIR4773-1-201ENST00000637203 78 ntBASIC1.38□□□□□ -2.19
SIX5Q8N196 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.38□□□□□ -2.19
SIX5Q8N196 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
SIX5Q8N196 RNU6-154P-201ENST00000384306 106 ntBASIC1.37□□□□□ -2.19
SIX5Q8N196 SCARNA16.5-201ENST00000517114 183 ntBASIC1.37□□□□□ -2.19
SIX5Q8N196 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.37□□□□□ -2.19
SIX5Q8N196 SNORD41.1-201ENST00000391000 69 ntBASIC1.36□□□□□ -2.19
SIX5Q8N196 RNU6-871P-201ENST00000516122 100 ntBASIC1.36□□□□□ -2.19
SIX5Q8N196 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.36□□□□□ -2.19
SIX5Q8N196 MIR151B-201ENST00000584249 96 ntBASIC1.36□□□□□ -2.19
SIX5Q8N196 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.36□□□□□ -2.19
SIX5Q8N196 MIR6788-201ENST00000618842 66 ntBASIC1.36□□□□□ -2.19
SIX5Q8N196 MIR320A-201ENST00000385302 82 ntBASIC1.35□□□□□ -2.19
SIX5Q8N196 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
SIX5Q8N196 SNORA40.6-201ENST00000391153 128 ntBASIC1.35□□□□□ -2.19
SIX5Q8N196 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.35□□□□□ -2.19
SIX5Q8N196 MIR18A-201ENST00000362310 71 ntBASIC1.34□□□□□ -2.19
SIX5Q8N196 RNU6-726P-201ENST00000364680 107 ntBASIC1.34□□□□□ -2.19
SIX5Q8N196 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.34□□□□□ -2.19
SIX5Q8N196 MIR548J-201ENST00000408833 112 ntBASIC1.34□□□□□ -2.19
SIX5Q8N196 AC244098.3-201ENST00000424803 96 ntBASIC1.34□□□□□ -2.19
SIX5Q8N196 MIR3660-201ENST00000584845 100 ntBASIC1.34□□□□□ -2.19
SIX5Q8N196 RNA5SP222-201ENST00000411039 105 ntBASIC1.33□□□□□ -2.2
SIX5Q8N196 RNA5SP227-201ENST00000516184 113 ntBASIC1.33□□□□□ -2.2
SIX5Q8N196 MIR3675-201ENST00000583661 73 ntBASIC1.33□□□□□ -2.2
SIX5Q8N196 RNU6-382P-201ENST00000365181 106 ntBASIC1.32□□□□□ -2.2
SIX5Q8N196 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.31□□□□□ -2.2
SIX5Q8N196 RNU6-330P-201ENST00000363015 107 ntBASIC1.31□□□□□ -2.2
SIX5Q8N196 MIR154-201ENST00000385243 84 ntBASIC1.31□□□□□ -2.2
SIX5Q8N196 MIR4460-201ENST00000577862 86 ntBASIC1.31□□□□□ -2.2
SIX5Q8N196 MIR4661-201ENST00000582720 75 ntBASIC1.31□□□□□ -2.2
SIX5Q8N196 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
SIX5Q8N196 MIR548O2-201ENST00000616090 70 ntBASIC1.31□□□□□ -2.2
SIX5Q8N196 MIR664A-201ENST00000626086 82 ntBASIC1.31□□□□□ -2.2
SIX5Q8N196 RNU6-587P-201ENST00000391282 106 ntBASIC1.3□□□□□ -2.2
SIX5Q8N196 SNORD75.2-201ENST00000408784 58 ntBASIC1.3□□□□□ -2.2
SIX5Q8N196 RNU6-752P-201ENST00000516376 102 ntBASIC1.3□□□□□ -2.2
SIX5Q8N196 RNU6-1015P-201ENST00000517121 99 ntBASIC1.3□□□□□ -2.2
SIX5Q8N196 MIR6767-201ENST00000637302 66 ntBASIC1.3□□□□□ -2.2
SIX5Q8N196 Y_RNA.205-201ENST00000364128 113 ntBASIC1.29□□□□□ -2.2
SIX5Q8N196 AL691482.2-201ENST00000457453 84 ntBASIC1.29□□□□□ -2.2
SIX5Q8N196 AL353765.1-201ENST00000605514 183 ntBASIC1.29□□□□□ -2.2
SIX5Q8N196 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
SIX5Q8N196 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
SIX5Q8N196 Y_RNA.258-201ENST00000364613 105 ntBASIC1.28□□□□□ -2.2
SIX5Q8N196 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.28□□□□□ -2.2
SIX5Q8N196 OR2A41P-201ENST00000473586 105 ntBASIC1.28□□□□□ -2.2
SIX5Q8N196 RNU6V-201ENST00000384105 107 ntBASIC1.27□□□□□ -2.21
SIX5Q8N196 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.27□□□□□ -2.21
SIX5Q8N196 RNA5SP61-201ENST00000516453 100 ntBASIC1.27□□□□□ -2.21
SIX5Q8N196 RNU6-54P-201ENST00000365563 107 ntBASIC1.26□□□□□ -2.21
SIX5Q8N196 RNU6-1241P-201ENST00000384536 107 ntBASIC1.26□□□□□ -2.21
SIX5Q8N196 RNU6-523P-201ENST00000516304 54 ntBASIC1.26□□□□□ -2.21
SIX5Q8N196 RNA5SP268-201ENST00000516828 124 ntBASIC1.26□□□□□ -2.21
SIX5Q8N196 SNORA36.2-201ENST00000384004 127 ntBASIC1.25□□□□□ -2.21
SIX5Q8N196 SNORA8.2-201ENST00000384372 139 ntBASIC1.25□□□□□ -2.21
SIX5Q8N196 RNU6-269P-201ENST00000391077 97 ntBASIC1.25□□□□□ -2.21
SIX5Q8N196 RNU7-24P-201ENST00000458867 62 ntBASIC1.25□□□□□ -2.21
SIX5Q8N196 RNU6-687P-201ENST00000516443 89 ntBASIC1.25□□□□□ -2.21
SIX5Q8N196 RNA5SP94-201ENST00000516917 108 ntBASIC1.25□□□□□ -2.21
SIX5Q8N196 MIR6828-201ENST00000636181 60 ntBASIC1.25□□□□□ -2.21
SIX5Q8N196 RNU6-495P-201ENST00000362995 107 ntBASIC1.24□□□□□ -2.21
SIX5Q8N196 RNU1-141P-201ENST00000364623 158 ntBASIC1.24□□□□□ -2.21
SIX5Q8N196 MT-TY-201ENST00000387409 66 ntBASIC1.24□□□□□ -2.21
SIX5Q8N196 AC087343.1-201ENST00000477341 475 ntBASIC1.24□□□□□ -2.21
SIX5Q8N196 RNA5SP436-201ENST00000516020 115 ntBASIC1.24□□□□□ -2.21
SIX5Q8N196 MIR4295-201ENST00000585286 85 ntBASIC1.24□□□□□ -2.21
SIX5Q8N196 AC093423.1-201ENST00000440817 142 ntBASIC1.23□□□□□ -2.21
SIX5Q8N196 RNU6-634P-201ENST00000459134 106 ntBASIC1.23□□□□□ -2.21
SIX5Q8N196 NAMPTP3-201ENST00000569273 224 ntBASIC1.23□□□□□ -2.21
SIX5Q8N196 AC114801.3-201ENST00000510231 177 ntBASIC1.22□□□□□ -2.21
SIX5Q8N196 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.22□□□□□ -2.21
SIX5Q8N196 AC073869.9-201ENST00000641610 120 ntBASIC1.22□□□□□ -2.21
SIX5Q8N196 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 710.8 ms