Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 RPS29P1-201ENST00000465274 159 ntBASIC1.33□□□□□ -2.2
CNKSR3Q6P9H4 RNU7-13P-201ENST00000516413 62 ntBASIC1.33□□□□□ -2.2
CNKSR3Q6P9H4 RNA5SP61-201ENST00000516453 100 ntBASIC1.33□□□□□ -2.2
CNKSR3Q6P9H4 RNA5SP480-201ENST00000516840 109 ntBASIC1.33□□□□□ -2.2
CNKSR3Q6P9H4 RNU6-1057P-201ENST00000517162 102 ntBASIC1.33□□□□□ -2.2
CNKSR3Q6P9H4 AC005520.4-201ENST00000604337 90 ntBASIC1.33□□□□□ -2.2
CNKSR3Q6P9H4 SNORD12-201ENST00000391002 90 ntBASIC1.32□□□□□ -2.2
CNKSR3Q6P9H4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.32□□□□□ -2.2
CNKSR3Q6P9H4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
CNKSR3Q6P9H4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CNKSR3Q6P9H4 AC002429.1-201ENST00000437672 148 ntBASIC1.31□□□□□ -2.2
CNKSR3Q6P9H4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.31□□□□□ -2.2
CNKSR3Q6P9H4 MIR6515-201ENST00000619843 57 ntBASIC1.31□□□□□ -2.2
CNKSR3Q6P9H4 MIR6767-201ENST00000637302 66 ntBASIC1.31□□□□□ -2.2
CNKSR3Q6P9H4 Y_RNA.174-201ENST00000363781 105 ntBASIC1.3□□□□□ -2.2
CNKSR3Q6P9H4 RNU6-471P-201ENST00000383944 106 ntBASIC1.3□□□□□ -2.2
CNKSR3Q6P9H4 SNORD116-24-201ENST00000384549 92 ntBASIC1.3□□□□□ -2.2
CNKSR3Q6P9H4 RNU6-604P-201ENST00000390917 100 ntBASIC1.3□□□□□ -2.2
CNKSR3Q6P9H4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.3□□□□□ -2.2
CNKSR3Q6P9H4 RNU6-881P-201ENST00000516813 102 ntBASIC1.3□□□□□ -2.2
CNKSR3Q6P9H4 RNU6-1223P-201ENST00000517124 104 ntBASIC1.3□□□□□ -2.2
CNKSR3Q6P9H4 MIR151B-201ENST00000584249 96 ntBASIC1.3□□□□□ -2.2
CNKSR3Q6P9H4 MIR6788-201ENST00000618842 66 ntBASIC1.3□□□□□ -2.2
CNKSR3Q6P9H4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CNKSR3Q6P9H4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
CNKSR3Q6P9H4 MIR618-201ENST00000385287 98 ntBASIC1.29□□□□□ -2.2
CNKSR3Q6P9H4 RNU6-630P-201ENST00000391258 106 ntBASIC1.29□□□□□ -2.2
CNKSR3Q6P9H4 RNU7-104P-201ENST00000459398 79 ntBASIC1.29□□□□□ -2.2
CNKSR3Q6P9H4 RNU6-274P-201ENST00000459566 107 ntBASIC1.29□□□□□ -2.2
CNKSR3Q6P9H4 AC087343.1-201ENST00000477341 475 ntBASIC1.29□□□□□ -2.2
CNKSR3Q6P9H4 MIR4295-201ENST00000585286 85 ntBASIC1.29□□□□□ -2.2
CNKSR3Q6P9H4 AL136317.1-201ENST00000612653 226 ntBASIC1.29□□□□□ -2.2
CNKSR3Q6P9H4 MIR8053-201ENST00000613344 75 ntBASIC1.29□□□□□ -2.2
CNKSR3Q6P9H4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.29□□□□□ -2.2
CNKSR3Q6P9H4 SNORD113.1-201ENST00000363280 73 ntBASIC1.28□□□□□ -2.2
CNKSR3Q6P9H4 RNU6-895P-201ENST00000384125 103 ntBASIC1.28□□□□□ -2.2
CNKSR3Q6P9H4 MIR519E-201ENST00000385075 84 ntBASIC1.28□□□□□ -2.2
CNKSR3Q6P9H4 MIR644A-201ENST00000385262 94 ntBASIC1.28□□□□□ -2.2
CNKSR3Q6P9H4 AC244098.3-201ENST00000424803 96 ntBASIC1.28□□□□□ -2.2
CNKSR3Q6P9H4 AC068338.1-201ENST00000565567 176 ntBASIC1.28□□□□□ -2.2
CNKSR3Q6P9H4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
CNKSR3Q6P9H4 RNU6-495P-201ENST00000362995 107 ntBASIC1.27□□□□□ -2.21
CNKSR3Q6P9H4 RNU6-939P-201ENST00000384634 107 ntBASIC1.27□□□□□ -2.21
CNKSR3Q6P9H4 MIR617-201ENST00000385030 97 ntBASIC1.27□□□□□ -2.21
CNKSR3Q6P9H4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.27□□□□□ -2.21
CNKSR3Q6P9H4 AC002350.1-201ENST00000490759 375 ntBASIC1.27□□□□□ -2.21
CNKSR3Q6P9H4 NAMPTP3-201ENST00000569273 224 ntBASIC1.27□□□□□ -2.21
CNKSR3Q6P9H4 Y_RNA.443-201ENST00000384135 111 ntBASIC1.26□□□□□ -2.21
CNKSR3Q6P9H4 SNORD75.2-201ENST00000408784 58 ntBASIC1.26□□□□□ -2.21
CNKSR3Q6P9H4 MIR548J-201ENST00000408833 112 ntBASIC1.26□□□□□ -2.21
CNKSR3Q6P9H4 AC067940.1-201ENST00000458411 300 ntBASIC1.26□□□□□ -2.21
CNKSR3Q6P9H4 RNU6-752P-201ENST00000516376 102 ntBASIC1.26□□□□□ -2.21
CNKSR3Q6P9H4 RNA5SP404-201ENST00000517118 132 ntBASIC1.26□□□□□ -2.21
CNKSR3Q6P9H4 MIR548O2-201ENST00000616090 70 ntBASIC1.26□□□□□ -2.21
CNKSR3Q6P9H4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CNKSR3Q6P9H4 AL691482.2-201ENST00000457453 84 ntBASIC1.25□□□□□ -2.21
CNKSR3Q6P9H4 RNU7-24P-201ENST00000458867 62 ntBASIC1.25□□□□□ -2.21
CNKSR3Q6P9H4 PVT1_3.1-201ENST00000620853 95 ntBASIC1.25□□□□□ -2.21
CNKSR3Q6P9H4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
CNKSR3Q6P9H4 RNU6-1216P-201ENST00000362590 107 ntBASIC1.24□□□□□ -2.21
CNKSR3Q6P9H4 SNORD114-26-201ENST00000363543 72 ntBASIC1.24□□□□□ -2.21
CNKSR3Q6P9H4 RNU6-54P-201ENST00000365563 107 ntBASIC1.24□□□□□ -2.21
CNKSR3Q6P9H4 MIR9-2-201ENST00000384838 87 ntBASIC1.24□□□□□ -2.21
CNKSR3Q6P9H4 RNU6-982P-201ENST00000516216 102 ntBASIC1.24□□□□□ -2.21
CNKSR3Q6P9H4 MIR7974-201ENST00000615835 79 ntBASIC1.24□□□□□ -2.21
CNKSR3Q6P9H4 AC067863.3-201ENST00000624172 122 ntBASIC1.24□□□□□ -2.21
CNKSR3Q6P9H4 SNORA25.4-201ENST00000363666 124 ntBASIC1.23□□□□□ -2.21
CNKSR3Q6P9H4 RNU6-1039P-201ENST00000383931 107 ntBASIC1.23□□□□□ -2.21
CNKSR3Q6P9H4 SNORD89-201ENST00000390981 114 ntBASIC1.23□□□□□ -2.21
CNKSR3Q6P9H4 AL109933.3-201ENST00000619095 188 ntBASIC1.23□□□□□ -2.21
CNKSR3Q6P9H4 AC244669.1-204ENST00000621564 178 ntBASIC1.23□□□□□ -2.21
CNKSR3Q6P9H4 RNU1-124P-201ENST00000363861 145 ntBASIC1.22□□□□□ -2.21
CNKSR3Q6P9H4 RNA5SP117-201ENST00000365294 118 ntBASIC1.22□□□□□ -2.21
CNKSR3Q6P9H4 SNORD28-201ENST00000384706 75 ntBASIC1.22□□□□□ -2.21
CNKSR3Q6P9H4 MIR19B1-201ENST00000384829 87 ntBASIC1.22□□□□□ -2.21
CNKSR3Q6P9H4 SNORD42B-201ENST00000458893 67 ntBASIC1.22□□□□□ -2.21
CNKSR3Q6P9H4 MIR203A-201ENST00000384836 110 ntBASIC1.21□□□□□ -2.22
CNKSR3Q6P9H4 MIR598-201ENST00000384868 97 ntBASIC1.21□□□□□ -2.22
CNKSR3Q6P9H4 MIR216B-201ENST00000390186 82 ntBASIC1.21□□□□□ -2.22
CNKSR3Q6P9H4 SNORD41.1-201ENST00000391000 69 ntBASIC1.21□□□□□ -2.22
CNKSR3Q6P9H4 AC093423.1-201ENST00000440817 142 ntBASIC1.21□□□□□ -2.22
CNKSR3Q6P9H4 RNU6-1110P-201ENST00000516462 101 ntBASIC1.21□□□□□ -2.22
CNKSR3Q6P9H4 MIR6509-201ENST00000614603 85 ntBASIC1.21□□□□□ -2.22
CNKSR3Q6P9H4 RNU6V-201ENST00000384105 107 ntBASIC1.2□□□□□ -2.22
CNKSR3Q6P9H4 SNORD105-201ENST00000386910 85 ntBASIC1.2□□□□□ -2.22
CNKSR3Q6P9H4 MIR4639-201ENST00000584938 69 ntBASIC1.2□□□□□ -2.22
CNKSR3Q6P9H4 MIR200A-201ENST00000384875 90 ntBASIC1.19□□□□□ -2.22
CNKSR3Q6P9H4 SNORD18A-201ENST00000363753 72 ntBASIC1.18□□□□□ -2.22
CNKSR3Q6P9H4 RNU6-1335P-201ENST00000365426 107 ntBASIC1.18□□□□□ -2.22
CNKSR3Q6P9H4 SNORA40.17-201ENST00000517256 115 ntBASIC1.18□□□□□ -2.22
CNKSR3Q6P9H4 RNU6-726P-201ENST00000364680 107 ntBASIC1.17□□□□□ -2.22
CNKSR3Q6P9H4 U7.7-201ENST00000459276 60 ntBASIC1.17□□□□□ -2.22
CNKSR3Q6P9H4 SNORD124-201ENST00000459577 104 ntBASIC1.17□□□□□ -2.22
CNKSR3Q6P9H4 RNU6-135P-201ENST00000516769 101 ntBASIC1.17□□□□□ -2.22
CNKSR3Q6P9H4 RNA5SP47-201ENST00000517230 109 ntBASIC1.17□□□□□ -2.22
CNKSR3Q6P9H4 MIR4511-201ENST00000582784 87 ntBASIC1.17□□□□□ -2.22
CNKSR3Q6P9H4 MIR3657-201ENST00000584818 117 ntBASIC1.17□□□□□ -2.22
CNKSR3Q6P9H4 MIR6779-201ENST00000617283 64 ntBASIC1.17□□□□□ -2.22
CNKSR3Q6P9H4 SNORD114-24-201ENST00000365029 72 ntBASIC1.16□□□□□ -2.22
CNKSR3Q6P9H4 MIR3678-201ENST00000578455 94 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms