Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC211469.2-201ENST00000605461 205 ntBASIC0.9□□□□□ -2.27
TRIM48Q8IWZ4 RNU4-45P-201ENST00000365469 141 ntBASIC0.89□□□□□ -2.27
TRIM48Q8IWZ4 Y_RNA.371-201ENST00000365591 113 ntBASIC0.89□□□□□ -2.27
TRIM48Q8IWZ4 RNU6-24P-201ENST00000384440 107 ntBASIC0.89□□□□□ -2.27
TRIM48Q8IWZ4 RNU6-269P-201ENST00000391077 97 ntBASIC0.89□□□□□ -2.27
TRIM48Q8IWZ4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.89□□□□□ -2.27
TRIM48Q8IWZ4 MIR6828-201ENST00000636181 60 ntBASIC0.89□□□□□ -2.27
TRIM48Q8IWZ4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
TRIM48Q8IWZ4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
TRIM48Q8IWZ4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
TRIM48Q8IWZ4 Y_RNA.12-201ENST00000362393 112 ntBASIC0.88□□□□□ -2.27
TRIM48Q8IWZ4 SNORA24B-201ENST00000384176 131 ntBASIC0.88□□□□□ -2.27
TRIM48Q8IWZ4 RNA5SP220-201ENST00000516298 104 ntBASIC0.88□□□□□ -2.27
TRIM48Q8IWZ4 Y_RNA.264-201ENST00000364665 102 ntBASIC0.87□□□□□ -2.27
TRIM48Q8IWZ4 U3.27-201ENST00000391237 200 ntBASIC0.87□□□□□ -2.27
TRIM48Q8IWZ4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.87□□□□□ -2.27
TRIM48Q8IWZ4 Y_RNA.660-201ENST00000516002 120 ntBASIC0.87□□□□□ -2.27
TRIM48Q8IWZ4 MIR4484-201ENST00000582855 83 ntBASIC0.87□□□□□ -2.27
TRIM48Q8IWZ4 MIR6734-201ENST00000621166 68 ntBASIC0.87□□□□□ -2.27
TRIM48Q8IWZ4 RNU6-1094P-201ENST00000362416 104 ntBASIC0.86□□□□□ -2.27
TRIM48Q8IWZ4 RNA5SP517-201ENST00000364724 117 ntBASIC0.86□□□□□ -2.27
TRIM48Q8IWZ4 MIR140-201ENST00000385282 100 ntBASIC0.86□□□□□ -2.27
TRIM48Q8IWZ4 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
TRIM48Q8IWZ4 RNU7-74P-201ENST00000459104 62 ntBASIC0.86□□□□□ -2.27
TRIM48Q8IWZ4 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
TRIM48Q8IWZ4 PSMC1P5-201ENST00000512850 177 ntBASIC0.86□□□□□ -2.27
TRIM48Q8IWZ4 MIR4698-201ENST00000577795 80 ntBASIC0.86□□□□□ -2.27
TRIM48Q8IWZ4 MIR7107-201ENST00000611489 80 ntBASIC0.86□□□□□ -2.27
TRIM48Q8IWZ4 RNU6-824P-201ENST00000363724 104 ntBASIC0.85□□□□□ -2.27
TRIM48Q8IWZ4 Y_RNA.532-201ENST00000384590 113 ntBASIC0.85□□□□□ -2.27
TRIM48Q8IWZ4 RNU6-1177P-201ENST00000391058 104 ntBASIC0.85□□□□□ -2.27
TRIM48Q8IWZ4 MIR889-201ENST00000401280 79 ntBASIC0.85□□□□□ -2.27
TRIM48Q8IWZ4 RNU6-42P-201ENST00000384165 107 ntBASIC0.84□□□□□ -2.27
TRIM48Q8IWZ4 SNORA8.2-201ENST00000384372 139 ntBASIC0.84□□□□□ -2.27
TRIM48Q8IWZ4 RNA5SP484-201ENST00000458857 111 ntBASIC0.84□□□□□ -2.27
TRIM48Q8IWZ4 AC097510.1-201ENST00000510945 133 ntBASIC0.84□□□□□ -2.27
TRIM48Q8IWZ4 MIR3973-201ENST00000579824 107 ntBASIC0.84□□□□□ -2.27
TRIM48Q8IWZ4 YWHAEP2-201ENST00000580066 112 ntBASIC0.84□□□□□ -2.27
TRIM48Q8IWZ4 YWHAEP3-201ENST00000582767 121 ntBASIC0.84□□□□□ -2.27
TRIM48Q8IWZ4 MIR151B-201ENST00000584249 96 ntBASIC0.84□□□□□ -2.27
TRIM48Q8IWZ4 Y_RNA.258-201ENST00000364613 105 ntBASIC0.83□□□□□ -2.28
TRIM48Q8IWZ4 RNU1-141P-201ENST00000364623 158 ntBASIC0.83□□□□□ -2.28
TRIM48Q8IWZ4 Y_RNA.355-201ENST00000365462 98 ntBASIC0.83□□□□□ -2.28
TRIM48Q8IWZ4 AC093423.1-201ENST00000440817 142 ntBASIC0.83□□□□□ -2.28
TRIM48Q8IWZ4 MIR4460-201ENST00000577862 86 ntBASIC0.83□□□□□ -2.28
TRIM48Q8IWZ4 MIR4752-201ENST00000579672 72 ntBASIC0.83□□□□□ -2.28
TRIM48Q8IWZ4 SNORA25.18-201ENST00000607153 114 ntBASIC0.83□□□□□ -2.28
TRIM48Q8IWZ4 MIR548O2-201ENST00000616090 70 ntBASIC0.83□□□□□ -2.28
TRIM48Q8IWZ4 MIR6788-201ENST00000618842 66 ntBASIC0.83□□□□□ -2.28
TRIM48Q8IWZ4 AC092634.7-201ENST00000621022 103 ntBASIC0.83□□□□□ -2.28
TRIM48Q8IWZ4 AL162376.1-201ENST00000624117 175 ntBASIC0.83□□□□□ -2.28
TRIM48Q8IWZ4 MIR4773-1-201ENST00000637203 78 ntBASIC0.83□□□□□ -2.28
TRIM48Q8IWZ4 MIR373-201ENST00000362273 69 ntBASIC0.82□□□□□ -2.28
TRIM48Q8IWZ4 RNU6-340P-201ENST00000364005 107 ntBASIC0.82□□□□□ -2.28
TRIM48Q8IWZ4 RNU6-54P-201ENST00000365563 107 ntBASIC0.82□□□□□ -2.28
TRIM48Q8IWZ4 RNU6V-201ENST00000384105 107 ntBASIC0.82□□□□□ -2.28
TRIM48Q8IWZ4 RNU6-380P-201ENST00000410207 107 ntBASIC0.82□□□□□ -2.28
TRIM48Q8IWZ4 SCARNA18B-201ENST00000458806 135 ntBASIC0.82□□□□□ -2.28
TRIM48Q8IWZ4 NAMPTP3-201ENST00000569273 224 ntBASIC0.82□□□□□ -2.28
TRIM48Q8IWZ4 Y_RNA.788-201ENST00000622394 112 ntBASIC0.82□□□□□ -2.28
TRIM48Q8IWZ4 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
TRIM48Q8IWZ4 MIR548J-201ENST00000408833 112 ntBASIC0.81□□□□□ -2.28
TRIM48Q8IWZ4 RNU5B-6P-201ENST00000516765 68 ntBASIC0.81□□□□□ -2.28
TRIM48Q8IWZ4 RNU6-382P-201ENST00000365181 106 ntBASIC0.8□□□□□ -2.28
TRIM48Q8IWZ4 MIR216B-201ENST00000390186 82 ntBASIC0.8□□□□□ -2.28
TRIM48Q8IWZ4 RNU2-59P-201ENST00000410482 191 ntBASIC0.8□□□□□ -2.28
TRIM48Q8IWZ4 AC069271.1-201ENST00000445577 156 ntBASIC0.8□□□□□ -2.28
TRIM48Q8IWZ4 RNU6-303P-201ENST00000517091 106 ntBASIC0.8□□□□□ -2.28
TRIM48Q8IWZ4 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.8□□□□□ -2.28
TRIM48Q8IWZ4 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
TRIM48Q8IWZ4 RNU6-330P-201ENST00000363015 107 ntBASIC0.79□□□□□ -2.28
TRIM48Q8IWZ4 Y_RNA.118-201ENST00000363300 101 ntBASIC0.79□□□□□ -2.28
TRIM48Q8IWZ4 MIR146A-201ENST00000385201 99 ntBASIC0.79□□□□□ -2.28
TRIM48Q8IWZ4 MT-TY-201ENST00000387409 66 ntBASIC0.79□□□□□ -2.28
TRIM48Q8IWZ4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.79□□□□□ -2.28
TRIM48Q8IWZ4 snoU13.18-201ENST00000459483 104 ntBASIC0.79□□□□□ -2.28
TRIM48Q8IWZ4 CYP3A137P-201ENST00000562436 69 ntBASIC0.79□□□□□ -2.28
TRIM48Q8IWZ4 RNU6-110P-201ENST00000384508 104 ntBASIC0.78□□□□□ -2.28
TRIM48Q8IWZ4 Y_RNA.606-201ENST00000410579 103 ntBASIC0.78□□□□□ -2.28
TRIM48Q8IWZ4 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.78□□□□□ -2.28
TRIM48Q8IWZ4 RNU4-54P-201ENST00000516428 129 ntBASIC0.78□□□□□ -2.28
TRIM48Q8IWZ4 RNU6-1223P-201ENST00000517124 104 ntBASIC0.78□□□□□ -2.28
TRIM48Q8IWZ4 U6.81-201ENST00000612550 106 ntBASIC0.78□□□□□ -2.28
TRIM48Q8IWZ4 SNORA70.25-201ENST00000612741 95 ntBASIC0.77□□□□□ -2.29
TRIM48Q8IWZ4 RNU6-154P-201ENST00000384306 106 ntBASIC0.76□□□□□ -2.29
TRIM48Q8IWZ4 AC074348.1-201ENST00000426503 132 ntBASIC0.76□□□□□ -2.29
TRIM48Q8IWZ4 SNORD42B-201ENST00000458893 67 ntBASIC0.76□□□□□ -2.29
TRIM48Q8IWZ4 RNU6-807P-201ENST00000516805 107 ntBASIC0.76□□□□□ -2.29
TRIM48Q8IWZ4 AC018659.1-201ENST00000551083 169 ntBASIC0.76□□□□□ -2.29
TRIM48Q8IWZ4 AC145423.2-201ENST00000610631 239 ntBASIC0.76□□□□□ -2.29
TRIM48Q8IWZ4 U7.4-201ENST00000614961 63 ntBASIC0.76□□□□□ -2.29
TRIM48Q8IWZ4 MIR664A-201ENST00000626086 82 ntBASIC0.76□□□□□ -2.29
TRIM48Q8IWZ4 RNU6-495P-201ENST00000362995 107 ntBASIC0.75□□□□□ -2.29
TRIM48Q8IWZ4 SNORA40.8-201ENST00000411034 126 ntBASIC0.75□□□□□ -2.29
TRIM48Q8IWZ4 AC006210.1-201ENST00000424882 111 ntBASIC0.75□□□□□ -2.29
TRIM48Q8IWZ4 RNU6-351P-201ENST00000516097 100 ntBASIC0.75□□□□□ -2.29
TRIM48Q8IWZ4 AL590095.2-201ENST00000604136 117 ntBASIC0.75□□□□□ -2.29
TRIM48Q8IWZ4 MIR4662A-201ENST00000637499 67 ntBASIC0.75□□□□□ -2.29
TRIM48Q8IWZ4 SNORD118-201ENST00000363593 134 ntBASIC0.74□□□□□ -2.29
TRIM48Q8IWZ4 RNU6-681P-201ENST00000364012 104 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 240.6 ms