Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 MIR652-201ENST00000385278 98 ntBASIC3.02□□□□□ -1.93
NCBP3Q53F19 SNORA48.3-201ENST00000391081 134 ntBASIC3.02□□□□□ -1.93
NCBP3Q53F19 SCARNA17.3-201ENST00000516381 125 ntBASIC3.02□□□□□ -1.93
NCBP3Q53F19 RNU6-980P-201ENST00000516925 103 ntBASIC3.02□□□□□ -1.93
NCBP3Q53F19 RNU1-92P-201ENST00000517017 135 ntBASIC3.02□□□□□ -1.93
NCBP3Q53F19 RNU6-231P-201ENST00000517122 103 ntBASIC3.02□□□□□ -1.93
NCBP3Q53F19 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.02□□□□□ -1.93
NCBP3Q53F19 SNORA9.1-201ENST00000362412 131 ntBASIC3.01□□□□□ -1.93
NCBP3Q53F19 SNORD105-201ENST00000386910 85 ntBASIC3.01□□□□□ -1.93
NCBP3Q53F19 RNA5SP200-201ENST00000516360 103 ntBASIC3.01□□□□□ -1.93
NCBP3Q53F19 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC3.01□□□□□ -1.93
NCBP3Q53F19 RNA5SP289-201ENST00000362332 137 ntBASIC3□□□□□ -1.93
NCBP3Q53F19 MIR4448-201ENST00000584360 86 ntBASIC3□□□□□ -1.93
NCBP3Q53F19 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.99□□□□□ -1.93
NCBP3Q53F19 RNA5SP432-201ENST00000362480 116 ntBASIC2.99□□□□□ -1.93
NCBP3Q53F19 RNU6ATAC29P-201ENST00000408088 125 ntBASIC2.99□□□□□ -1.93
NCBP3Q53F19 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NCBP3Q53F19 SNORA25.8-201ENST00000364831 128 ntBASIC2.98□□□□□ -1.93
NCBP3Q53F19 Y_RNA.407-201ENST00000383986 113 ntBASIC2.98□□□□□ -1.93
NCBP3Q53F19 SNORD116.2-201ENST00000391251 93 ntBASIC2.98□□□□□ -1.93
NCBP3Q53F19 RNU6-1110P-201ENST00000516462 101 ntBASIC2.98□□□□□ -1.93
NCBP3Q53F19 RNU6-1246P-201ENST00000391064 107 ntBASIC2.97□□□□□ -1.93
NCBP3Q53F19 SCARNA16.5-201ENST00000517114 183 ntBASIC2.97□□□□□ -1.93
NCBP3Q53F19 SNORA3.2-201ENST00000408221 125 ntBASIC2.96□□□□□ -1.94
NCBP3Q53F19 AL356320.1-201ENST00000429616 163 ntBASIC2.96□□□□□ -1.94
NCBP3Q53F19 AL137847.3-201ENST00000611521 109 ntBASIC2.96□□□□□ -1.94
NCBP3Q53F19 DLEU2_4.2-201ENST00000616613 58 ntBASIC2.96□□□□□ -1.94
NCBP3Q53F19 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
NCBP3Q53F19 MIR582-201ENST00000365731 98 ntBASIC2.95□□□□□ -1.94
NCBP3Q53F19 U7.7-201ENST00000459276 60 ntBASIC2.95□□□□□ -1.94
NCBP3Q53F19 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.95□□□□□ -1.94
NCBP3Q53F19 RNU6-35P-201ENST00000384530 107 ntBASIC2.94□□□□□ -1.94
NCBP3Q53F19 RNU4-53P-201ENST00000410828 140 ntBASIC2.94□□□□□ -1.94
NCBP3Q53F19 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
NCBP3Q53F19 MIR517C-201ENST00000385103 95 ntBASIC2.93□□□□□ -1.94
NCBP3Q53F19 snoU13.26-201ENST00000459452 105 ntBASIC2.93□□□□□ -1.94
NCBP3Q53F19 AC104435.1-201ENST00000483483 166 ntBASIC2.93□□□□□ -1.94
NCBP3Q53F19 CYP3A54P-201ENST00000566950 75 ntBASIC2.93□□□□□ -1.94
NCBP3Q53F19 MIR7843-201ENST00000622274 79 ntBASIC2.93□□□□□ -1.94
NCBP3Q53F19 AL162376.1-201ENST00000624117 175 ntBASIC2.93□□□□□ -1.94
NCBP3Q53F19 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
NCBP3Q53F19 MIR548AE1-201ENST00000583292 70 ntBASIC2.92□□□□□ -1.94
NCBP3Q53F19 MIR4473-201ENST00000583731 91 ntBASIC2.92□□□□□ -1.94
NCBP3Q53F19 MIR5002-201ENST00000584713 97 ntBASIC2.92□□□□□ -1.94
NCBP3Q53F19 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
NCBP3Q53F19 RNU4-33P-201ENST00000364316 85 ntBASIC2.91□□□□□ -1.94
NCBP3Q53F19 RNU6ATAC2P-201ENST00000387943 126 ntBASIC2.91□□□□□ -1.94
NCBP3Q53F19 MIR3612-201ENST00000579753 87 ntBASIC2.91□□□□□ -1.94
NCBP3Q53F19 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
NCBP3Q53F19 MIR548E-201ENST00000408287 88 ntBASIC2.9□□□□□ -1.95
NCBP3Q53F19 U6.96-201ENST00000636425 70 ntBASIC2.9□□□□□ -1.95
NCBP3Q53F19 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.89□□□□□ -1.95
NCBP3Q53F19 RNA5SP425-201ENST00000410336 112 ntBASIC2.88□□□□□ -1.95
NCBP3Q53F19 MIR1273D-201ENST00000577266 86 ntBASIC2.88□□□□□ -1.95
NCBP3Q53F19 RNU6-930P-201ENST00000390938 100 ntBASIC2.87□□□□□ -1.95
NCBP3Q53F19 FABP5P4-201ENST00000437203 171 ntBASIC2.87□□□□□ -1.95
NCBP3Q53F19 MIR573-201ENST00000384964 99 ntBASIC2.86□□□□□ -1.95
NCBP3Q53F19 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
NCBP3Q53F19 MIR504-201ENST00000385065 83 ntBASIC2.85□□□□□ -1.95
NCBP3Q53F19 AC006210.1-201ENST00000424882 111 ntBASIC2.85□□□□□ -1.95
NCBP3Q53F19 RNA5SP227-201ENST00000516184 113 ntBASIC2.85□□□□□ -1.95
NCBP3Q53F19 MIR6132-201ENST00000622083 109 ntBASIC2.85□□□□□ -1.95
NCBP3Q53F19 MIR6873-201ENST00000622788 63 ntBASIC2.85□□□□□ -1.95
NCBP3Q53F19 SNORA25-201ENST00000384384 134 ntBASIC2.84□□□□□ -1.95
NCBP3Q53F19 AL021921.1-201ENST00000442774 93 ntBASIC2.84□□□□□ -1.95
NCBP3Q53F19 RNU6-518P-201ENST00000516056 96 ntBASIC2.84□□□□□ -1.95
NCBP3Q53F19 MIR4524B-201ENST00000581569 115 ntBASIC2.84□□□□□ -1.95
NCBP3Q53F19 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
NCBP3Q53F19 SNORA26.9-201ENST00000391322 122 ntBASIC2.83□□□□□ -1.96
NCBP3Q53F19 SNORD110-201ENST00000408189 75 ntBASIC2.83□□□□□ -1.96
NCBP3Q53F19 SNORA40.16-201ENST00000517238 121 ntBASIC2.83□□□□□ -1.96
NCBP3Q53F19 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC2.83□□□□□ -1.96
NCBP3Q53F19 MIR7110-201ENST00000612638 86 ntBASIC2.83□□□□□ -1.96
NCBP3Q53F19 Y_RNA.74-201ENST00000362911 99 ntBASIC2.82□□□□□ -1.96
NCBP3Q53F19 SNORD116-16-201ENST00000384533 92 ntBASIC2.82□□□□□ -1.96
NCBP3Q53F19 MIR527-201ENST00000385244 85 ntBASIC2.81□□□□□ -1.96
NCBP3Q53F19 RN7SKP223-201ENST00000410582 62 ntBASIC2.81□□□□□ -1.96
NCBP3Q53F19 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NCBP3Q53F19 MIR4769-201ENST00000584126 77 ntBASIC2.81□□□□□ -1.96
NCBP3Q53F19 AC012493.3-201ENST00000604494 112 ntBASIC2.81□□□□□ -1.96
NCBP3Q53F19 MIR219B-201ENST00000637023 88 ntBASIC2.81□□□□□ -1.96
NCBP3Q53F19 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
NCBP3Q53F19 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.8□□□□□ -1.96
NCBP3Q53F19 MIR6828-201ENST00000636181 60 ntBASIC2.8□□□□□ -1.96
NCBP3Q53F19 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
NCBP3Q53F19 MIRLET7G-201ENST00000362280 84 ntBASIC2.79□□□□□ -1.96
NCBP3Q53F19 MIR516B1-201ENST00000385211 90 ntBASIC2.79□□□□□ -1.96
NCBP3Q53F19 MIR4648-201ENST00000580107 72 ntBASIC2.79□□□□□ -1.96
NCBP3Q53F19 RNA5SP37-201ENST00000365420 130 ntBASIC2.78□□□□□ -1.96
NCBP3Q53F19 uc_338.20-201ENST00000621563 178 ntBASIC2.78□□□□□ -1.96
NCBP3Q53F19 RNA5SP327-201ENST00000362494 101 ntBASIC2.77□□□□□ -1.97
NCBP3Q53F19 MIR1289-2-201ENST00000408360 111 ntBASIC2.77□□□□□ -1.97
NCBP3Q53F19 snoU13.15-201ENST00000459407 104 ntBASIC2.77□□□□□ -1.97
NCBP3Q53F19 AC090617.8-201ENST00000623339 167 ntBASIC2.77□□□□□ -1.97
NCBP3Q53F19 Y_RNA.282-201ENST00000364793 102 ntBASIC2.74□□□□□ -1.97
NCBP3Q53F19 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
NCBP3Q53F19 MIR548X-201ENST00000580069 75 ntBASIC2.74□□□□□ -1.97
NCBP3Q53F19 AC243829.6-201ENST00000612652 106 ntBASIC2.74□□□□□ -1.97
NCBP3Q53F19 MIR1255B2-201ENST00000408618 67 ntBASIC2.73□□□□□ -1.97
NCBP3Q53F19 AL591806.2-201ENST00000433122 173 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms