Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 RNU6-161P-201ENST00000363051 106 ntBASIC0.07□□□□□ -2.4
RUNDC3AQ59EK9 RNA5SP325-201ENST00000363756 130 ntBASIC0.07□□□□□ -2.4
RUNDC3AQ59EK9 RNU6-755P-201ENST00000364400 103 ntBASIC0.07□□□□□ -2.4
RUNDC3AQ59EK9 Y_RNA.239-201ENST00000364444 113 ntBASIC0.07□□□□□ -2.4
RUNDC3AQ59EK9 RNU6-132P-201ENST00000383863 107 ntBASIC0.07□□□□□ -2.4
RUNDC3AQ59EK9 SNORD20-201ENST00000384550 80 ntBASIC0.07□□□□□ -2.4
RUNDC3AQ59EK9 RNU6-1057P-201ENST00000517162 102 ntBASIC0.07□□□□□ -2.4
RUNDC3AQ59EK9 MIR548AI-201ENST00000579940 88 ntBASIC0.07□□□□□ -2.4
RUNDC3AQ59EK9 MIR6718-201ENST00000616153 80 ntBASIC0.07□□□□□ -2.4
RUNDC3AQ59EK9 Y_RNA.540-201ENST00000384638 111 ntBASIC0.06□□□□□ -2.4
RUNDC3AQ59EK9 MIR451A-201ENST00000385059 72 ntBASIC0.06□□□□□ -2.4
RUNDC3AQ59EK9 MIR610-201ENST00000385139 96 ntBASIC0.06□□□□□ -2.4
RUNDC3AQ59EK9 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.06□□□□□ -2.4
RUNDC3AQ59EK9 MIR8087-201ENST00000612745 78 ntBASIC0.06□□□□□ -2.4
RUNDC3AQ59EK9 MIR6779-201ENST00000617283 64 ntBASIC0.06□□□□□ -2.4
RUNDC3AQ59EK9 SNORD114-5-201ENST00000362928 70 ntBASIC0.05□□□□□ -2.4
RUNDC3AQ59EK9 Y_RNA.258-201ENST00000364613 105 ntBASIC0.05□□□□□ -2.4
RUNDC3AQ59EK9 RNU6-652P-201ENST00000365488 107 ntBASIC0.05□□□□□ -2.4
RUNDC3AQ59EK9 Y_RNA.544-201ENST00000384650 113 ntBASIC0.05□□□□□ -2.4
RUNDC3AQ59EK9 RNU6-519P-201ENST00000410590 108 ntBASIC0.05□□□□□ -2.4
RUNDC3AQ59EK9 SNORA63.4-201ENST00000362763 126 ntBASIC0.04□□□□□ -2.4
RUNDC3AQ59EK9 RNU6-919P-201ENST00000516731 104 ntBASIC0.04□□□□□ -2.4
RUNDC3AQ59EK9 RNU5B-6P-201ENST00000516765 68 ntBASIC0.04□□□□□ -2.4
RUNDC3AQ59EK9 RNA5SP330-201ENST00000517096 96 ntBASIC0.04□□□□□ -2.4
RUNDC3AQ59EK9 RNU6-158P-201ENST00000517104 100 ntBASIC0.04□□□□□ -2.4
RUNDC3AQ59EK9 MIR3064-201ENST00000581130 66 ntBASIC0.04□□□□□ -2.4
RUNDC3AQ59EK9 AC023932.2-201ENST00000603176 175 ntBASIC0.04□□□□□ -2.4
RUNDC3AQ59EK9 SNORD116-10-201ENST00000363791 102 ntBASIC0.03□□□□□ -2.4
RUNDC3AQ59EK9 MIR593-201ENST00000384856 100 ntBASIC0.03□□□□□ -2.4
RUNDC3AQ59EK9 MIR145-201ENST00000384967 88 ntBASIC0.03□□□□□ -2.4
RUNDC3AQ59EK9 SCARNA11.2-201ENST00000517183 154 ntBASIC0.03□□□□□ -2.4
RUNDC3AQ59EK9 MIR548AE1-201ENST00000583292 70 ntBASIC0.03□□□□□ -2.4
RUNDC3AQ59EK9 MIR548O2-201ENST00000616090 70 ntBASIC0.03□□□□□ -2.4
RUNDC3AQ59EK9 U7.3-201ENST00000616123 62 ntBASIC0.03□□□□□ -2.4
RUNDC3AQ59EK9 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.03□□□□□ -2.4
RUNDC3AQ59EK9 MIR330-201ENST00000362196 94 ntBASIC0.02□□□□□ -2.41
RUNDC3AQ59EK9 MIR516B1-201ENST00000385211 90 ntBASIC0.02□□□□□ -2.41
RUNDC3AQ59EK9 MIR216B-201ENST00000390186 82 ntBASIC0.02□□□□□ -2.41
RUNDC3AQ59EK9 MIR876-201ENST00000401147 81 ntBASIC0.02□□□□□ -2.41
RUNDC3AQ59EK9 RNU6-162P-201ENST00000516228 103 ntBASIC0.02□□□□□ -2.41
RUNDC3AQ59EK9 Y_RNA.677-201ENST00000516401 85 ntBASIC0.02□□□□□ -2.41
RUNDC3AQ59EK9 MIR4743-201ENST00000584576 69 ntBASIC0.02□□□□□ -2.41
RUNDC3AQ59EK9 AC104996.3-201ENST00000590718 94 ntBASIC0.02□□□□□ -2.41
RUNDC3AQ59EK9 MIR548U-201ENST00000390728 81 ntBASIC0.01□□□□□ -2.41
RUNDC3AQ59EK9 SNORA75.1-201ENST00000391130 148 ntBASIC0.01□□□□□ -2.41
RUNDC3AQ59EK9 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
RUNDC3AQ59EK9 MTATP8P2-201ENST00000435212 202 ntBASIC0.01□□□□□ -2.41
RUNDC3AQ59EK9 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
RUNDC3AQ59EK9 AC084368.1-201ENST00000620935 65 ntBASIC0.01□□□□□ -2.41
RUNDC3AQ59EK9 RNU6-811P-201ENST00000384069 107 ntBASIC0□□□□□ -2.41
RUNDC3AQ59EK9 RNU6V-201ENST00000384105 107 ntBASIC0□□□□□ -2.41
RUNDC3AQ59EK9 MIR7-2-201ENST00000384970 110 ntBASIC0□□□□□ -2.41
RUNDC3AQ59EK9 MIR892B-201ENST00000401279 77 ntBASIC0□□□□□ -2.41
RUNDC3AQ59EK9 AL035461.1-201ENST00000421490 332 ntBASIC0□□□□□ -2.41
RUNDC3AQ59EK9 AC026421.1-201ENST00000519101 163 ntBASIC0□□□□□ -2.41
RUNDC3AQ59EK9 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.01□□□□□ -2.41
RUNDC3AQ59EK9 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.01□□□□□ -2.41
RUNDC3AQ59EK9 U3.27-201ENST00000391237 200 ntBASIC-0.01□□□□□ -2.41
RUNDC3AQ59EK9 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.01□□□□□ -2.41
RUNDC3AQ59EK9 MIR4290-201ENST00000583807 95 ntBASIC-0.01□□□□□ -2.41
RUNDC3AQ59EK9 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.01□□□□□ -2.41
RUNDC3AQ59EK9 uc_338.10-201ENST00000621872 182 ntBASIC-0.01□□□□□ -2.41
RUNDC3AQ59EK9 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.02□□□□□ -2.41
RUNDC3AQ59EK9 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.02□□□□□ -2.41
RUNDC3AQ59EK9 RNA5SP292-201ENST00000390974 118 ntBASIC-0.02□□□□□ -2.41
RUNDC3AQ59EK9 RNA5SP163-201ENST00000410304 99 ntBASIC-0.02□□□□□ -2.41
RUNDC3AQ59EK9 RNA5SP63-201ENST00000391225 112 ntBASIC-0.03□□□□□ -2.41
RUNDC3AQ59EK9 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.03□□□□□ -2.41
RUNDC3AQ59EK9 FGF7P7-201ENST00000514120 227 ntBASIC-0.03□□□□□ -2.41
RUNDC3AQ59EK9 AP001318.4-201ENST00000616637 121 ntBASIC-0.03□□□□□ -2.41
RUNDC3AQ59EK9 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.04□□□□□ -2.42
RUNDC3AQ59EK9 RNU6-147P-201ENST00000383983 107 ntBASIC-0.04□□□□□ -2.42
RUNDC3AQ59EK9 RNU6-44P-201ENST00000384045 107 ntBASIC-0.04□□□□□ -2.42
RUNDC3AQ59EK9 RNU6-154P-201ENST00000384306 106 ntBASIC-0.04□□□□□ -2.42
RUNDC3AQ59EK9 RNU7-188P-201ENST00000517063 64 ntBASIC-0.04□□□□□ -2.42
RUNDC3AQ59EK9 SNORD114-16-201ENST00000363044 70 ntBASIC-0.05□□□□□ -2.42
RUNDC3AQ59EK9 RNU4-32P-201ENST00000363404 141 ntBASIC-0.05□□□□□ -2.42
RUNDC3AQ59EK9 RNU6-54P-201ENST00000365563 107 ntBASIC-0.05□□□□□ -2.42
RUNDC3AQ59EK9 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.05□□□□□ -2.42
RUNDC3AQ59EK9 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.05□□□□□ -2.42
RUNDC3AQ59EK9 RNU6-719P-201ENST00000516671 104 ntBASIC-0.05□□□□□ -2.42
RUNDC3AQ59EK9 RNU6-180P-201ENST00000516697 61 ntBASIC-0.05□□□□□ -2.42
RUNDC3AQ59EK9 MIR5190-201ENST00000581537 80 ntBASIC-0.05□□□□□ -2.42
RUNDC3AQ59EK9 MIR2909-201ENST00000617113 69 ntBASIC-0.05□□□□□ -2.42
RUNDC3AQ59EK9 SNORA63.2-201ENST00000362603 126 ntBASIC-0.06□□□□□ -2.42
RUNDC3AQ59EK9 RNU7-165P-201ENST00000458864 60 ntBASIC-0.06□□□□□ -2.42
RUNDC3AQ59EK9 RNU7-159P-201ENST00000459284 62 ntBASIC-0.06□□□□□ -2.42
RUNDC3AQ59EK9 MIR3140-201ENST00000583685 90 ntBASIC-0.06□□□□□ -2.42
RUNDC3AQ59EK9 RN7SL660P-201ENST00000614852 299 ntBASIC-0.06□□□□□ -2.42
RUNDC3AQ59EK9 MIR6514-201ENST00000622549 70 ntBASIC-0.06□□□□□ -2.42
RUNDC3AQ59EK9 MIR2052-201ENST00000636055 55 ntBASIC-0.06□□□□□ -2.42
RUNDC3AQ59EK9 RNU6-929P-201ENST00000384429 107 ntBASIC-0.07□□□□□ -2.42
RUNDC3AQ59EK9 SNORD90-201ENST00000391145 111 ntBASIC-0.07□□□□□ -2.42
RUNDC3AQ59EK9 SNORA18.5-201ENST00000516616 101 ntBASIC-0.07□□□□□ -2.42
RUNDC3AQ59EK9 MIR4768-201ENST00000585270 74 ntBASIC-0.07□□□□□ -2.42
RUNDC3AQ59EK9 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-0.07□□□□□ -2.42
RUNDC3AQ59EK9 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.07□□□□□ -2.42
RUNDC3AQ59EK9 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.08□□□□□ -2.42
RUNDC3AQ59EK9 RNU6-32P-201ENST00000383948 107 ntBASIC-0.08□□□□□ -2.42
RUNDC3AQ59EK9 RNU6-13P-201ENST00000384248 107 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 174.4 ms