Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RNA5SP215-201ENST00000363440 122 ntBASIC2.01□□□□□ -2.09
RC3H1Q5TC82 RNU6-994P-201ENST00000410507 111 ntBASIC2.01□□□□□ -2.09
RC3H1Q5TC82 RNU7-104P-201ENST00000459398 79 ntBASIC2.01□□□□□ -2.09
RC3H1Q5TC82 Y_RNA.722-201ENST00000517279 114 ntBASIC2.01□□□□□ -2.09
RC3H1Q5TC82 AL157834.3-201ENST00000615543 103 ntBASIC2.01□□□□□ -2.09
RC3H1Q5TC82 MIR934-201ENST00000401241 83 ntBASIC2□□□□□ -2.09
RC3H1Q5TC82 SNORD42B-201ENST00000458893 67 ntBASIC2□□□□□ -2.09
RC3H1Q5TC82 RN7SKP88-201ENST00000516847 250 ntBASIC2□□□□□ -2.09
RC3H1Q5TC82 RNA5SP364-201ENST00000516938 78 ntBASIC2□□□□□ -2.09
RC3H1Q5TC82 MIR4421-201ENST00000578133 69 ntBASIC2□□□□□ -2.09
RC3H1Q5TC82 7SK.8-201ENST00000612110 250 ntBASIC2□□□□□ -2.09
RC3H1Q5TC82 7SK.11-201ENST00000615477 250 ntBASIC2□□□□□ -2.09
RC3H1Q5TC82 7SK.13-201ENST00000622040 250 ntBASIC2□□□□□ -2.09
RC3H1Q5TC82 MIR7978-201ENST00000636158 59 ntBASIC2□□□□□ -2.09
RC3H1Q5TC82 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
RC3H1Q5TC82 MIR100-201ENST00000385259 80 ntBASIC1.99□□□□□ -2.09
RC3H1Q5TC82 AC067863.3-201ENST00000624172 122 ntBASIC1.99□□□□□ -2.09
RC3H1Q5TC82 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RC3H1Q5TC82 MIR1-1-201ENST00000362147 71 ntBASIC1.98□□□□□ -2.09
RC3H1Q5TC82 SNORA2.1-201ENST00000363089 137 ntBASIC1.98□□□□□ -2.09
RC3H1Q5TC82 RNU1-123P-201ENST00000458950 160 ntBASIC1.98□□□□□ -2.09
RC3H1Q5TC82 RNU6-656P-201ENST00000516785 107 ntBASIC1.98□□□□□ -2.09
RC3H1Q5TC82 RNU6V-201ENST00000384105 107 ntBASIC1.97□□□□□ -2.09
RC3H1Q5TC82 SNORA80D-201ENST00000384488 135 ntBASIC1.97□□□□□ -2.09
RC3H1Q5TC82 RNU6-808P-201ENST00000391233 108 ntBASIC1.97□□□□□ -2.09
RC3H1Q5TC82 snoU13.18-201ENST00000459483 104 ntBASIC1.97□□□□□ -2.09
RC3H1Q5TC82 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.97□□□□□ -2.09
RC3H1Q5TC82 MIR520F-201ENST00000384824 87 ntBASIC1.96□□□□□ -2.1
RC3H1Q5TC82 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.96□□□□□ -2.1
RC3H1Q5TC82 MIR1323-201ENST00000408090 73 ntBASIC1.96□□□□□ -2.1
RC3H1Q5TC82 RNU7-90P-201ENST00000459216 62 ntBASIC1.96□□□□□ -2.1
RC3H1Q5TC82 RNU6-1089P-201ENST00000516473 104 ntBASIC1.96□□□□□ -2.1
RC3H1Q5TC82 RNU6-122P-201ENST00000516818 107 ntBASIC1.96□□□□□ -2.1
RC3H1Q5TC82 SNORA31.24-201ENST00000517232 57 ntBASIC1.96□□□□□ -2.1
RC3H1Q5TC82 MIR3938-201ENST00000582157 103 ntBASIC1.96□□□□□ -2.1
RC3H1Q5TC82 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.95□□□□□ -2.1
RC3H1Q5TC82 SNORA40.17-201ENST00000517256 115 ntBASIC1.95□□□□□ -2.1
RC3H1Q5TC82 MIR6739-201ENST00000622461 75 ntBASIC1.95□□□□□ -2.1
RC3H1Q5TC82 Y_RNA.224-201ENST00000364308 111 ntBASIC1.94□□□□□ -2.1
RC3H1Q5TC82 RNU7-74P-201ENST00000459104 62 ntBASIC1.94□□□□□ -2.1
RC3H1Q5TC82 RNU6-92P-201ENST00000605893 104 ntBASIC1.94□□□□□ -2.1
RC3H1Q5TC82 RNU6-910P-201ENST00000390844 107 ntBASIC1.93□□□□□ -2.1
RC3H1Q5TC82 RNU1-78P-201ENST00000391248 165 ntBASIC1.93□□□□□ -2.1
RC3H1Q5TC82 RNA5SP147-201ENST00000516493 109 ntBASIC1.93□□□□□ -2.1
RC3H1Q5TC82 MIR4285-201ENST00000581001 85 ntBASIC1.93□□□□□ -2.1
RC3H1Q5TC82 RNU6-990P-201ENST00000364385 104 ntBASIC1.92□□□□□ -2.1
RC3H1Q5TC82 RNU6-302P-201ENST00000365249 107 ntBASIC1.92□□□□□ -2.1
RC3H1Q5TC82 AL136317.1-201ENST00000612653 226 ntBASIC1.92□□□□□ -2.1
RC3H1Q5TC82 SNORD113-4-201ENST00000364802 75 ntBASIC1.91□□□□□ -2.1
RC3H1Q5TC82 RNU6-936P-201ENST00000384005 107 ntBASIC1.91□□□□□ -2.1
RC3H1Q5TC82 SNORD79.1-201ENST00000516069 84 ntBASIC1.91□□□□□ -2.1
RC3H1Q5TC82 RNA5SP102-201ENST00000516865 106 ntBASIC1.91□□□□□ -2.1
RC3H1Q5TC82 AL353770.2-201ENST00000620024 78 ntBASIC1.91□□□□□ -2.1
RC3H1Q5TC82 MT-TY-201ENST00000387409 66 ntBASIC1.9□□□□□ -2.11
RC3H1Q5TC82 MIR1827-201ENST00000408549 66 ntBASIC1.9□□□□□ -2.11
RC3H1Q5TC82 SNORD41.1-201ENST00000391000 69 ntBASIC1.89□□□□□ -2.11
RC3H1Q5TC82 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.89□□□□□ -2.11
RC3H1Q5TC82 RNU1-92P-201ENST00000517017 135 ntBASIC1.89□□□□□ -2.11
RC3H1Q5TC82 MIR4452-201ENST00000583004 71 ntBASIC1.89□□□□□ -2.11
RC3H1Q5TC82 MIR548V-201ENST00000584165 80 ntBASIC1.89□□□□□ -2.11
RC3H1Q5TC82 RMST_2.1-201ENST00000617263 136 ntBASIC1.89□□□□□ -2.11
RC3H1Q5TC82 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.89□□□□□ -2.11
RC3H1Q5TC82 RNU6-1184P-201ENST00000384588 108 ntBASIC1.88□□□□□ -2.11
RC3H1Q5TC82 MIR644A-201ENST00000385262 94 ntBASIC1.88□□□□□ -2.11
RC3H1Q5TC82 SNORA75.1-201ENST00000391130 148 ntBASIC1.88□□□□□ -2.11
RC3H1Q5TC82 RNU6-135P-201ENST00000516769 101 ntBASIC1.88□□□□□ -2.11
RC3H1Q5TC82 MIR3122-201ENST00000577243 73 ntBASIC1.88□□□□□ -2.11
RC3H1Q5TC82 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
RC3H1Q5TC82 SNORD60.1-201ENST00000362451 73 ntBASIC1.87□□□□□ -2.11
RC3H1Q5TC82 Y_RNA.250-201ENST00000364542 110 ntBASIC1.87□□□□□ -2.11
RC3H1Q5TC82 RNA5SP117-201ENST00000365294 118 ntBASIC1.87□□□□□ -2.11
RC3H1Q5TC82 AL354695.1-201ENST00000427935 228 ntBASIC1.87□□□□□ -2.11
RC3H1Q5TC82 AC002350.1-201ENST00000490759 375 ntBASIC1.87□□□□□ -2.11
RC3H1Q5TC82 AC018659.1-201ENST00000551083 169 ntBASIC1.87□□□□□ -2.11
RC3H1Q5TC82 MIR4460-201ENST00000577862 86 ntBASIC1.87□□□□□ -2.11
RC3H1Q5TC82 MIR4422-201ENST00000581938 83 ntBASIC1.87□□□□□ -2.11
RC3H1Q5TC82 MIR4639-201ENST00000584938 69 ntBASIC1.87□□□□□ -2.11
RC3H1Q5TC82 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
RC3H1Q5TC82 RNU6-1162P-201ENST00000384443 104 ntBASIC1.86□□□□□ -2.11
RC3H1Q5TC82 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.86□□□□□ -2.11
RC3H1Q5TC82 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.86□□□□□ -2.11
RC3H1Q5TC82 AC244669.1-204ENST00000621564 178 ntBASIC1.86□□□□□ -2.11
RC3H1Q5TC82 RNU6-902P-201ENST00000517212 91 ntBASIC1.85□□□□□ -2.11
RC3H1Q5TC82 SNORD114-4-201ENST00000363962 75 ntBASIC1.84□□□□□ -2.11
RC3H1Q5TC82 SNORD28-201ENST00000384706 75 ntBASIC1.84□□□□□ -2.11
RC3H1Q5TC82 AL157398.1-201ENST00000452981 186 ntBASIC1.84□□□□□ -2.11
RC3H1Q5TC82 MIR521-2-201ENST00000384818 87 ntBASIC1.83□□□□□ -2.12
RC3H1Q5TC82 MIR630-201ENST00000384957 97 ntBASIC1.83□□□□□ -2.12
RC3H1Q5TC82 RNU1-141P-201ENST00000364623 158 ntBASIC1.82□□□□□ -2.12
RC3H1Q5TC82 Y_RNA.540-201ENST00000384638 111 ntBASIC1.82□□□□□ -2.12
RC3H1Q5TC82 MIR548C-201ENST00000384815 97 ntBASIC1.82□□□□□ -2.12
RC3H1Q5TC82 MIR1304-201ENST00000408243 91 ntBASIC1.82□□□□□ -2.12
RC3H1Q5TC82 MIR548L-201ENST00000408303 86 ntBASIC1.82□□□□□ -2.12
RC3H1Q5TC82 SNORD114-22-201ENST00000365423 72 ntBASIC1.81□□□□□ -2.12
RC3H1Q5TC82 RNU6-469P-201ENST00000516253 101 ntBASIC1.81□□□□□ -2.12
RC3H1Q5TC82 SNORA70.22-201ENST00000517160 124 ntBASIC1.81□□□□□ -2.12
RC3H1Q5TC82 RNU6-726P-201ENST00000364680 107 ntBASIC1.8□□□□□ -2.12
RC3H1Q5TC82 SNORD12-201ENST00000391002 90 ntBASIC1.8□□□□□ -2.12
RC3H1Q5TC82 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.79□□□□□ -2.12
RC3H1Q5TC82 MIR517B-201ENST00000385102 67 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms