Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 RNU1-17P-201ENST00000363022 152 ntBASIC2.25□□□□□ -2.05
TRAF7Q6Q0C0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
TRAF7Q6Q0C0 RNA5SP233-201ENST00000459153 113 ntBASIC2.25□□□□□ -2.05
TRAF7Q6Q0C0 SNORA31.2-201ENST00000516019 134 ntBASIC2.25□□□□□ -2.05
TRAF7Q6Q0C0 RNU5B-6P-201ENST00000516765 68 ntBASIC2.25□□□□□ -2.05
TRAF7Q6Q0C0 MIR3198-2-201ENST00000577868 80 ntBASIC2.25□□□□□ -2.05
TRAF7Q6Q0C0 MIR3664-201ENST00000579074 99 ntBASIC2.25□□□□□ -2.05
TRAF7Q6Q0C0 MIR302D-201ENST00000362275 68 ntBASIC2.24□□□□□ -2.05
TRAF7Q6Q0C0 Y_RNA.32-201ENST00000362589 110 ntBASIC2.24□□□□□ -2.05
TRAF7Q6Q0C0 MIR519A2-201ENST00000384990 87 ntBASIC2.24□□□□□ -2.05
TRAF7Q6Q0C0 uc_338.16-201ENST00000621804 95 ntBASIC2.24□□□□□ -2.05
TRAF7Q6Q0C0 AC067863.3-201ENST00000624172 122 ntBASIC2.24□□□□□ -2.05
TRAF7Q6Q0C0 RNU6-485P-201ENST00000363475 107 ntBASIC2.23□□□□□ -2.05
TRAF7Q6Q0C0 MIR758-201ENST00000390227 88 ntBASIC2.23□□□□□ -2.05
TRAF7Q6Q0C0 RNU7-102P-201ENST00000458948 62 ntBASIC2.23□□□□□ -2.05
TRAF7Q6Q0C0 MIR4676-201ENST00000583078 72 ntBASIC2.23□□□□□ -2.05
TRAF7Q6Q0C0 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.23□□□□□ -2.05
TRAF7Q6Q0C0 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.23□□□□□ -2.05
TRAF7Q6Q0C0 MIR6840-201ENST00000611937 71 ntBASIC2.23□□□□□ -2.05
TRAF7Q6Q0C0 AC090617.8-201ENST00000623339 167 ntBASIC2.23□□□□□ -2.05
TRAF7Q6Q0C0 AC079804.2-201ENST00000490376 200 ntBASIC2.22□□□□□ -2.05
TRAF7Q6Q0C0 RNU7-151P-201ENST00000516930 53 ntBASIC2.22□□□□□ -2.05
TRAF7Q6Q0C0 AL359821.1-201ENST00000605519 182 ntBASIC2.22□□□□□ -2.05
TRAF7Q6Q0C0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC2.22□□□□□ -2.05
TRAF7Q6Q0C0 SNORA63.6-201ENST00000364921 119 ntBASIC2.21□□□□□ -2.06
TRAF7Q6Q0C0 MIR517C-201ENST00000385103 95 ntBASIC2.21□□□□□ -2.06
TRAF7Q6Q0C0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.21□□□□□ -2.06
TRAF7Q6Q0C0 HMGN2P19-201ENST00000425149 265 ntBASIC2.21□□□□□ -2.06
TRAF7Q6Q0C0 RNA5SP182-201ENST00000516064 82 ntBASIC2.21□□□□□ -2.06
TRAF7Q6Q0C0 Y_RNA.676-201ENST00000516393 96 ntBASIC2.21□□□□□ -2.06
TRAF7Q6Q0C0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.21□□□□□ -2.06
TRAF7Q6Q0C0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TRAF7Q6Q0C0 MIR329-2-201ENST00000385029 84 ntBASIC2.2□□□□□ -2.06
TRAF7Q6Q0C0 SNORA17.3-201ENST00000391159 129 ntBASIC2.2□□□□□ -2.06
TRAF7Q6Q0C0 AC027335.2-201ENST00000624030 375 ntBASIC2.2□□□□□ -2.06
TRAF7Q6Q0C0 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC2.19□□□□□ -2.06
TRAF7Q6Q0C0 MIR583-201ENST00000384846 75 ntBASIC2.19□□□□□ -2.06
TRAF7Q6Q0C0 MIR5694-201ENST00000581190 76 ntBASIC2.19□□□□□ -2.06
TRAF7Q6Q0C0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
TRAF7Q6Q0C0 RNU1-141P-201ENST00000364623 158 ntBASIC2.18□□□□□ -2.06
TRAF7Q6Q0C0 SNORD113.3-201ENST00000364630 78 ntBASIC2.18□□□□□ -2.06
TRAF7Q6Q0C0 MIR582-201ENST00000365731 98 ntBASIC2.18□□□□□ -2.06
TRAF7Q6Q0C0 RNU4-52P-201ENST00000384209 138 ntBASIC2.18□□□□□ -2.06
TRAF7Q6Q0C0 MIR938-201ENST00000401216 83 ntBASIC2.18□□□□□ -2.06
TRAF7Q6Q0C0 AC036111.3-201ENST00000526389 112 ntBASIC2.18□□□□□ -2.06
TRAF7Q6Q0C0 AL512310.8-201ENST00000550183 120 ntBASIC2.18□□□□□ -2.06
TRAF7Q6Q0C0 AP000553.5-201ENST00000641933 54 ntBASIC2.18□□□□□ -2.06
TRAF7Q6Q0C0 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TRAF7Q6Q0C0 MIR29B1-201ENST00000385015 81 ntBASIC2.17□□□□□ -2.06
TRAF7Q6Q0C0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
TRAF7Q6Q0C0 SNORD41.1-201ENST00000391000 69 ntBASIC2.17□□□□□ -2.06
TRAF7Q6Q0C0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAF7Q6Q0C0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TRAF7Q6Q0C0 RNU6-598P-201ENST00000364017 105 ntBASIC2.16□□□□□ -2.06
TRAF7Q6Q0C0 RNU6-945P-201ENST00000383947 107 ntBASIC2.16□□□□□ -2.06
TRAF7Q6Q0C0 MIR1255B2-201ENST00000408618 67 ntBASIC2.16□□□□□ -2.06
TRAF7Q6Q0C0 RNU7-40P-201ENST00000516397 64 ntBASIC2.16□□□□□ -2.06
TRAF7Q6Q0C0 MIR4422-201ENST00000581938 83 ntBASIC2.16□□□□□ -2.06
TRAF7Q6Q0C0 U6.96-201ENST00000636425 70 ntBASIC2.16□□□□□ -2.06
TRAF7Q6Q0C0 MIR548E-201ENST00000408287 88 ntBASIC2.15□□□□□ -2.07
TRAF7Q6Q0C0 AC108667.1-201ENST00000428618 249 ntBASIC2.15□□□□□ -2.07
TRAF7Q6Q0C0 AC003989.2-201ENST00000440224 169 ntBASIC2.15□□□□□ -2.07
TRAF7Q6Q0C0 SCARNA17.3-201ENST00000516381 125 ntBASIC2.15□□□□□ -2.07
TRAF7Q6Q0C0 RN7SKP88-201ENST00000516847 250 ntBASIC2.15□□□□□ -2.07
TRAF7Q6Q0C0 7SK.8-201ENST00000612110 250 ntBASIC2.15□□□□□ -2.07
TRAF7Q6Q0C0 7SK.11-201ENST00000615477 250 ntBASIC2.15□□□□□ -2.07
TRAF7Q6Q0C0 7SK.13-201ENST00000622040 250 ntBASIC2.15□□□□□ -2.07
TRAF7Q6Q0C0 U2.18-201ENST00000622185 84 ntBASIC2.15□□□□□ -2.07
TRAF7Q6Q0C0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
TRAF7Q6Q0C0 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
TRAF7Q6Q0C0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.14□□□□□ -2.07
TRAF7Q6Q0C0 Y_RNA.174-201ENST00000363781 105 ntBASIC2.14□□□□□ -2.07
TRAF7Q6Q0C0 RNU6-828P-201ENST00000364876 107 ntBASIC2.14□□□□□ -2.07
TRAF7Q6Q0C0 RNU6-458P-201ENST00000384179 107 ntBASIC2.14□□□□□ -2.07
TRAF7Q6Q0C0 MIR125B1-201ENST00000385236 88 ntBASIC2.14□□□□□ -2.07
TRAF7Q6Q0C0 MIR652-201ENST00000385278 98 ntBASIC2.14□□□□□ -2.07
TRAF7Q6Q0C0 RNU7-56P-201ENST00000458744 62 ntBASIC2.14□□□□□ -2.07
TRAF7Q6Q0C0 AC104435.1-201ENST00000483483 166 ntBASIC2.14□□□□□ -2.07
TRAF7Q6Q0C0 RNU6-165P-201ENST00000517170 99 ntBASIC2.14□□□□□ -2.07
TRAF7Q6Q0C0 MIR4498-201ENST00000577599 66 ntBASIC2.14□□□□□ -2.07
TRAF7Q6Q0C0 MIR4448-201ENST00000584360 86 ntBASIC2.14□□□□□ -2.07
TRAF7Q6Q0C0 U6.58-201ENST00000613107 107 ntBASIC2.14□□□□□ -2.07
TRAF7Q6Q0C0 Y_RNA.338-201ENST00000365320 114 ntBASIC2.13□□□□□ -2.07
TRAF7Q6Q0C0 Y_RNA.345-201ENST00000365384 92 ntBASIC2.13□□□□□ -2.07
TRAF7Q6Q0C0 RNA5SP37-201ENST00000365420 130 ntBASIC2.13□□□□□ -2.07
TRAF7Q6Q0C0 RNU1-78P-201ENST00000391248 165 ntBASIC2.13□□□□□ -2.07
TRAF7Q6Q0C0 RNU6-1326P-201ENST00000391262 107 ntBASIC2.13□□□□□ -2.07
TRAF7Q6Q0C0 RNA5SP489-201ENST00000410986 109 ntBASIC2.13□□□□□ -2.07
TRAF7Q6Q0C0 AL356379.1-201ENST00000414105 126 ntBASIC2.13□□□□□ -2.07
TRAF7Q6Q0C0 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.13□□□□□ -2.07
TRAF7Q6Q0C0 MIR4804-201ENST00000581683 73 ntBASIC2.13□□□□□ -2.07
TRAF7Q6Q0C0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TRAF7Q6Q0C0 RNU6-974P-201ENST00000384099 108 ntBASIC2.12□□□□□ -2.07
TRAF7Q6Q0C0 MIR9-3-201ENST00000385084 90 ntBASIC2.12□□□□□ -2.07
TRAF7Q6Q0C0 MIR516B1-201ENST00000385211 90 ntBASIC2.12□□□□□ -2.07
TRAF7Q6Q0C0 MIR676-201ENST00000390702 67 ntBASIC2.12□□□□□ -2.07
TRAF7Q6Q0C0 AC008834.1-201ENST00000511612 175 ntBASIC2.12□□□□□ -2.07
TRAF7Q6Q0C0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TRAF7Q6Q0C0 AL136317.1-201ENST00000612653 226 ntBASIC2.11□□□□□ -2.07
TRAF7Q6Q0C0 AC243829.3-201ENST00000622177 108 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 208.1 ms