Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 Y_RNA.258-201ENST00000364613 105 ntBASIC0.39□□□□□ -2.35
NHLRC1Q6VVB1 RNA5SP517-201ENST00000364724 117 ntBASIC0.39□□□□□ -2.35
NHLRC1Q6VVB1 RNU6-1126P-201ENST00000384002 107 ntBASIC0.39□□□□□ -2.35
NHLRC1Q6VVB1 SNORD116-22-201ENST00000384430 92 ntBASIC0.39□□□□□ -2.35
NHLRC1Q6VVB1 RNU6-1152P-201ENST00000384576 107 ntBASIC0.39□□□□□ -2.35
NHLRC1Q6VVB1 AC022137.1-201ENST00000483735 151 ntBASIC0.39□□□□□ -2.35
NHLRC1Q6VVB1 RNU6-287P-201ENST00000516230 98 ntBASIC0.39□□□□□ -2.35
NHLRC1Q6VVB1 Y_RNA.681-201ENST00000516445 113 ntBASIC0.39□□□□□ -2.35
NHLRC1Q6VVB1 MIR4536-1-201ENST00000583537 88 ntBASIC0.39□□□□□ -2.35
NHLRC1Q6VVB1 MIR3140-201ENST00000583685 90 ntBASIC0.39□□□□□ -2.35
NHLRC1Q6VVB1 AC104996.3-201ENST00000590718 94 ntBASIC0.39□□□□□ -2.35
NHLRC1Q6VVB1 AC006254.2-201ENST00000603259 279 ntBASIC0.39□□□□□ -2.35
NHLRC1Q6VVB1 RNU6-573P-201ENST00000383938 106 ntBASIC0.38□□□□□ -2.35
NHLRC1Q6VVB1 MIR519E-201ENST00000385075 84 ntBASIC0.38□□□□□ -2.35
NHLRC1Q6VVB1 SNORD41.1-201ENST00000391000 69 ntBASIC0.38□□□□□ -2.35
NHLRC1Q6VVB1 RNU6-466P-201ENST00000391224 103 ntBASIC0.38□□□□□ -2.35
NHLRC1Q6VVB1 SCARNA16.5-201ENST00000517114 183 ntBASIC0.38□□□□□ -2.35
NHLRC1Q6VVB1 MIR4752-201ENST00000579672 72 ntBASIC0.38□□□□□ -2.35
NHLRC1Q6VVB1 MIR5588-201ENST00000581890 63 ntBASIC0.38□□□□□ -2.35
NHLRC1Q6VVB1 SNORA25.18-201ENST00000607153 114 ntBASIC0.38□□□□□ -2.35
NHLRC1Q6VVB1 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.38□□□□□ -2.35
NHLRC1Q6VVB1 RNA5SP173-201ENST00000364857 136 ntBASIC0.37□□□□□ -2.35
NHLRC1Q6VVB1 VTRNA1-3-201ENST00000365645 89 ntBASIC0.37□□□□□ -2.35
NHLRC1Q6VVB1 SNORD101-201ENST00000384027 73 ntBASIC0.37□□□□□ -2.35
NHLRC1Q6VVB1 RNU6-811P-201ENST00000384069 107 ntBASIC0.37□□□□□ -2.35
NHLRC1Q6VVB1 SNORA24B-201ENST00000384176 131 ntBASIC0.37□□□□□ -2.35
NHLRC1Q6VVB1 SNORA8.2-201ENST00000384372 139 ntBASIC0.37□□□□□ -2.35
NHLRC1Q6VVB1 MIR450A2-201ENST00000385022 100 ntBASIC0.37□□□□□ -2.35
NHLRC1Q6VVB1 RNU6-269P-201ENST00000391077 97 ntBASIC0.37□□□□□ -2.35
NHLRC1Q6VVB1 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
NHLRC1Q6VVB1 MIR1197-201ENST00000408818 88 ntBASIC0.37□□□□□ -2.35
NHLRC1Q6VVB1 Y_RNA.596-201ENST00000410462 109 ntBASIC0.37□□□□□ -2.35
NHLRC1Q6VVB1 AC093423.1-201ENST00000440817 142 ntBASIC0.37□□□□□ -2.35
NHLRC1Q6VVB1 snoU13.17-201ENST00000458802 104 ntBASIC0.37□□□□□ -2.35
NHLRC1Q6VVB1 MIR2113-201ENST00000459007 91 ntBASIC0.37□□□□□ -2.35
NHLRC1Q6VVB1 RNU6-469P-201ENST00000516253 101 ntBASIC0.37□□□□□ -2.35
NHLRC1Q6VVB1 SNORA18.5-201ENST00000516616 101 ntBASIC0.37□□□□□ -2.35
NHLRC1Q6VVB1 Y_RNA.491-201ENST00000384417 107 ntBASIC0.36□□□□□ -2.35
NHLRC1Q6VVB1 Y_RNA.611-201ENST00000410682 108 ntBASIC0.36□□□□□ -2.35
NHLRC1Q6VVB1 RNU6-65P-201ENST00000516332 98 ntBASIC0.36□□□□□ -2.35
NHLRC1Q6VVB1 RNA5SP268-201ENST00000516828 124 ntBASIC0.36□□□□□ -2.35
NHLRC1Q6VVB1 AC140658.3-201ENST00000567603 271 ntBASIC0.36□□□□□ -2.35
NHLRC1Q6VVB1 AL162376.1-201ENST00000624117 175 ntBASIC0.36□□□□□ -2.35
NHLRC1Q6VVB1 Y_RNA.178-201ENST00000363832 102 ntBASIC0.35□□□□□ -2.35
NHLRC1Q6VVB1 RNU6-478P-201ENST00000363904 110 ntBASIC0.35□□□□□ -2.35
NHLRC1Q6VVB1 RNY1P1-201ENST00000364372 112 ntBASIC0.35□□□□□ -2.35
NHLRC1Q6VVB1 MIR519C-201ENST00000385053 87 ntBASIC0.35□□□□□ -2.35
NHLRC1Q6VVB1 MIR451A-201ENST00000385059 72 ntBASIC0.35□□□□□ -2.35
NHLRC1Q6VVB1 SNORA40.8-201ENST00000411034 126 ntBASIC0.35□□□□□ -2.35
NHLRC1Q6VVB1 RNU6-1052P-201ENST00000411398 104 ntBASIC0.35□□□□□ -2.35
NHLRC1Q6VVB1 AC069271.1-201ENST00000445577 156 ntBASIC0.35□□□□□ -2.35
NHLRC1Q6VVB1 RNA5SP484-201ENST00000458857 111 ntBASIC0.35□□□□□ -2.35
NHLRC1Q6VVB1 RNU6-1232P-201ENST00000516299 86 ntBASIC0.35□□□□□ -2.35
NHLRC1Q6VVB1 SNORA25.13-201ENST00000516395 103 ntBASIC0.35□□□□□ -2.35
NHLRC1Q6VVB1 RNU7-13P-201ENST00000516413 62 ntBASIC0.35□□□□□ -2.35
NHLRC1Q6VVB1 RNU6-719P-201ENST00000516671 104 ntBASIC0.35□□□□□ -2.35
NHLRC1Q6VVB1 MIR4796-201ENST00000580742 81 ntBASIC0.35□□□□□ -2.35
NHLRC1Q6VVB1 SNORA70.25-201ENST00000612741 95 ntBASIC0.35□□□□□ -2.35
NHLRC1Q6VVB1 MIR6755-201ENST00000619993 66 ntBASIC0.35□□□□□ -2.35
NHLRC1Q6VVB1 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.35□□□□□ -2.35
NHLRC1Q6VVB1 AC067863.3-201ENST00000624172 122 ntBASIC0.35□□□□□ -2.35
NHLRC1Q6VVB1 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.34□□□□□ -2.35
NHLRC1Q6VVB1 SNORD118-201ENST00000363593 134 ntBASIC0.34□□□□□ -2.36
NHLRC1Q6VVB1 RNU6-1051P-201ENST00000365471 102 ntBASIC0.34□□□□□ -2.36
NHLRC1Q6VVB1 Y_RNA.532-201ENST00000384590 113 ntBASIC0.34□□□□□ -2.36
NHLRC1Q6VVB1 SNORA26.2-201ENST00000390922 122 ntBASIC0.34□□□□□ -2.36
NHLRC1Q6VVB1 RNU6-935P-201ENST00000410371 100 ntBASIC0.34□□□□□ -2.36
NHLRC1Q6VVB1 AL450471.1-201ENST00000447509 127 ntBASIC0.34□□□□□ -2.36
NHLRC1Q6VVB1 RNU7-171P-201ENST00000459581 62 ntBASIC0.34□□□□□ -2.36
NHLRC1Q6VVB1 RNU6-863P-201ENST00000515989 104 ntBASIC0.34□□□□□ -2.36
NHLRC1Q6VVB1 RNA5SP134-201ENST00000516492 96 ntBASIC0.34□□□□□ -2.36
NHLRC1Q6VVB1 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.34□□□□□ -2.36
NHLRC1Q6VVB1 RNU6-228P-201ENST00000362700 106 ntBASIC0.33□□□□□ -2.36
NHLRC1Q6VVB1 RNU6-624P-201ENST00000363411 107 ntBASIC0.33□□□□□ -2.36
NHLRC1Q6VVB1 RNA5SP62-201ENST00000363457 110 ntBASIC0.33□□□□□ -2.36
NHLRC1Q6VVB1 RNU6-1327P-201ENST00000365302 105 ntBASIC0.33□□□□□ -2.36
NHLRC1Q6VVB1 MIR617-201ENST00000385030 97 ntBASIC0.33□□□□□ -2.36
NHLRC1Q6VVB1 MIR1236-201ENST00000408340 102 ntBASIC0.33□□□□□ -2.36
NHLRC1Q6VVB1 MIR1302-4-201ENST00000408701 150 ntBASIC0.33□□□□□ -2.36
NHLRC1Q6VVB1 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.33□□□□□ -2.36
NHLRC1Q6VVB1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.33□□□□□ -2.36
NHLRC1Q6VVB1 SNORA68.3-201ENST00000515906 83 ntBASIC0.33□□□□□ -2.36
NHLRC1Q6VVB1 RNA5SP227-201ENST00000516184 113 ntBASIC0.33□□□□□ -2.36
NHLRC1Q6VVB1 RNU6-135P-201ENST00000516769 101 ntBASIC0.33□□□□□ -2.36
NHLRC1Q6VVB1 IGLL4P-201ENST00000614590 133 ntBASIC0.33□□□□□ -2.36
NHLRC1Q6VVB1 MIR1245B-201ENST00000636115 69 ntBASIC0.33□□□□□ -2.36
NHLRC1Q6VVB1 MIRLET7D-201ENST00000362263 87 ntBASIC0.32□□□□□ -2.36
NHLRC1Q6VVB1 RNU6-1229P-201ENST00000364295 107 ntBASIC0.32□□□□□ -2.36
NHLRC1Q6VVB1 Y_RNA.313-201ENST00000365095 103 ntBASIC0.32□□□□□ -2.36
NHLRC1Q6VVB1 Y_RNA.316-201ENST00000365118 111 ntBASIC0.32□□□□□ -2.36
NHLRC1Q6VVB1 RNU6-1276P-201ENST00000365372 104 ntBASIC0.32□□□□□ -2.36
NHLRC1Q6VVB1 SNORD115-44-201ENST00000365391 82 ntBASIC0.32□□□□□ -2.36
NHLRC1Q6VVB1 RNU6-54P-201ENST00000365563 107 ntBASIC0.32□□□□□ -2.36
NHLRC1Q6VVB1 Y_RNA.433-201ENST00000384089 102 ntBASIC0.32□□□□□ -2.36
NHLRC1Q6VVB1 RNU6-820P-201ENST00000384273 107 ntBASIC0.32□□□□□ -2.36
NHLRC1Q6VVB1 MIR518A1-201ENST00000385068 85 ntBASIC0.32□□□□□ -2.36
NHLRC1Q6VVB1 AC093729.1-201ENST00000513074 128 ntBASIC0.32□□□□□ -2.36
NHLRC1Q6VVB1 FGF7P7-201ENST00000514120 227 ntBASIC0.32□□□□□ -2.36
NHLRC1Q6VVB1 RNA5SP395-201ENST00000516567 118 ntBASIC0.32□□□□□ -2.36
NHLRC1Q6VVB1 MIR103A1-201ENST00000362165 78 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 213 ms