Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 Y_RNA.355-201ENST00000365462 98 ntBASIC2.32□□□□□ -2.04
VARS2Q5ST30 AC048334.1-201ENST00000477975 159 ntBASIC2.32□□□□□ -2.04
VARS2Q5ST30 MIR4639-201ENST00000584938 69 ntBASIC2.32□□□□□ -2.04
VARS2Q5ST30 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
VARS2Q5ST30 RNU6-135P-201ENST00000516769 101 ntBASIC2.31□□□□□ -2.04
VARS2Q5ST30 AC244669.1-204ENST00000621564 178 ntBASIC2.31□□□□□ -2.04
VARS2Q5ST30 U6.103-201ENST00000637085 61 ntBASIC2.31□□□□□ -2.04
VARS2Q5ST30 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.3□□□□□ -2.04
VARS2Q5ST30 AC098934.3-201ENST00000430450 190 ntBASIC2.3□□□□□ -2.04
VARS2Q5ST30 RNU6-518P-201ENST00000516056 96 ntBASIC2.3□□□□□ -2.04
VARS2Q5ST30 SCARNA17.3-201ENST00000516381 125 ntBASIC2.3□□□□□ -2.04
VARS2Q5ST30 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
VARS2Q5ST30 RNU6-726P-201ENST00000364680 107 ntBASIC2.29□□□□□ -2.04
VARS2Q5ST30 MIR520F-201ENST00000384824 87 ntBASIC2.29□□□□□ -2.04
VARS2Q5ST30 MIR100-201ENST00000385259 80 ntBASIC2.29□□□□□ -2.04
VARS2Q5ST30 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VARS2Q5ST30 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
VARS2Q5ST30 RNA5SP276-201ENST00000362580 94 ntBASIC2.28□□□□□ -2.04
VARS2Q5ST30 Y_RNA.363-201ENST00000365529 113 ntBASIC2.28□□□□□ -2.04
VARS2Q5ST30 MIR582-201ENST00000365731 98 ntBASIC2.28□□□□□ -2.04
VARS2Q5ST30 MIR644A-201ENST00000385262 94 ntBASIC2.28□□□□□ -2.04
VARS2Q5ST30 SNORA48.3-201ENST00000391081 134 ntBASIC2.28□□□□□ -2.04
VARS2Q5ST30 MIR548L-201ENST00000408303 86 ntBASIC2.28□□□□□ -2.04
VARS2Q5ST30 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.28□□□□□ -2.04
VARS2Q5ST30 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
VARS2Q5ST30 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
VARS2Q5ST30 SNORD1A-201ENST00000364968 72 ntBASIC2.26□□□□□ -2.05
VARS2Q5ST30 SNORA8.2-201ENST00000384372 139 ntBASIC2.26□□□□□ -2.05
VARS2Q5ST30 MIR548E-201ENST00000408287 88 ntBASIC2.26□□□□□ -2.05
VARS2Q5ST30 MIR1-1-201ENST00000362147 71 ntBASIC2.25□□□□□ -2.05
VARS2Q5ST30 MIR652-201ENST00000385278 98 ntBASIC2.25□□□□□ -2.05
VARS2Q5ST30 AC108667.1-201ENST00000428618 249 ntBASIC2.25□□□□□ -2.05
VARS2Q5ST30 RNU7-21P-201ENST00000459430 62 ntBASIC2.25□□□□□ -2.05
VARS2Q5ST30 AC079140.2-201ENST00000506193 142 ntBASIC2.25□□□□□ -2.05
VARS2Q5ST30 snoU13.31-201ENST00000607291 104 ntBASIC2.25□□□□□ -2.05
VARS2Q5ST30 RNU6-1065P-201ENST00000384513 106 ntBASIC2.24□□□□□ -2.05
VARS2Q5ST30 AL591704.2-201ENST00000421658 181 ntBASIC2.24□□□□□ -2.05
VARS2Q5ST30 HMGN2P38-201ENST00000423806 265 ntBASIC2.24□□□□□ -2.05
VARS2Q5ST30 RNA5SP484-201ENST00000458857 111 ntBASIC2.24□□□□□ -2.05
VARS2Q5ST30 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
VARS2Q5ST30 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
VARS2Q5ST30 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
VARS2Q5ST30 MIR499A-201ENST00000384903 122 ntBASIC2.23□□□□□ -2.05
VARS2Q5ST30 MIR519A2-201ENST00000384990 87 ntBASIC2.23□□□□□ -2.05
VARS2Q5ST30 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
VARS2Q5ST30 AC079804.2-201ENST00000490376 200 ntBASIC2.23□□□□□ -2.05
VARS2Q5ST30 AC002350.1-201ENST00000490759 375 ntBASIC2.23□□□□□ -2.05
VARS2Q5ST30 AL512310.8-201ENST00000550183 120 ntBASIC2.23□□□□□ -2.05
VARS2Q5ST30 AC090617.8-201ENST00000623339 167 ntBASIC2.23□□□□□ -2.05
VARS2Q5ST30 U6.96-201ENST00000636425 70 ntBASIC2.23□□□□□ -2.05
VARS2Q5ST30 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
VARS2Q5ST30 SNORD33-201ENST00000362761 85 ntBASIC2.22□□□□□ -2.05
VARS2Q5ST30 Y_RNA.407-201ENST00000383986 113 ntBASIC2.22□□□□□ -2.05
VARS2Q5ST30 RNU6-1206P-201ENST00000516339 103 ntBASIC2.22□□□□□ -2.05
VARS2Q5ST30 MIR6845-201ENST00000613182 61 ntBASIC2.22□□□□□ -2.05
VARS2Q5ST30 RMST_2.1-201ENST00000617263 136 ntBASIC2.22□□□□□ -2.05
VARS2Q5ST30 MIRLET7G-201ENST00000362280 84 ntBASIC2.21□□□□□ -2.06
VARS2Q5ST30 Y_RNA.109-201ENST00000363215 102 ntBASIC2.21□□□□□ -2.06
VARS2Q5ST30 snoU13.9-201ENST00000458927 103 ntBASIC2.21□□□□□ -2.06
VARS2Q5ST30 SNORA44.1-201ENST00000517031 108 ntBASIC2.21□□□□□ -2.06
VARS2Q5ST30 MIR3937-201ENST00000580135 106 ntBASIC2.21□□□□□ -2.06
VARS2Q5ST30 MIR4713-201ENST00000582691 75 ntBASIC2.21□□□□□ -2.06
VARS2Q5ST30 MIR583-201ENST00000384846 75 ntBASIC2.2□□□□□ -2.06
VARS2Q5ST30 MIR1827-201ENST00000408549 66 ntBASIC2.2□□□□□ -2.06
VARS2Q5ST30 RNU7-160P-201ENST00000516660 62 ntBASIC2.2□□□□□ -2.06
VARS2Q5ST30 RNU6-894P-201ENST00000517094 105 ntBASIC2.2□□□□□ -2.06
VARS2Q5ST30 MIR548AG1-201ENST00000579932 66 ntBASIC2.2□□□□□ -2.06
VARS2Q5ST30 Y_RNA.783-201ENST00000613546 102 ntBASIC2.2□□□□□ -2.06
VARS2Q5ST30 AC243829.3-201ENST00000622177 108 ntBASIC2.2□□□□□ -2.06
VARS2Q5ST30 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VARS2Q5ST30 MIR378A-201ENST00000362177 66 ntBASIC2.19□□□□□ -2.06
VARS2Q5ST30 RNU6-1204P-201ENST00000363948 107 ntBASIC2.19□□□□□ -2.06
VARS2Q5ST30 RNU6-716P-201ENST00000365621 103 ntBASIC2.19□□□□□ -2.06
VARS2Q5ST30 MIR489-201ENST00000384923 84 ntBASIC2.19□□□□□ -2.06
VARS2Q5ST30 MIR516B1-201ENST00000385211 90 ntBASIC2.19□□□□□ -2.06
VARS2Q5ST30 MIR934-201ENST00000401241 83 ntBASIC2.19□□□□□ -2.06
VARS2Q5ST30 RNU6-321P-201ENST00000410912 106 ntBASIC2.19□□□□□ -2.06
VARS2Q5ST30 RNA5SP47-201ENST00000517230 109 ntBASIC2.19□□□□□ -2.06
VARS2Q5ST30 MIR4287-201ENST00000579398 78 ntBASIC2.19□□□□□ -2.06
VARS2Q5ST30 7SK.11-201ENST00000615477 250 ntBASIC2.19□□□□□ -2.06
VARS2Q5ST30 MIR8070-201ENST00000616510 88 ntBASIC2.19□□□□□ -2.06
VARS2Q5ST30 MIR1255B2-201ENST00000408618 67 ntBASIC2.18□□□□□ -2.06
VARS2Q5ST30 AC104435.1-201ENST00000483483 166 ntBASIC2.18□□□□□ -2.06
VARS2Q5ST30 RNU6-469P-201ENST00000516253 101 ntBASIC2.18□□□□□ -2.06
VARS2Q5ST30 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
VARS2Q5ST30 RNU6-822P-201ENST00000362707 106 ntBASIC2.17□□□□□ -2.06
VARS2Q5ST30 RNU4-52P-201ENST00000384209 138 ntBASIC2.17□□□□□ -2.06
VARS2Q5ST30 SNORA80D-201ENST00000384488 135 ntBASIC2.17□□□□□ -2.06
VARS2Q5ST30 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.17□□□□□ -2.06
VARS2Q5ST30 RNU7-90P-201ENST00000459216 62 ntBASIC2.17□□□□□ -2.06
VARS2Q5ST30 MIR548AE1-201ENST00000583292 70 ntBASIC2.17□□□□□ -2.06
VARS2Q5ST30 MIR5002-201ENST00000584713 97 ntBASIC2.17□□□□□ -2.06
VARS2Q5ST30 AP000553.5-201ENST00000641933 54 ntBASIC2.17□□□□□ -2.06
VARS2Q5ST30 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
VARS2Q5ST30 Y_RNA.69-201ENST00000362885 109 ntBASIC2.16□□□□□ -2.06
VARS2Q5ST30 SNORD18A-201ENST00000363753 72 ntBASIC2.16□□□□□ -2.06
VARS2Q5ST30 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
VARS2Q5ST30 MIR429-201ENST00000362106 83 ntBASIC2.15□□□□□ -2.07
VARS2Q5ST30 SNORD23.1-201ENST00000408212 104 ntBASIC2.15□□□□□ -2.07
VARS2Q5ST30 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 183.6 ms