Protein–RNA interactions for Protein: Q3V6T2

CCDC88A, Girdin, humanhuman

Predictions only

Length 1,871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88AQ3V6T2 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.58□□□□□ -2.66
CCDC88AQ3V6T2 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.58□□□□□ -2.66
CCDC88AQ3V6T2 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.58□□□□□ -2.66
CCDC88AQ3V6T2 RNU6-985P-201ENST00000410182 104 ntBASIC-1.58□□□□□ -2.66
CCDC88AQ3V6T2 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.58□□□□□ -2.66
CCDC88AQ3V6T2 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.59□□□□□ -2.66
CCDC88AQ3V6T2 MIR582-201ENST00000365731 98 ntBASIC-1.59□□□□□ -2.66
CCDC88AQ3V6T2 Y_RNA.431-201ENST00000384086 102 ntBASIC-1.59□□□□□ -2.66
CCDC88AQ3V6T2 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.59□□□□□ -2.66
CCDC88AQ3V6T2 SNORD75.2-201ENST00000408784 58 ntBASIC-1.59□□□□□ -2.66
CCDC88AQ3V6T2 MTATP6P29-201ENST00000415057 132 ntBASIC-1.59□□□□□ -2.66
CCDC88AQ3V6T2 Y_RNA.651-201ENST00000459380 103 ntBASIC-1.59□□□□□ -2.66
CCDC88AQ3V6T2 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-1.59□□□□□ -2.66
CCDC88AQ3V6T2 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.6□□□□□ -2.67
CCDC88AQ3V6T2 AC022028.1-201ENST00000412054 408 ntBASIC-1.6□□□□□ -2.67
CCDC88AQ3V6T2 RNU7-154P-201ENST00000516194 62 ntBASIC-1.6□□□□□ -2.67
CCDC88AQ3V6T2 MIR6818-201ENST00000621576 65 ntBASIC-1.6□□□□□ -2.67
CCDC88AQ3V6T2 RNU6-647P-201ENST00000364243 107 ntBASIC-1.6□□□□□ -2.67
CCDC88AQ3V6T2 RNU6-713P-201ENST00000384761 107 ntBASIC-1.6□□□□□ -2.67
CCDC88AQ3V6T2 RNU6-576P-201ENST00000390854 102 ntBASIC-1.6□□□□□ -2.67
CCDC88AQ3V6T2 SNORD58.1-201ENST00000391313 66 ntBASIC-1.6□□□□□ -2.67
CCDC88AQ3V6T2 RNA5SP136-201ENST00000410906 107 ntBASIC-1.6□□□□□ -2.67
CCDC88AQ3V6T2 RNU6-65P-201ENST00000516332 98 ntBASIC-1.6□□□□□ -2.67
CCDC88AQ3V6T2 SNORA63.6-201ENST00000364921 119 ntBASIC-1.61□□□□□ -2.67
CCDC88AQ3V6T2 RNU6-409P-201ENST00000384114 104 ntBASIC-1.61□□□□□ -2.67
CCDC88AQ3V6T2 MIR577-201ENST00000385196 96 ntBASIC-1.61□□□□□ -2.67
CCDC88AQ3V6T2 RNU6-1009P-201ENST00000390996 107 ntBASIC-1.61□□□□□ -2.67
CCDC88AQ3V6T2 MIR1302-6-201ENST00000408466 90 ntBASIC-1.61□□□□□ -2.67
CCDC88AQ3V6T2 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.62□□□□□ -2.67
CCDC88AQ3V6T2 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.62□□□□□ -2.67
CCDC88AQ3V6T2 RNU6-62P-201ENST00000516526 102 ntBASIC-1.62□□□□□ -2.67
CCDC88AQ3V6T2 RNU6-988P-201ENST00000519081 107 ntBASIC-1.62□□□□□ -2.67
CCDC88AQ3V6T2 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.63□□□□□ -2.67
CCDC88AQ3V6T2 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.63□□□□□ -2.67
CCDC88AQ3V6T2 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.63□□□□□ -2.67
CCDC88AQ3V6T2 MT-TW-201ENST00000387382 68 ntBASIC-1.63□□□□□ -2.67
CCDC88AQ3V6T2 Y_RNA.619-201ENST00000410951 90 ntBASIC-1.63□□□□□ -2.67
CCDC88AQ3V6T2 MIR4490-201ENST00000582647 84 ntBASIC-1.63□□□□□ -2.67
CCDC88AQ3V6T2 AC139792.2-201ENST00000624218 587 ntBASIC-1.63□□□□□ -2.67
CCDC88AQ3V6T2 RNU6-479P-201ENST00000516348 105 ntBASIC-1.63□□□□□ -2.67
CCDC88AQ3V6T2 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.64□□□□□ -2.67
CCDC88AQ3V6T2 RNU6-474P-201ENST00000384243 107 ntBASIC-1.64□□□□□ -2.67
CCDC88AQ3V6T2 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.64□□□□□ -2.67
CCDC88AQ3V6T2 RNU7-6P-201ENST00000516845 62 ntBASIC-1.64□□□□□ -2.67
CCDC88AQ3V6T2 RNU6-1137P-201ENST00000517073 99 ntBASIC-1.64□□□□□ -2.67
CCDC88AQ3V6T2 MIR4680-201ENST00000580906 66 ntBASIC-1.64□□□□□ -2.67
CCDC88AQ3V6T2 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.65□□□□□ -2.67
CCDC88AQ3V6T2 AC130289.1-201ENST00000577321 73 ntBASIC-1.65□□□□□ -2.67
CCDC88AQ3V6T2 MIR4520-1-201ENST00000582609 70 ntBASIC-1.65□□□□□ -2.67
CCDC88AQ3V6T2 AC090617.8-201ENST00000623339 167 ntBASIC-1.65□□□□□ -2.67
CCDC88AQ3V6T2 SNORD115-33-201ENST00000363723 82 ntBASIC-1.65□□□□□ -2.67
CCDC88AQ3V6T2 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.65□□□□□ -2.67
CCDC88AQ3V6T2 RNU6-260P-201ENST00000384092 107 ntBASIC-1.65□□□□□ -2.67
CCDC88AQ3V6T2 MT-TD-201ENST00000387419 68 ntBASIC-1.65□□□□□ -2.67
CCDC88AQ3V6T2 MIR6888-201ENST00000621977 67 ntBASIC-1.65□□□□□ -2.67
CCDC88AQ3V6T2 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.66□□□□□ -2.68
CCDC88AQ3V6T2 MIR548U-201ENST00000390728 81 ntBASIC-1.66□□□□□ -2.68
CCDC88AQ3V6T2 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.66□□□□□ -2.68
CCDC88AQ3V6T2 MIR4464-201ENST00000580818 92 ntBASIC-1.66□□□□□ -2.68
CCDC88AQ3V6T2 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.67□□□□□ -2.68
CCDC88AQ3V6T2 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.67□□□□□ -2.68
CCDC88AQ3V6T2 RNU6-118P-201ENST00000516552 102 ntBASIC-1.67□□□□□ -2.68
CCDC88AQ3V6T2 RNU6-762P-201ENST00000517107 102 ntBASIC-1.67□□□□□ -2.68
CCDC88AQ3V6T2 MIR4795-201ENST00000584182 89 ntBASIC-1.67□□□□□ -2.68
CCDC88AQ3V6T2 MIR6509-201ENST00000614603 85 ntBASIC-1.67□□□□□ -2.68
CCDC88AQ3V6T2 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.67□□□□□ -2.68
CCDC88AQ3V6T2 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.67□□□□□ -2.68
CCDC88AQ3V6T2 RNU7-85P-201ENST00000458851 63 ntBASIC-1.67□□□□□ -2.68
CCDC88AQ3V6T2 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.67□□□□□ -2.68
CCDC88AQ3V6T2 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.67□□□□□ -2.68
CCDC88AQ3V6T2 RNU6-832P-201ENST00000363319 107 ntBASIC-1.68□□□□□ -2.68
CCDC88AQ3V6T2 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.68□□□□□ -2.68
CCDC88AQ3V6T2 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.68□□□□□ -2.68
CCDC88AQ3V6T2 MIR3171-201ENST00000584270 74 ntBASIC-1.68□□□□□ -2.68
CCDC88AQ3V6T2 AL160413.1-201ENST00000622780 310 ntBASIC-1.68□□□□□ -2.68
CCDC88AQ3V6T2 MIR1255B2-201ENST00000408618 67 ntBASIC-1.69□□□□□ -2.68
CCDC88AQ3V6T2 SNORA19.1-201ENST00000410656 129 ntBASIC-1.69□□□□□ -2.68
CCDC88AQ3V6T2 RNU6-635P-201ENST00000516651 102 ntBASIC-1.69□□□□□ -2.68
CCDC88AQ3V6T2 AL513043.2-201ENST00000573941 143 ntBASIC-1.69□□□□□ -2.68
CCDC88AQ3V6T2 RNU6-239P-201ENST00000390990 99 ntBASIC-1.69□□□□□ -2.68
CCDC88AQ3V6T2 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.69□□□□□ -2.68
CCDC88AQ3V6T2 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.7□□□□□ -2.68
CCDC88AQ3V6T2 RNU6-132P-201ENST00000383863 107 ntBASIC-1.71□□□□□ -2.68
CCDC88AQ3V6T2 SNORA24B-201ENST00000384176 131 ntBASIC-1.71□□□□□ -2.68
CCDC88AQ3V6T2 MIR548D2-201ENST00000384955 97 ntBASIC-1.71□□□□□ -2.68
CCDC88AQ3V6T2 MIR521-2-201ENST00000384818 87 ntBASIC-1.71□□□□□ -2.68
CCDC88AQ3V6T2 RNU6-918P-201ENST00000391219 106 ntBASIC-1.71□□□□□ -2.68
CCDC88AQ3V6T2 RNU6-980P-201ENST00000516925 103 ntBASIC-1.71□□□□□ -2.68
CCDC88AQ3V6T2 AC068339.1-201ENST00000526965 141 ntBASIC-1.71□□□□□ -2.68
CCDC88AQ3V6T2 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.72□□□□□ -2.68
CCDC88AQ3V6T2 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.72□□□□□ -2.68
CCDC88AQ3V6T2 SNORD54-201ENST00000459159 67 ntBASIC-1.72□□□□□ -2.68
CCDC88AQ3V6T2 MIR3657-201ENST00000584818 117 ntBASIC-1.72□□□□□ -2.68
CCDC88AQ3V6T2 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.73□□□□□ -2.69
CCDC88AQ3V6T2 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.73□□□□□ -2.69
CCDC88AQ3V6T2 MIR519A2-201ENST00000384990 87 ntBASIC-1.73□□□□□ -2.69
CCDC88AQ3V6T2 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.73□□□□□ -2.69
CCDC88AQ3V6T2 MTND2P23-201ENST00000422990 651 ntBASIC-1.73□□□□□ -2.69
CCDC88AQ3V6T2 RNU4-71P-201ENST00000516258 113 ntBASIC-1.73□□□□□ -2.69
CCDC88AQ3V6T2 AC025521.1-201ENST00000621624 286 ntBASIC-1.73□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 231.5 ms